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Query: 2jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MMVGFGELKEEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIGGRHLast
1 -120.0002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model  100  1MMVGFGELKEEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIGGRH 227
2 -97.2005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  34  13EQTIFVIKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSSRDV----NDIRTSSGAFLD--DNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSR---SAANNRISTLVMYLNDVEEGGETFFPKL---------------NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYKPPG 220
3 -93.6005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  28  4SSSGLSHMEGFETSDRPGVCDGKYYEKIDGFLSDIECDVLINAAIKKGLIKSEVTENDPIKLDPKSRNSEQTWFMPGEHEVIDKIQKKTREFLNIDKYNFEDVQVARYKPGQYYYHHYDGDDCDDA---CPKDQRLATLMVYLKAPEEGGETDFPTL---------------KTKIKPKKGTSIFFWVADPTRKLYKETLHAGLPVKSGEKIIANQWIRAVK..... 222
4 -55.5003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  13  1..........MGSDKIENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQ---TSGAMATTRKRNQQLDKDDPGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIR-TDLSATLFLSEPENYQGGELVIQDTY-------------GQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMWLQSMVRDEGQ 196
5 -32.8006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  10  48..............DFDYTEICNDVYSF-PLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEDKQWHYVVFNYVAPFVNYKTKDINLAFVVKYDMQSELAPHHD-----------SSTYTLNIALNEYGKEYTAGGCEFIRHKF--------------IWQGQKVGYATIH-------AGKLLAYHRALPITSGKRYILVSFVN........ 229
6 -29.3004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  18  39.........................SQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQEDFECHFALYPPGAFYRRHLDRFRDD--------DRRMVSAVLYLNQPHDGGQLRM-------------LADGVEHDVEPVAGCLVVFLS--------GEVPHEVLPAGR-ERLSLTGWFRRRG..... 219
7 -25.7002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  17  25...............VPCMNKHGICVV-DDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDDIRGDKITWIEGKECETIGLLMSSMDDLI-KINGRTKAMVACYPGNGTGYVRHVDNPNGD---------GRCVTCIYYLNDAKVSGGILR------------PEGKAQFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDAD..... 220
8 -25.6006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  18  57.........................CIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSNRIRGDKIAWIGGDEDSLISRCNGRLGNYM---TGRTKCMVACYPGSGLGYIRHID---------NPNRDGRCVTVLYYLNNSQDCGGQLW------------PNNENKVVKIDPIFDRLLLFWS-------DRRNPHEVKPAYA-MRYAITLWYFDEKER... 243
9 -25.5004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  17  18...............VPCMNKHGICVV-DDFLGKETGQQIGDEVRALHDTGKFTDGSQKSDSSKDIRGDKITWIEGKECETIGLLMSSMDDLIYKINGRTKAMVACYPGNGTGYVRHVDNPNGD---------GRCVTCIYYLNDAKVSGGILR------------PEGKAQFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDAD..... 213
10 -25.5002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  17  20...............VPCMNKHGICVV-DDFLGKETGQQIGDEVRALHDTGKFTDGSQKSDSSKDIRGDKITWIEGKEGLLMSSMDDLIRHCNGKINGRTKAMVACYPGNGTGYVRHVD---------NPNGDGRCVTCIYYLNDAKVSGGILR------------PEGKAQFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDAD..... 215
11 -25.4005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  16  29.........................CVVDSFLGAALGGRVLAEVEALKRGGRLRDGSQRAIPPRSIRGDQIAWVEGHEGALMAHVDAVIRHCAGR-NGRTKAMVACYPGNGLGYVRHVD---------NPHGDGRCITCIYYLNDVKVHGGLLQ------------PEGRPVVANIEPLFDRLLIFWS-------DRRNPHEVKPAYA-TRYAITVWYFDAD..... 215
12 -25.1002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  17  14...............VPCMNKHGICVV-DDFLGKETGQQIGDEVRALHDTGKFTDGSQKSDSSKDIRGDKITWIEGKECETIGLLMSSMDDLIRHCNGRTKAMVACYPGNGTGYVRHVD---------NPNGDGRCVTCIYYLNDAKVSGGILR------------PEGKAQFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDAD..... 209
13 -25.0005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  18  25...............VPCMNKHGICVV-DDFLGKETGQQIGDEVRALHDTGKFTDGSQKSDSSKDIRGDKITWIEGKEGLLMSSMDDLVLHCNGKLGSRTKAMVACYPGNGTGYVRHVD---------NPNGDGRCVTCIYYLNDAKVSGGILR------------PEGKAQFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDAD..... 220
14 -25.0005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  18  34.........................CVVDDFLGKETGQQIGDEVRALHDTGKFTDGSQKSDSSKDIRGDKITWIEGKEPSSMDDLICHCNGKLGSYKINGRTKAACYPGNGTGYVRHVD---------NCNGDGRCVTCIYYLNDAKVSGGILR------------PEGKAQFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDAD..... 220
15 -21.9004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  14  65.............HEVIVMDMDPF-CVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELE-----------GRRIAFILYLVDRSMGGTLDLYSIDEHFQPKQIVK------SLIPSWNKLVFF-------EVSPVSFHQVSEVLSEERLSISGWFHGPS..... 255
16 -21.1003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  11  27...............IHALDADEADAIVMDIVPDGERDAWWDAHHAGIVATSVTLGQLQREQGDKLVSKAAEYFGIACRDALDAKPLTIGHDYEVEFLLATRRVYEPFEAPFNFAPHCDDVRDTVNWPLKRSFPRQLGGFLTIQGADNDAGMVMWDNRPESRAALDEMHAEYRIMLKPQPGQLTLF---------QSKNLHAIERC-TSTRRTMGLFL......... 262
17 -19.4004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  8  37..........QDGLKKEIEDSQPYWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGKLRQILYSKQYRDFFGYVTKAGKLSGSKTD-MSINTYTKGCHLLTHDDVIGSRRI--------SFILYLPDPDKSHYGGG-----LRLFPSILPNVPHSDPSAKLVPQFNQIAFF-------VLPGFSFHDVEEVKVDHRLSIQGWYHIPQ..... 246
18 -19.3003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  8  30FNPKIWDKTFQDGLKKEIEDSQPYWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGKLRQILYSKQYRDFFGYVTKAGKLSGSKTD-MSINTYTKGCHLLTHDDVIGSRRI--------SFILYLPDPDKSHYGGG-----LRLFPSILPNVPHSDPSAKLVPQFNQIAFF-------VLPGFSFHDVEEVKVDHRLSIQGWYHIPQ..... 249
19 -19.2005iqs_A mol:protein length:315 WelO5  ali model follow..  11  45...........TAIQDIIINRSFDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEHAIVGQSPDLKDYFASSAIDFEEQVESIFHSLSGLPVEIPTPATIRLLLEGREIAVHVGNDFLLMPAATLLDLSDQLSYFIPLTVPEAGGELVVYSLEWNPQEASKYA-QSQSVAYAPGPGDMLLFNG--------GRYYHRVSEVIGNPRRTIGGFL......... 295
20 -18.7003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  8  11FNPKIWDKTFQDGLKKEIEDSQPYWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGKLRQILYSKQYRDFFGYVTKAGKLSGSKTD-MSINTYTKGCHLLTHDDVIGSRR---------SFILYLPDPDKSHYGGG-----LRLFPSILPNVPHSDPSAKLVPQFNQIAFFK------VLPGFSFHDVEEVKVDHRLSIQGWYHIPQ..... 230
21 -16.9006fxk_A mol:protein length:718 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3  ali model follow..  17  543.........................VYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVEDQWLQLLRTYVGPMTYHTKARAVMNFVVRYRPDEQLRPHHD-----------SSTFTLNVALNHKGLDYEGGGCRFLRYDCV--------------ISSPRKGWALLH-------PGRLTHYHEGLPTTWGTRYIMVSFVDPAA..... 717
22 -16.8004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  12  96...........TAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFEDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYASLKPSNDGHRIRKPHKD------------NLDITPSSLFYFGNFQTEGYLELTDK---------------NCKVFVQPGDVLFFKG--------NEYKHVVANITSGWRIGLVYFAHKG...... 299
23 -13.8004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  9  21.....SDYEEQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVD--------PIHIFERPIVSVSF-------FSDSALCFGCKFQFKPIRVSEPVLSLPVRR--GSVTVL-----SGYAADEITHCIRPQDIKERRAVIILRKTRLDAPR. 243
24 -13.7005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  15  34.........................VVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKNDELLHGLCKRLFGPESGDYWLTTSSVLETEPGYHGQELHREHGIPICTTLGRQSPESMLNFLTALTDFENGATRVLPGSHLWEDFSAPPPKADTAIPAVMNPGDAVLF---------TGKTLHGAGKNNTTDF................ 220
25 -13.6004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  13  16......................DAAVVRPGFLSTAEEETLSRELEPELRR-RRYEYDHWDAAIHGFRETEKSRWSEASMAIMRRVQAAAFGPGQTLLSS---VHVLDLEARGYIKPHVD--------SIKFCGATIAGLSL-------LSPSVMRLVHTQEPGEW--------LELLLEPGSLYIL-----RGSARYDFSHEERRIPRGRRISVI............ 186
26 -13.5005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  14  40........................CVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKRFSKLVTTSPENDLMHELLQRVFSKPGEGMGYHFNDTMVIEVQPGAPAQRHRDQLYPWWNSMGPDAPECLVNFFCAVTPFENGATRLVPELTLINATDCPQYGKIDSVPAIMQPGDCYMM---------SGKVIHGAGHNATLSD................ 234
27 -13.3004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  12  7..........DRAAAIERFRRDGFANA-GPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLE-EELAQLAAAFVDGPVVPTAYALVLK-YRAAEVPWHRDRVN---------GPRTVCNLSICLDDAHNGCLEAVPGSHLLPDDAEVAKVRATGVPVPVSQGDVVVH---------DVRLVHGSGPNANGSW................ 206
28 -13.2004xbz_A mol:protein length:334 EvdO1  ali model follow..  13  37.........GLLPEHVTAFRRQGVLVV-RGLLTPQELADVQEAGRALIDRATVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGLLLRIMEQLVGPNLITWDSMVFKTPAGAPRLAWHRDA----DNAVGVTGAGRVIDAGIYLDPAPEDNCVWCRLTATADQLNASEWDTTGAVPAVMQPGDLLLH---------NILTLHGAPAVVGKQR................ 248
29 -13.0005ybm_A mol:protein length:314 PrhA  ali model follow..  16  40........................CVVIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKRFSKCVIASPESDLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPAQRHRDQLYPWWNSMGPAGPECVINFFCAVTPFENGATRLVPEFTQINERDCPQFGKIETVPAIMQPGDCYLM---------SGKVIHGAGHNATTTD................ 234
30 -12.8004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  13  20.........................IKQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKSKGEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVD--------PIHIFERPIVSVSF-------FSDSALCFGCKFLFKPIRVSEPVLHLPVRR--GSVTVL-----SGYAADDITHCIRP-IKERRAVII............ 212
31 -12.7002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  9  1..........MSLAQIKSLFATRYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVA--ELDGKALRLEDLPEGGVHGSHIH-------------PHSVISGTTYVAMPEGTSALKLEDMAAPTRRKGAREELRTFRSVAPKVGDVLLWES----------LRHEVPMNMAEEDRISVSF.......... 203
32 -12.5004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  12  38........................VAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLADFIPDHVNHELLHKICRLTFE-------WLGYGAVIENGPGTTEQKHRDQPRYPLVKEGPDAPEGMLNFFTALTDFAETGKTQYILGSNKRVELGEPDADHPIEYVGLKPGDTTIV---------SGKITHRGSD...................... 227
33 -12.4002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  16  15.....TPLLGDRAALDSFYEEHGYLFL-RNVLDRDLVKTVAEQMREGLVALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFLSSFHYLTPFHQDGF---------GPNQDFRTFWIPLIRTESGGVALADGSHRRGKRDHVLNESFRRLHSPMEPGDILLFHAH---------MCHKSIPNLSKDP................ 239
34 -12.3005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  12  34.........................AIIESFLSLDIVRRLNEEVDPFVKPIPAAKTKDHPNHVLSTTTRLVNVLAPISKAYREDVLNSLHRICSDAFHVYGDYWVLMGAVNPAQPLHRDFSHPIVEYLKPDAPATSINFLVALSPFENGATHVILGSHKWQNLSNVSM--DATVRALMNPGDALLI---------TDSTIHCGGAETTGTE-MGISQLTPL...... 239
35 -12.2003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  8  15...........................LSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVA--DLDGRALELEDLPEGGSHASHIH-------------PHSVISGTTYVSMPGGTSALKLEDMAAPARRKTARDELRQFIYVTPAVGDVLLWES----------LRHEVPMNMSEDDRISVSF.......... 199
36 -12.1003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  12  8..........FADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDSQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAP--------------IVSVSLGLPAIFQFGGLKRNDPL--------KRLLLEHGDVVVW------GGESRLFYHGFHPLTIDCRYNLT............ 211
37 -12.1004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  12  34.........PISARQAAAFDRDGYIVL-EDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQSNEIRSIFEIHAQSPVMARRLADVARFLLGDEVYHQSRLNYKPGFKGREFYWHSDFETWHVEDGMPR--MRALSMSVLLAENHNGPLMVIPGSHRTYLTCVGETPDDHYVAPTGKPGTVILF---------DCNLMHGSNG...................... 251
38 -11.9004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  10  14......................KSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVD--------PIHIFERPIVSVSF-------FSDSALCFGCKFQFKPIRVSEPVLSLPVRR--GSVTVL-----SGYAADEITHCIRP-IKERRAVII............ 209
39 -11.8005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  11  40.........................VIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGD--NLPFAHEVLEKVFKKDSGDYWLNMGNILNMLPGAEAQRPHRDLYPVSQHMDPATSPDLMINITFPLNEFHDNGGTLLLPKSHTGPNADFYANAEDLPAAEMQVGDALIF---------TGKCVHGGGANRSDKP-AQPGYLTPR...... 246
40 -11.7004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  13  33........................AFILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADKYPPHFKYVPNVATTCPNPVIHAICEAY--FQRTGDYWLSAAFLREIESGMPAQPHRDDTHPLMHYQPLEAPPVSLSVIFPLTEFENGATEVILGSHRWTEVGTPER--DQAVLATMDPGDVLIV---------RQRVVHAGGG...................... 212
41 -11.7002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  12  5....................LAAGAVILRRFAFNAAEQLIRDMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAP--------------IVSVSLGLPAIFQFGGLKRNDPLKRLLLEHG-DVVVWGGESRLFYH--------QPLKAGFHPLTIDCRYNLT............ 198
42 -11.6004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  10  7..........LTREQLYIFDTTGFLVI-PGVFGSGEVESFRSELERLDTVD---PGFPRTRRYPDLPAASPVFARLALDDRLLAPVRRLLEGYGLRRTKDSVLYLHGGNSELLDLGDRQVGRDLSITHTYHDGKPYVKALVYLSDIEDGSFCYVQGSHKANFPLLRERAERGESDVFVRSGDVLLL---------NEALMHGTRR...................... 213
43 -11.5004xab_A mol:protein length:252 EvdO2  ali model follow..  11  3...AMEVVGTIDHRDREEFRSRGFAIL-PQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQPHFARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHQDE-----AYMDPRWRRRGLSIWTTLDEAESGCLHYLPGGHRGPVLPHHHIDNDDRVACPLAPGGAVVHDFR---------TPHYAGP...................... 219
44 -11.5005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  14  24.........AALERLAARYRRDGYVHV-PGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTVMDYVADAQLGSDTMRRLATHRIAALAEYLAGSPLRLFKLEVLLK-DASVPTAPHHDA-----FAFPFSTAGTALTAWVALVDVERGCMTFVPGSHLLPDPDTGDEPWAGAVTVPLRAGDCTFHHAR---------TVHSAGANSTDEP................ 228
45 -11.3003emr_A mol:protein length:310 EctD  ali model follow..  10  34.........PITKEQLDSYEKNGFLQI-KNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPESNDIRSIFHVHQDDNYFQDRILDIVRHLLGSDVYHQSRINYKPGFKGKEFDWHSDFETWHVEDGMPR--MRAISVSIALSDNFNGPLMLIPGSHNEESLRELTRIGGGISVPTGKAGSVTLF---------ESNTMHGSTSNITPYP................ 258
46 -11.3004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  13  6......................AGAVILRRFAFNAAEQLIRDINDAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDKIHPDLRAP--------------IVSVSLGLPAIFQFGGLKRNDPLKRLLLEHG-DVVVWGGESRLFYH--------QPLKAGFHPLTIDCRYNLT............ 197
47 -11.2002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  14  22.........VLTLEQRKFYEENGFLVI-KNLVPDADIQRFRNEFEKICRKTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMH-DSGKKTSRHPLH--QDLHYFPFRPSDLIVCAWTAMEHINNGCLVVLPGTHKGSLKPHDYPKWEGGVHLVMEKGDTVFF---------HPLLIHGSGQ...................... 238
48 -11.2005epa_A mol:protein length:279 SnoK  ali model follow..  13  17.........NLSKEAVRFYREQGYVHI-PRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQAWQKHPELRSLVPEISGIALRLAGAPLRYSSDILVKEPKRTLPTLVHDDE-----TGLPLNELSATLTAWIALTDVERGCMSYVPGSHLRAREDRQEHMTSFAVAVPVRAGDVVFHHCR---------TVHMAEA...................... 219
49 -11.2003nnf_A mol:protein length:344 CurA  ali model follow..  10  22.........EQVEQLKQEYEEKGYCQI-KKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKSFIQEKLALLNYITGKNLMIMHNALFSVEPNHKGLPWHVGVG------SFTKTEDFGASIWIPLDKIEHRGGMQY-IYNKITEDVIDYTIKDGYEEDEYNLGDAFFF---------NKYVLHQSVPLKPGLH................ 256
50 -11.1003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  12  111......................PGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLR-KGYIKHKPDQMTINQYEPGQGIPAHID--------THSAFEDEIVSLSL-------GSEIVM----------DFKHPDGIAVPVMLPRRSLLVM-----TGESRYLWTHG......................... 269
51 -10.9005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  15  4........MQLTADQVEKYKSDGYVLL-EGAFSPEEVHVMRQALKKDQEVQ-----GPHRILEEDGRTVRALYASHTRQSVFDQLSRSDRLLGPATQLLECDLYIHQFKIGDSWAWHQDFIVWRDTDGLP--APRAVNVGVFLSDVFNGPVVFLSGSHQRGTVERKARETSRSVSPKAASGSVMLF---------HPEIIHGSAPNISPFA................ 223
52 -10.6005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  13  5................PLQYLRPGMVLLKKFLKHDDQVDIIRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQD---KDETKPSLHKGLPVVSFSL-------GDTAEFLYGDVNDVDKA--------SKVDLESGDVLIF------GGKSRLIFHGVSRIKPKT................. 208
53 -10.4002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  11  33.....................VSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTRITMEPNPHWHPVLRTLKNRIEENTGHTFNS---LLCNLYRNEKDS--HSD------DEPSLGRCPIIASLSF-------GATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM-----EGATQADWQHR......................... 204
54 -9.7502fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  10  3...HMSKKFALTAEQRASFEKNGFIGP-FDAYSPEEMKETWKRTRLRLLDRS--AAAYQDLDAISGGTNIANYDRHLDDDFLPEICDRVESILGPNVLCWRTEFFPKYPGDEGTDWHQADTKPQIIWPENEEFGGTITVWTAFTDAANGCLQFIPGTQNSMNYDETKRMTYEPVPMQMKAGQFIIF---------WSTLMHASYP...................... 242
55 -9.5503gja_A mol:protein length:319 CytC3  ali model follow..  11  11.........TFSPEEVARFERDGYIGP-VKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGKANISNYDRHLDIDLLAEHIMREIVDRVGSLIGRNLLCWRSEFFPKYQGDEGTDWHQAFAHATGKPQIIWPSDGTITVWTAFTHSQNGCLQLMPGTHTSMNYDESKGMDYDAYPMVLKPGEAVIF---------WSNTMHASLPHTGSKT................ 250
56 -9.3306EC3 Entity 1(prereleased)  ali follow..  11  247.........ARLGAQIRRFREDGFVNA-GPVFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYREKQDWAERELLFRPELAELAAAFVGSPVVPTA-KRAAGVPWHRDRA----------APHTVCNLSICLDTAENGCLEGVPGSHLLPDDIDVPEIRDGGVPVPSKVGDVIVH---------DVRLVHGSGP...................... 439
57 -9.2702opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  13  1.......MACLSPSQLQKFQQDGFLVL-EGFLSAEECVAMQQRIGEIVAEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKKVQTLARSLGLQMPVVVQSMYIFK-HFGGEVSPHQD-----ASFLYTEPLGRVLGVWIAVEDAENGCLWFIPGSHTSGVSRRMVRAPVGSVPTPVQRGALVLIHGE---------VVHKSKQ...................... 250
58 -9.2204mgt_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  13  1.............MSWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEAKQATYGDAG----LTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNF---VLINRYKDGSDHICHRD------DERELAPGSPIASVSF-------GASRDF-VFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM-----NHPTNTHWYHS......................... 183
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.