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Query: 2qfc_A mol:protein length:293 PlcR protein, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MQAEKLGSEIKKIRVLRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNKISRLELast
1 -96.4002qfc_A mol:protein length:293 PlcR protein  ali model  100  1MQAEKLGSEIKKIRVLRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNKISRLE 287
2 -62.9005jub_A mol:protein length:310 Transcriptional regulator  ali model follow..  15  1MNLKSIGLRIKTERERQQMSREVLCLDGATVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYEMKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKTNDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIEKSQLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIVFASVLEDSVLEESIKAGKLAD. 297
3 -55.5005fd4_A mol:protein length:324 ComR  ali model follow..  12  20MNDKEFGQRVRQLRESASMTREQFCDDELSVRQLTRIEAGASKPTFSKIQYIATRLGMGLYELMPDYVSLPERYSKLKFDVLRTYGNEDLAEKRDAMMTEIYDDYDELPEEEKIAIDAIQSRIDTLESGTAGFGKEILEDYFEQIFRKNDLLIVRLHLEYVRLSSCDSEIFRQFLKIIEHLHEQINIINSNDFVLRDTLLSCVNILGSKKYYEPIPKIFDSVDKIIQSTQDFQKKPIVSVLKWKYALFVDKDRDEAEKHYLDAVLFAKLIENRELEQKIEEDWRV.. 315
4 -50.1004ryk_A mol:protein length:306 Lmo0325 protein  ali model follow..  14  1..MGSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITLSLFEEILKRIMVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQALLDKITLERTEQSEVRKAILHTRIQTINHYLRTNVFDESNISDEYKKIIHDYLWKLEEVRIFSNGISFF----EEEVQIHFYQIMLKSYEKYDRGRLLFCHLFANLTDELIIQNKINYALEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGEVEKGYRQ-AKRAIQTWKELHYEAIADLYSVVLKQF. 290
5 -46.3004yv6_A mol:protein length:284 Transcriptional regulator  ali model follow..  14  1.MDKELGKTLRRLRQGKQVSISSLADEHLSKSQISRFERGESEISCSRLLNLLDKLNITIDEFVSTHSKTHTHF-FTLLSRVRKYYAEKNVAKLLKLLEDYAHKDYESTMIKAILSSIEP------TVEPSEEEVTRLTDYLFSVEQ---GYYEIILLGNCSRFINYNTLFLLTKEMVTSF-AYSEQNKTNKTLVTQLSINCLIISIDYSYFDHSHYLIEKIEFLLRDELNFYEKTVFLYVHGYYKLKQG--QVSGKDDMRQALQIFKYLGEDALYYSYKEHYRKE. 273
6 -41.1002aw6_A mol:protein length:317 PrgX  ali model follow..  11  1..MFKIGSVLKQIRQELNYHQIDLYSGIMSKSVYIKVEADSRPISVEELSKFSERLGVNFFEILNRAGMNTKSVNETGKEKLLISKIFTNPDLFDKNFQRIEPKRL-TSLQYFSIYLGYISIAHHYNIEVPTFNKTITSDLKHLYDKRTTFGIDYEIVSNLLNVL----PYEEVSSIIKPMYPIVDSFGKDDLTIQTVLKNALTISIMNRNLKEAQYYINQFEHLKTIKNNGYYDLEINYLKQIYQFLTDKNIDSYLN-AVNIINIFKIIGKEDIHRSLVEELTKIS 284
7 -32.8005v5t_A mol:protein length:306 Conserved domain protein  ali model follow..  14  5MEYRPLGEEIERIRKGKNIPLRVFDENGVSSRSYQRFVQGNSELRISDLAIIVEILSISPMEMTEKL--TPMSKTVLAKEQFNQAIFSKNFQESSRIVADYRAYYEKSSFALGKQEVMYSMLALEYLFNTKEEIIALENQILERLINADVTIFNLKFLALQKNVGLQPFPTSLLFRVLQSVNEREIIDIRSLEIIEQVIIDFLFAAIVSQNVPHILHVLSMFKEYEVGENNWRMILWKKIAEKIEMILTNEEIFADWSIFKEQILLSITLFLAGQLEKIEDSLKEIK 303
8 -32.3003gw4_A mol:protein length:203 Uncharacterized protein  ali model follow..  10  2..........................................................................................AFEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQ-HWLRARDIFAELEDSEAVNELMTRLNGLE 197
9 -30.1002p5t_A mol:protein length:158 Putative transcriptional regulator PezA  ali model follow..  21  2.....IGKNIKSLRKTHDLTQLEFARIVISRNSLSRYENGTSSVSTELIDIICQKFNVSYVDIVGEDKMLN........................................................................................................................................................................................................................ 68
10 -29.9003ulq_A mol:protein length:383 Response regulator aspartate phosphatase F  ali model follow..  11  7ISSSSIGEKINEWYMYIRRFSIPDAEYLRREQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEIDKELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEANIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK-QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHE-YHSKGMAYSQKAGDVIYLSEFE....... 307
11 -29.8003ivp_A mol:protein length:126 Putative transposon-related DNA-binding protein  ali model follow..  18  8YDFRALGLAIKEARKKQGLTREQVGAMIIDPRYLTNIENKGQHPSLQVLYDLVSLLNVSVDEFFLPASSQVKSTKRRQLENKIDNFTDADLVIMESVADGIVKSKEVGEMAGENLYF.......................................................................................................................................................................... 125
12 -28.9005woq_A mol:protein length:120 Transcriptional regulator ClgR  ali model follow..  21  6LLREVIGDVLRNARTDQGRTLREVSDAAVSLGYLSEVERGRKEASSELLSAICDALDVPLSRVLTDAGES......................................................................................................................................................................................................................... 76
13 -28.7003kxa_A mol:protein length:141 Putative uncharacterized protein  ali model follow..  20  60..LKAGGETFVSLRMKKGFTQSELATGL-PQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRAAFERRY........................................................................................................................................................................................................................ 129
14 -28.7003f51_A mol:protein length:117 Clp gene regulator (ClgR)  ali model follow..  22  27...EALGAALRSFRADKGVTLRELAEASVSPGYLSELERGRKEVSSELLASVCHALGASVADVLIEAAGSM........................................................................................................................................................................................................................ 95
15 -28.6003q15_A mol:protein length:378 Response regulator aspartate phosphatase H  ali model follow..  10  3..............MSQAIPSSRVGVKI--NEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVE-HFQKAAKVSREKVPDLLPKVL........ 264
16 -28.4004i1a_A mol:protein length:391 Response regulator aspartate phosphatase I  ali model follow..  13  1.........MRGVFLDKDIPYDLVTKKL--NEWYTSIKNDQVEQAEIIKTEVEKEL----LNMEENQDALLYYQLLEFRHEIMLSYMKSKEIEDLNNAYETIKEIEKQGQLTLEYYFYFFKGMYEFRRKELISAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTYFSMNYANRALKIFREYEEYAVQTVRCQFIVAGNLIDSLEYERALEQFLKSLEISKESNIEHLIAMSHMNIGICYDELKEYKKASQ-HLILALEIFEKSKHSFLTKTL........ 266
17 -27.8004gyo_A mol:protein length:373 Response regulator aspartate phosphatase J  ali model follow..  14  1..............MRAKIPSEEVAVKL--NEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFSDMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMNYASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAEG-YFKTAAAIFEEHNFQQAVQAV........ 262
18 -27.1003mlf_A mol:protein length:111 transcriptional regulator  ali model follow..  16  13YFQSNAMKTLKELRTDYGLTQKELGDLFVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDIFLGNEYENFVFTNDKKKSIILAFKEKQ..................................................................................................................................................................................................... 103
19 -27.1004gpk_A mol:protein length:372 NprR  ali model follow..  12  1.......................................................MAVT-------DLRDVEEDVKGKLDEWLNALVHLDKQQVERIYEELQGEMKHVLDFEIINYYKLLYTRYLIMKRDISALEEELDK-LKKVYKKYSPFQKLLYMYGRGLLCCLQYRWKDGLDYLLKTEVMAKEQGYHE---TGLYYNIALAYTHLDIHHLAIHFVNMALEGFRSEYKFRNIINCQILIAVSYTEKGQYEEALKMYESILREATSFADKDVLLAITLSNMGSI. 220
20 -26.5001y9q_A mol:protein length:192 transcriptional regulator, HTH_3 family  ali model follow..  23  7MFKSQIANQLKNLRKSRGLSLDATAQGV-SKAMLGQIERGESSPTIATLWKIASGLEASFSAFFA.............................................................................................................................................................................................................................. 72
21 -26.4005uk3_A mol:protein length:176 Uncharacterized protein  ali model follow..  14  15YARQIMSNQFIKAKESKGLTYQQMAQLLVNKVWLTSVLHGQNCCDIQLAHRICDTLGISHEYANELTSIPL........................................................................................................................................................................................................................ 86
22 -26.1003op9_A mol:protein length:114 Pli0006 protein  ali model follow..  14  5TIQHQFAENLSRLKKEHGLKNHQIAELLVQTRTVAYYMSGETKPDIEKLIRLATYFHLSIDELVGYVQEDKVWNDLSLKQWLLSLRSEEEIAKIKILVDTVET........................................................................................................................................................................................ 110
23 -25.9005k98_B mol:protein length:91 Antitoxin HipB  ali model follow..  17  14...TQLANAMKLVRQQNGWTQSELAKKIIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDTKNASPESTEQQDL................................................................................................................................................................................................................. 89
24 -25.8004jhr_A mol:protein length:333 G-protein-signaling modulator 2  ali model follow..  9  16....NLGKVLGNFDEAIVCCQRHLD--------ISR-ELNDKVGEARALYNLGN---------VYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK-DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH-FAEKHLEISREVGDLEVLFQGPPDEDFF. 280
25 -25.7002wiu_B mol:protein length:88 HTH-TYPE TRANSCRIPTIONAL REGULATOR HIPB  ali model follow..  17  11...TQLANAMKLVRQQNGWTQSELAKKIIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNL................................................................................................................................................................................................................. 86
26 -25.7004pu3_D mol:protein length:118 Toxin-antitoxin system antidote transcriptional repressor Xre family  ali model follow..  21  39LNQQSLGLLIKERRKSAALTQDVAAMGV-TKKTLIRVEKGED-VYISTVFKILDGLGIDIVSAQTSDTETN........................................................................................................................................................................................................................ 109
27 -25.6003vk0_A mol:protein length:114 Transcriptional regulator  ali model follow..  17  20...AVLAYNMRLFRVNKGWSQEELARGL-DRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQER......................................................................................................................................................................................................................... 87
28 -25.5001b0n_A mol:protein length:111 PROTEIN (SINR PROTEIN)  ali model follow..  20  2.....IGQRIKQYRKEKGYSLSELAEKAVAKSYLSSIERNQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGEKLVRDAMTSGVSKKQFREFLDYQKWRKSQKE..................................................................................................................................................................................... 110
29 -25.3001dw9_A mol:protein length:156 CYANATE LYASE  ali model follow..  13  9NIRLDLADAILLSKAKKDLSFAEIADGTLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQM........................................................................................................................................................................................................................... 77
30 -25.3004y42_A mol:protein length:156 Cyanate hydratase  ali model follow..  14  9SPRETLTDTIMMAKIRKNLTFEAINQGTLSLAFVTAALLGQHPLPEQAARVVAEKLDLDEDAIRLLQTIPL........................................................................................................................................................................................................................ 80
31 -25.2003fya_A mol:protein length:99 Regulatory protein  ali model follow..  27  20..LSKVSFVIKKIRLEKGMTQEDLAYKSLDATYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKH..................................................................................................................................................................................................................... 92
32 -25.0003g5g_A mol:protein length:99 Regulatory protein  ali model follow..  27  20..LSKVSFVIKKIRLEKGMTQEDLAY--LDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKH..................................................................................................................................................................................................................... 92
33 -24.9001adr_A mol:protein length:76 P22 C2 REPRESSOR  ali model follow..  18  1MNTQLMGERIRARRKKLKIRQAALGKMVVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLK.............................................................................................................................................................................................................................. 66
34 -24.8005a7d_B mol:protein length:382 PINS  ali model follow..  9  62....QLGKAMQYHKHDLTLAK-SMNDRLGEAKSSGNLRFDEAAICCERHLTLARQLGDRLSE-LGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELG-EREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALK-YAEQHLQLAKELHDPVGESTARVNISDL. 363
35 -24.8005a6c_A mol:protein length:374 G-PROTEIN-SIGNALING MODULATOR 2, AFADIN  ali model follow..  9  46....QLGKALEYHHHDLTLAR-TIGDQLGEAKASGNLNFDEAIVCCQRHLDISRELN-NLGNVYHAK--KSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK-DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMH-FAEKHLEISREVGDQRNASYLKTQVLSP. 350
36 -24.8001x57_A mol:protein length:91 Endothelial differentiation-related factor 1  ali model follow..  25  12...LEVGKVIQQGRQSKGLTQKDLATKIEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGKDI.............................................................................................................................................................................................................................. 74
37 -24.3004g2v_A mol:protein length:340 G-protein-signaling modulator 2  ali model follow..  8  50....QLGKALEYHHHDLTLAR-TIGDQLGEAKASGNLNFDEAIVCCQRHLDISRELN-NLGNVYHAKG-KSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK-DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH-FAEKHLEISREVGD............... 340
38 -24.3004wng_A mol:protein length:407 G-protein-signaling modulator 2  ali model follow..  9  53....QLGKALEYHHHDLTLAR-TIGDQLGEAKASGNLNFDEAIVCCQRHLDISRELN-NLGNVYHAKG-KSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK-DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMH-FAEKHLEISREVGDKSGELTARLNLSDL. 357
39 -23.9002l49_A mol:protein length:99 C protein  ali model follow..  20  1.MSNTISEKIVLMRKSEYLSRQQLADLTVPYGTLSYYESGRSTPPTDVMMNILQTPQFTKYTLW............................................................................................................................................................................................................................... 64
40 -23.9002ifu_A mol:protein length:307 gamma-snap  ali model follow..  6  2....................................IAAQKISEAHEHIAKAEKYLKTSF-------KPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLM-EPLDLSKAVHLYQQAAAVFENEE-RLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAA-QKCVRESYSIPGFSGSED............. 232
41 -23.8002mez_A mol:protein length:106 Multiprotein Bridging Factor (MBP-like)  ali model follow..  25  7.IVTDYYKIIKTAREQLGISQQQLAQKLVSENIVKRFESGKLKPTISQARQLEKILGIKLVTPLENNEESEKE...................................................................................................................................................................................................................... 79
42 -23.8004z5h_A mol:protein length:72 Antitoxin HipB  ali model follow..  20  9...TQLANAMKLVRQQNGWTQAELAKKIIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDA.............................................................................................................................................................................................................................. 71
43 -23.7004o8b_A mol:protein length:122 Uncharacterized protein  ali model follow..  28  2.....LGTRLKAARIRAGYSQKQLGMLVSASARMNQYERERHSPNMRTSEQLAMVLQVPMAYLY............................................................................................................................................................................................................................... 65
44 -23.6004i6t_A mol:protein length:82 Regulatory protein  ali model follow..  27  9..LSKVSFVIKKIRLEKGMTQEDLAYKSLDRAYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKH..................................................................................................................................................................................................................... 81
45 -23.6005cwj_A mol:protein length:171 Designed helical repeat protein  ali model follow..  10  2.................................................................................................................................DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESG-SEEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQDPRVLEE-AIRVIRQIAEESGSEEARRQAERAEEEIR 157
46 -23.6004ia8_A mol:protein length:82 Regulatory protein  ali model follow..  27  9..LSKVSFVIKKIRLEKGMTQEDLAYKSLDRTAISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKH..................................................................................................................................................................................................................... 81
47 -23.5004f8d_A mol:protein length:82 Regulatory protein  ali model follow..  27  9..LSKVSFVIKKIRLEKGMTQEDLAYKSLDRTYISGIERNSANLTIKSLELIMKGLEVSDVVFFEMLIKEILKH..................................................................................................................................................................................................................... 81
48 -23.5003omt_A mol:protein length:73 uncharacterized protein  ali model follow..  23  4MTERKIFNRLKSVLAEKGKTNLWLTETLKNKTTVSKWCTNDVQPSLETLFDIAEALNVDVRELIVSTKR.......................................................................................................................................................................................................................... 73
49 -23.5001zz6_A mol:protein length:198 Hydroxypropylphosphonic Acid Epoxidase  ali model follow..  15  7.ASTGFAELLKDRREQVKMDHAALASLLETPETVAAWENGEGGETLTQLGRIAHVLGTSIGALTPPAGNDLDD...................................................................................................................................................................................................................... 80
50 -23.4003ro3_A mol:protein length:164 G-protein-signaling modulator 2  ali model follow..  11  15........................................................................................................................LGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK-DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH-FAEKHLEISREVGD............... 164
51 -23.4004i6u_A mol:protein length:82 Regulatory protein  ali model follow..  27  9..LSKVSFVIKKIRLEKGMTQEDLAY--LDRTFISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKH..................................................................................................................................................................................................................... 81
52 -23.4004fn3_A mol:protein length:82 Regulatory protein  ali model follow..  27  9..LSKVSFVIKKIRLEKGMTQEDLAYKSLDRTYISGIERNSRNLTIKALELIMKGLEVSDVVFFEMLIKEILKH..................................................................................................................................................................................................................... 81
53 -23.1002k9q_A mol:protein length:77 uncharacterized protein  ali model follow..  18  1...MELSNELKVERIRLSLTAKSVAEEMISRQQLCNIEQSETAPVVVKYIAFLRSKGVDLNALFDRIIVNKLE...................................................................................................................................................................................................................... 71
54 -23.0002ofy_A mol:protein length:86 Putative XRE-family transcriptional regulator  ali model follow..  16  15...QRLGELLRSAR--GDMSMVTVAFGI-SVETLRKIETGRITPAFFTIAAVARVLDLSLDDVAA.............................................................................................................................................................................................................................. 76
55 -23.0002b5a_A mol:protein length:77 C.BclI  ali model follow..  28  8..KRKFGRTLKKIRTQKGVSQEELAD--LHRTYISEVERGDRNISLINIHKICAALDIPASTFFRKMEEEN........................................................................................................................................................................................................................ 77
56 -22.8003lfp_A mol:protein length:98 Csp231I C protein  ali model follow..  21  2.....LIRRLKDARLRAGISQEKLGVLASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYLYTPEDD.......................................................................................................................................................................................................................... 70
57 -22.8005zyq_A mol:protein length:320 RNA polymerase-associated protein CTR9 homolog,RNA polymerase II-associated factor 1 homolog  ali model follow..  11  1MSRGSIEIPLRDTDEVIELDFDQLPE---GDEVISILKQEHT--QLHIWIALAGKTEEFVKLLEAARIDGNLDYRDHEKDQMTCL-KKDLITQATLLYTMADKIIMYDQNH-----LLGRACFCLLEGDKMDQADAQFHFVLNQSPNN------IPALLGKACISFNKKDYRGALAYYKKALRT------NPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKC------VGALVGLAVLELNNKEADGSENLYFQSGSRFVQYKATSLEKQHKHDLLTEPD 283
58 -22.7002ewt_A mol:protein length:71 putative DNA-binding protein  ali model follow..  22  6..AKQLGAKLRAIRTQQGLSLHGVEEKSWKAVVVGSYERGDRAVTVQRLAELADFYGVPVQELL............................................................................................................................................................................................................................... 70
59 -22.5003qq6_A mol:protein length:78 HTH-type transcriptional regulator sinR  ali model follow..  23  3...SMIGQRIKQYRKEKGYSLSELAEKAVAKSYLSSIERNQTNPSIQFLEKVSAVLDVSVHTLLDEKHETE........................................................................................................................................................................................................................ 72
60 -22.5001rio_A mol:protein length:98 Repressor protein CI  ali model follow..  17  17...RRLKAIYEKKKNELGLSQESVADKMMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSPSIAREIYEMYEAV................................................................................................................................................................................................................. 92
61 -22.3001y7y_A mol:protein length:74 C.AhdI  ali model follow..  23  11..LVKFGQRLRELRTAKGLSQETLAF--LDRSYVGGVERGQRNVSLVNILKLATALDIEPRELFC.............................................................................................................................................................................................................................. 74
62 -22.2002xiu_A mol:protein length:66 CYLR2  ali model follow..  20  2.....IINNLKLIREKKKISQSELAALLVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIFQWQPE.......................................................................................................................................................................................................................... 66
63 -22.2003zhi_A mol:protein length:83 CI  ali model follow..  17  1MLKTDTSNRLKQIMAERNLKQVDILNLSLSKSTLSAYVASVQSPDQNRIYLLAKTLGVSEAWLM............................................................................................................................................................................................................................... 74
64 -22.2002ef8_A mol:protein length:84 Putative transcription factor  ali model follow..  20  9...RCLVQLLTKLRKEASLSQSELAIFLLSQSDISKIESFERRLDALELFELLEVVASRLGLPMDILLKDTYESISK.................................................................................................................................................................................................................. 83
65 -22.2001utx_A mol:protein length:66 CYLR2  ali model follow..  20  2.....IINNLKLIREKKKISQSELAALLVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE.......................................................................................................................................................................................................................... 66
66 -22.2003bs3_A mol:protein length:76 Putative DNA-binding protein  ali model follow..  21  6NNQQMMLNRIKVVLAEKQRTNRWLAEQMKSENTISRWCSNKSQPSLDMLVKVAELLNVDPRQLIN.............................................................................................................................................................................................................................. 71
67 -22.2002kpj_A mol:protein length:94 SOS-response transcriptional repressor, LexA  ali model follow..  15  6.QKAIFSENLNSYIAKSEKTQLEIAKSIVSPQTFNTWCKGIAIPRMGKVQALADYFNINKSDLIEDKKLNI........................................................................................................................................................................................................................ 76
68 -22.0005j2y_A mol:protein length:80 Regulatory protein  ali model follow..  23  7TQPQNMAFRAKATRTARRESQETFWSRFISQSCGSRFENGENLPFIYLLLHFYIEGQITDRQLAD.............................................................................................................................................................................................................................. 73
69 -21.9002jvl_A mol:protein length:107 TrMBF1  ali model follow..  22  33...KEVGKAIEQGRQEPTMTQAELGKEIETAATVASYERGTATPDQNILSKMERVLNVKLRGAN............................................................................................................................................................................................................................... 96
70 -21.6003asd_A mol:protein length:200 MamA  ali model follow..  12  18....................................................................................HAKAGRYSQAVMLLEQVYDADAFDVDV------ALHLGIAYVKTGAVDRGTELLERSLADAPDN------VKVATVLGLTYVQVQKYDLAVPLLIKVAEA-------NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE------GKVHRAIAFSYEQMGRHEEALPH-FKKANEL..................... 173
71 -21.5003f6w_A mol:protein length:83 XRE-family like protein  ali model follow..  19  13...QALLDLLLEARSAAGITQKELAARLRPQSFVSKTENAERRLDVIEFMDFCRGIGTDPYALLSKLEAM......................................................................................................................................................................................................................... 80
72 -21.4004yvq_C mol:protein length:159 Protein FLUORESCENT IN BLUE LIGHT, chloroplastic  ali model follow..  16  9........................................................................................................................AAGLLLLAAQPAMA---MDIGINSDPIVEPKKQELISKLKTGKTFLRNQEPEKAYTEFKIALELAQSLK-DPTEEKKAARGLGASLQRQGKYREAIQYHSMVLAISKRESEDSGITEAYGAIADCYTELGDLEKAGK-FYDTYIARLE................... 151
73 -21.2003as8_A mol:protein length:186 Magnetosome protein MamA  ali model follow..  14  17...................................................................................SHAKAGRYSEAVVMLEQVYDADAFDVEV------ALHLGIAYVKTGAVDRGTELLERSIADAPDNIK------VATVLGLTYVQVQKYDLAVPLLVKVAEA-------NPVNFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE------GKVHRAIAYSYEQMGSHEEALPH-FKKANEL..................... 173
74 -21.2003asg_A mol:protein length:186 MamA  ali model follow..  12  18....................................................................................HAKAGRYSQAVMLLEQVYDADAFDVDV------ALHLGIAYVKTGAVDRGTELLERSLADAPDNVK------VATVLGLTYVQVQKYDLAVPLLIKVAEA-------NPINFNVRFRLGVALKNLGRFDEAIDSFKIALGLRPNE------GKVHRAIAFSYEQMGRHEEALPH-FKKANEL..................... 173
75 -21.2001per_L mol:protein length:69 PROTEIN (434 REPRESSOR)  ali model follow..  20  1....SISSRVKSKRIQLGLNQAELAQKVTTQQSIEQLENGKT-KRPRFLPELASALGVSVDWLLNGTSDSNVR...................................................................................................................................................................................................................... 69
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.