| | | | | | . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 |
# |
Score |
Template |
Links and tools | %id | First |
MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL | Last |
1 | -87.900 | 2oug_A mol:protein length:162 Transcriptional activator rfaH |
ali model |
100 | 1 | MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL |
162 |
2 | -72.000 | 2lq8_A mol:protein length:177 Transcription antitermination protein nusG |
ali model follow.. |
21 | 4 | KKKWYIVLTMSGYEEKVKENIEKKVEATGIKVGRIVIPIRGGQRRKSEKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSGGQPVPVKDREMRPILRLAGLEEYEEKKFKVGDMVKIISGPFEDFAGVIKEIDERQELKVNVTIFGRETPVVLHVSEVEKI |
176 |
3 | -69.100 | 5ms0_F mol:protein length:183 Transcription termination/antitermination protein NusG |
ali model follow.. |
16 | 9 | .KRWYVVQAFSGFEGRVATSLRDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGTSDRPAPISDKEVDAIMNRLQQVPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDEKSRLKVSVSIFGRATPVELDFSQVEKA |
183 |
4 | -65.600 | 1m1g_A mol:protein length:248 Transcription antitermination protein nusG |
ali model follow.. |
14 | 80 | .KKGVTTFRIENGEVKVVESVEGDTCVNAPPIITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHEKRKLTVMISIFGRMTPVELDFDQVEKI |
248 |
5 | -52.200 | 2xhc_A mol:protein length:352 TRANSCRIPTION ANTITERMINATION PROTEIN NUSG |
ali model follow.. |
19 | 169 | .QDVYYIPLDVFDRDRIKKGKEVKQGEMLAEARKSTRKEIRIYKTKRRKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSGGQPVPVKDREMRPILRLAGLEVKVELGFKVGDMVKIISGPFEDFAGVIKEIDERQELKVNVTIFGRETPVVLHVSEVEKI |
352 |
6 | -49.100 | 1nz8_A mol:protein length:119 TRANSCRIPTION ANTITERMINATION PROTEIN NUSG |
ali model follow.. |
24 | 2 | .IEWYAVHTLVGQEEKAKANLEKKIFQVLIPTEEVVEREGGKKEVVRKKLFPGYLFIQMDLGDEAWEVVRGTPGITGFVGAGMRPVPLSPDEVRHILEVSGLL........................................................... |
118 |
7 | -33.500 | 4zn1_A mol:protein length:147 Transcription elongation factor Spt5 |
ali model follow.. |
17 | 2 | ...IFAVRTMVGQEKNIAGLMASRAEKEQLDVYSI----------LASESLKGYVLVEAETKGDVEELIKGMPRVRGIV-----PGTIAIEEIEPLLTPKKI----IENIEKGDVVEIIAGPFKGERAKVIRVDHKEEVTLELENAAVPIPITLPVEGVKIV |
142 |
8 | -31.300 | 3qqc_D mol:protein length:163 Transcription antitermination protein nusG |
ali model follow.. |
18 | 3 | .GKIFAVRVTHGQEETTAKLIYSKVRTYNLPIYAI----------LAPSRVKGYIFVEAPNKGVVDEAIRGIRHARGVL-----PGEVPFKEIEHFLEEKPA----VSGLEPGDLVEVIAGPFKGQKAKVVKIDSKDEVVVQFIDAIVPIPVTIKGDYVRLI |
145 |
9 | -30.100 | 2lcl_A mol:protein length:66 Transcriptional activator rfaH |
ali model follow.. |
100 | 5 | ....................................................................................................PKDIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL |
66 |
10 | -25.200 | 2kvq_G mol:protein length:63 Transcription antitermination protein nusG |
ali model follow.. |
16 | 2 | .....................................................................................................AMGRPKTLFEPGEMVRVNDGPFADFNGVVEEVDEKSRLKVSVSIFGRATPVELDFSQVEKA |
63 |
11 | -24.900 | 2mi6_A mol:protein length:62 Transcription termination/antitermination protein NusG |
ali model follow.. |
16 | 1 | .....................................................................................................GRPVVEVDYEVGESVTVMDGPFATLPATISEVNEQQKLKVLVSIFGRETPVELTFGQVSKI |
62 |
12 | -24.400 | 6duq_M mol:protein length:60 Transcription termination/antitermination protein NusG |
ali model follow.. |
17 | 3 | .........................................................................................................AKTLFEPGEMVRVNDGPFADFNGVVEEVDEKSRLKVSVSIFGRATPVELDFSQVEKA |
60 |
13 | -23.300 | 1nz9_A mol:protein length:58 TRANSCRIPTION ANTITERMINATION PROTEIN NUSG |
ali model follow.. |
17 | 1 | .........................................................................................................AQVAFREGDQVRVVSGPFADFTGTVTEINERGKVKVMVTIFGRETPVELDFSQVVK. |
57 |
14 | -16.400 | 2e6z_A mol:protein length:59 Transcription elongation factor SPT5 |
ali model follow.. |
20 | 1 | ......................................................................................................GSSGSSGFQPGDNVEVCEGELINLQGKILSVDGN-KITIMPKHEDLKDMLEFPAQELRK. |
58 |
15 | -14.400 | 5xon_W mol:protein length:612 Protein that forms a complex with Spt4p |
ali model follow.. |
13 | 24 | ....WGVKVRLGKEKDVVRQILKKKLA-----REGTKNPLEIYSAFQRDSFKGHVYIEARKAEAINDALKGNVNVFS----NNSKFLVGIVEYKDLLRPVKSS---DVKLTRGSYVRVKNGKFKGDLAQVDEVLENGL-EARLKLVPR.............. |
154 |
16 | -14.000 | 5oik_Z mol:protein length:1087 Transcription elongation factor SPT5 |
ali model follow.. |
16 | 180 | ...W-TVKCKIGEERATAISLMRKFIA-----YQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE---GVGNLRLGYWNQQMVPIKEMTDVLKVVKE----VANLKPKSWVRLKRGIYKDDIAQVDYVEPSQN-TISLKMIPR.............. |
310 |
17 | -13.600 | 5xog_W mol:protein length:83 Spt4/5 complex component |
ali model follow.. |
19 | 21 | ................................................................................................................NKTVKIRQGGYKGKIGIVKEANGDR---FRVELHNPNKTIPIPCSFLLIE |
67 |
18 | -13.400 | 2e70_A mol:protein length:71 Transcription elongation factor SPT5 |
ali model follow.. |
17 | 21 | ................................................................................................................GQTVRISQGPYKGYIGVVKDATEST---ARVELHSTCQTISVDRQRLTTV |
67 |
19 | -11.900 | 4ytl_A mol:protein length:99 Transcription elongation factor SPT5 |
ali model follow.. |
20 | 1 | .............................................................................................................FQPGDRIEVLNGEQRGSKGIVTRTTKD---IATIKLNGFTTPLEFPISTLRKI |
50 |
20 | -10.900 | 5ohq_A mol:protein length:111 Transcription elongation factor SPT5 |
ali model follow.. |
18 | 8 | ......................................................IQVKV-RDTYLDTQVVGQTGVIRSVTGGMCSVYLKDS---EKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGED---GIVRMDLDEQLKILNLRFLGKL |
108 |
21 | -10.300 | 2do3_A mol:protein length:69 Transcription elongation factor SPT5 |
ali model follow.. |
26 | 18 | .............................................................................................................FKMGDHVKVIAGRFEGDTGLIVRVEEN-FVILFSDLTMHELKV.......... |
59 |
22 | -10.000 | 2ckk_A mol:protein length:127 KIN17 |
ali model follow.. |
8 | 19 | ......................................................IIVKIITKKLGEKYHKKKAIVKEVIDKYTAVVKMIDS---GDKLKLDQTHLETVIPAPGKRILVLNGGYRGNEGTLESINEKTTIVIETGPLKGRRVEGIQYEDISKL |
126 |
23 | -9.760 | 2exu_A mol:protein length:200 Transcription initiation protein SPT4/SPT5 |
ali model follow.. |
10 | 105 | ....WGVRCRPGKEKELIRKLLKKKFNL---DRAMGKKKLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDI-----YISQKLLIPVQELPLLLKPNLE............................................................ |
194 |
24 | -9.740 | 3h7h_B mol:protein length:106 Transcription elongation factor SPT5 |
ali model follow.. |
15 | 9 | ....WTVKCKIGEERATAISLMRKFIA-----YQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE---GVGNLRLGYWNQQMVPIKEMTDVLKVVKE............................................................ |
98 |
25 | -9.330 | 3lpe_A mol:protein length:92 Putative transcription antitermination protein nusG |
ali model follow.. |
15 | 13 | ....FAVRTMVGQEKNIAGLMASRAEKEQLDVYSI----------LASESLKGYVLVEAETKGDVEELIKGMPRV-----RGIVPGTIAIEEIEPLLT................................................................ |
91 |
26 | -9.160 | 3ewg_A mol:protein length:91 Putative transcription antitermination protein nusG |
ali model follow.. |
15 | 3 | ....FAVRTMVGQEKNIAGLMASRAEKEQLDVYSI----------LASESLKGYVLVEAETKGDVEELIKGMPRV-----RGIVPGTIAIEEIEPLLTPKLE............................................................ |
85 |