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Query: 2rg4_A mol:protein length:216 Uncharacterized protein, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSLAQIKSLFATRLYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGEGLast
1 -98.0002rg4_A mol:protein length:216 Uncharacterized protein  ali model  100  1MSLAQIKSLFATRLYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGEG 210
2 -91.6003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  81  1M----SLSLFVTRLYHAPLSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGRALELEDLWINILPEGGSHASHIHPHSVISGTTYVSMPGGTSALKLEDPRHAMMMAAPARRKTARDELRQFIYVTPAVGDVLLWESWLRHEVPMNMSEDDRISVSFNYRWAEG 206
3 -29.8003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  9  21MTIAAAIHALDADEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATSVTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRRVYEPFEAPFNFAPHCDDVSYGRDTVNWPLKRSFPRQLGGFLTIQGADNDAGMVMWDNRPESRAALDEMHAEYREERAAKIMLKPQPGQLTLFQSKNLHAIER--CTSTRRTMGLFLIHTED 267
4 -24.4005iqs_A mol:protein length:315 WelO5  ali model follow..  10  43YPTAIQDIIINRSFDGMIIRGVFPRDTMEQVARCLEEGNDGKSILNKNEEFGTKVAQIYGHAIVGQSPDLKDYFASSAIFRQACRTMFQGSPDFEEQVESIFHSLSIRLLLEGREIAVHLDLSDQLSYFIPLTVPEAGGELVVYSLEAQMQEYMDDVEFKIKSNQSQSVAYAPGPGDMLLFGGRYYHRVSEVIGNSPRRTIGGFLAFSKQ 300
5 -22.1004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  16  41..................QAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAIN-QGLFLGLEDFECHFALYPPGAFYRRHLDDRRMVSAVLYLNQPHDGGQLRMFLAD------------------GVEHDVEPVAGCLVVFLS-VPHEVLP--AGRERLSLT........ 212
6 -21.6002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  10  36..................VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLIRHCNGKLGS----INGRTKAMVACYPGNGTGYVRHVGDGRCVTCIYYLNDAKVSGGILRIFPEGK----------------AQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 213
7 -21.5002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  10  1MALPALKLALEYIVPCMNVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLIRHCNGKLG--SYKINGRTKAMVACYPGNGTGYVRHVDDGRCVTCIYYLN-AKVSGGILRIFPEGK----------------AQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 202
8 -21.5003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  14  1MGSDKIENLYFQGMLIE-IPNVFSKQEVSHLREQLDARRWIDGNQTSGAMAT------TRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPL---FNRYQGGETFGYHIDIRTDLSATLFLSEPEQGGELVIQD-------------------TYGQQSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMW....... 186
9 -21.4006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  11  59..................INNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRGDKIAWIGGDEKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYP-----GSGLGYIRHIDNGRCVTVLYYLNNSQDCGGQLWLYPNNE----------------NKVVKIDPIFDRLLLFWSRNPHEVKP--AYAMRYAIT........ 234
10 -21.0002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  10  31..................VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGR---KAMVACYPGNGTGYVRHVDDGRCVTCIYYLN-AKVSGGILRIFPEGK----------------AQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 208
11 -21.0004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  10  29..................VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTK--AMVACYPGNGTGYVRHVGDGRCVTCIYYLN-AKVSGGILRIFPEGK----------------AQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 206
12 -20.3005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  10  36..................VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGR---KAMVACYPGNGTGYVRHVDNGRCVTCIYYLNDAKVSGGILRIFPEGK----------------AQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 213
13 -20.1005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  12  31..................VDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGR---KAMVACYPGNGLGYVRHVDNGRCITCIYYLNDVKVHGGLLQIFPEGR----------------PVVANIEPLFDRLLIFWSRNPHEVKP--AYATRYAIT........ 208
14 -19.7005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  10  36..................VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRG-EPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTKAMVACY-----PGNGTGYVRHVDNCN-VTCIYYLNDAKVSGGILRIFPEGK----------------AQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 213
15 -18.3004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  13  7LTREQLY-IFDTTGFLV-IPGVFGSGEVESFRSELERLDTVDPGFPR--TRRYPDLPAASPVFARLALDDRLLAPVRDVVNQPLRLLEGYGLRRTKDSVLYLHGQVGRDLSITHTYHDGKLYCPYVKALVYLSQSPEDGSFCYVQGSHKANFPLLRERAERGEGFPTLSDVFVRSGDVLLLNEALMHGTRRKLTEGDRLLTAFGYGPT.. 230
16 -17.1003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  10  39.FQDGLKKEISQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRPNLFKLRQILSKQYRDFFGYVT-KAGKLSGSKTDMSINTYTKGCHLLTHDRRISFILYLPDPD-SHYGGGLRLFPS-----------ILPNVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQ........ 242
17 -17.1002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  10  36..................LRNVLDRDLVKTVAEQMREGLVALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIGTFWIRTTRESGGVALNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRMRMSMDTRVQPA 253
18 -16.9004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  11  18LEEDKIKGMFSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANSGLDWDDLSRLPNLFKLRQILSKQYRDFFGYVT-KAGKLSGSKTDMSINTYTKGCHLLTHDRRISFILYLPDPD-SHYGGGLRLFP-----------SILPNVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQ........ 239
19 -16.8003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  10  20.FQDGLKKEISQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANSGLDWDDLSRLPNLFKLRQILSKQYRDFFGYVT-KAGKLSGSKTDMSINTYTKGCHLLTHDRRISFILYLPDPD-SHYGGGLRLFP-----------SILPNVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQ........ 223
20 -16.6002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  10  23LTLEQRKFYEEN-VIKNLVPDADIQRFRNEFEKICRKEVKKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSG-LIVCAWTAMEHISRNN----------GCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADC 257
21 -16.2006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  13  57.......DVYSFPLFTPAF---------KEVIEVMDKA-NLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDINLAFVVKYDMERQSELAPHHDSSTYTLNIALNEYGKEAGGCEFIR--------------------HKFIWQGQKVGYATIHAGKLYHRALPITSGKRYILVSF....... 227
22 -16.2005epa_A mol:protein length:279 SnoK  ali model follow..  11  18LSKEAVRFYREQGYVH--IPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEAQAWQKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKRT-ATLTAWIALTDVPVER----------GCMSYVPGSHLRAREDRQEHMTSFAEFRDLADVWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDADA 238
23 -15.8004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  10  1MTTATLDRAAAIERFRRDAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLHREELAQLAAAFVDGPVVPTAYALVLKEPYRAAEVPWHRDTVCNLSICLDAGPHNGCLEA----PGSHLLPDDAEVAKVRATGPVVPVPVSQGDVVVHDVRLVHGSGPNANGSWRRTIVIEYADPAA 219
24 -15.8004xbz_A mol:protein length:334 EvdO1  ali model follow..  11  38LLPEHVTAFRRQ-VVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAG--HPLLLRIMEQL-----GPNLIPTWDSMVFKTPAGAPRLAWHRDAVIDAGIYLDPAPEDNCVWCIPESNYWGDATADQLNASEWDTTGAVPAVMQPGDLLLHNILTLHGAPAVVGKQRRIYFEYR...... 256
25 -15.7004xab_A mol:protein length:252 EvdO2  ali model follow..  9  1MDAMEVVGTIDHRILPQVASESEVAWLRQAYDRLFVRRATPAEDFYDIAGQRDREGPPLLPQIIKPEKYVPELLDSPH--FARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHRWRRRGLSIWTTLDATVESGCLHYLPGGHRGPVLPHHHIDNDDRDPTSAVACPLAPGGAVVHDFRTPHYAGPNLTDQPRRAYVLVFMSAPA 238
26 -15.6004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  11  23FSQDECAKIEAR------IDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEG---FVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCK----------FQFKPIRVSEPVLSLPVRRGSVTVLSGEITHCIRPQDIKERRAVIILR...... 211
27 -15.4004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  10  8RRDAEARRVKSGIKQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFFGEGYTERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEG---FVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCK----------FLFKPIRVSEPVLHLPVRRGSVTVLSGDITHCIRPQDIKERRAVIILRKTRADA 220
28 -15.2001lr5_A mol:protein length:163 Auxin binding protein 1  ali model follow..  15  42.......................................................................................................EVWLQTISPGQRTPIHRHSC---EEVFTV---KGKGTLLMGS--------------SSLKYPGQPQEIPFFQNTTFSIPVNDPHQVW-NSDEHEDLQV......... 119
29 -15.1004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  11  47FSQDECAKIEAR------IDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEG---FVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCK----------FQFKPIRVSEPVLSLPVRRGSVTVLSGYATHCIRPQDIKERRAVIILRKTRLDA 241
30 -15.0004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  13  35ISARQAAAFDRDGYIV--LEDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQS-NEIRSIFEIHAQSPVMARLAARLADVARFLLGD--------EVYIHQSRLNYKPGFKGREFYWHSDRALSMSVLLANTPHNGPLMVSSLKKQEYGVPDEESLAELAHRHGIVAPTGKPGTVILFDCNLMHGSNGNITPFPRANAFLVYNAVSN 270
31 -14.9005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  9  6LTADQVEKYKSDGYVL--LEGAFSPEEVHVMRQALKKDQEVQGPHRILEEDGRTASHTRQSVFDQLSRSDRLLGPATQLLECDLYIHQFKINTKRAFGGDSWA--W------------HLPAPRAVNVGVFLSVTEFNGPVVFLSGSHQRDYSMTPAELSQMVEKHPMVSPKAASGSVMLFHPEIIHGSAPNISPFARDLLIITYNDVAN 236
32 -14.7005apa_A mol:protein length:220 ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE  ali model follow..  10  23VNGLKAQPWWTPKETGYTELVKSLERNWKLIRDEGLAVMDKAKGLPEDENLREKGDWSQFTLWQQGRRNENACKGAPKTC--------TLLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPNCRLRMHLGLVIPKEGCKIRCANETKT------------------------EEGKVLIFDDSFEHEV--QDASSFRLIFIVDV..... 198
33 -14.7005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  10  41..................VPGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTVDAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENKEK-----------DASVPTAPHHDAGTALTAWVALVVPVERGCMTFVPGSDTGDEPWAGAFTRPGEIWMPRVTVPLRAGDCTFHHARTVHSAGANSTDEPRLSTSAVYMDAT. 240
34 -14.6004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  12  75.........FLHCVIPNFIQS---QDFLEGLQKELMNLDFHEKYND----------YKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMS---CAKYEFTDALLCHELEGRRIAFILYLV-RSMGGTLDLYSID------------EHFQPKQIVKSLIPSWNKLVFFSPVSFHQVEVLSEEKSRLSIS........ 248
35 -14.5006EC3 Entity 1(prereleased)  ali follow..  13  248RLGAQIRRFREDGFVNAGFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLF--RPELAELAAAF-----GSPVVPTAFALVLKEPKRAAGVPWHPHTVCNLSICLDAGPENGCLEG----PGSHLLPDDIDVPEIRDGGPRVPVPSKVGDVIVHDVRLVHGSGPNPSDQWRRTIVIEFANPA. 457
36 -14.3003emr_A mol:protein length:310 EctD  ali model follow..  11  35ITKEQLDSYEKNGFLQ--IKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES-NDIRSIFHVHQDDNYFQDVAKRILDIVRHLLGS--------DVYVHQSRINYKPGFKGKEFDWHSDRAISVSIALSNYSFNGPLMLIPGSHNYFVS-EESLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSVKN 271
37 -14.3004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  10  41..................IEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLADVHNLVDFSHCFRHENHELLHKICRLTFE-----ESGDYWLGYGAVIENGPGTTEQKHRDPEGMLNFFTALDFDAETGKTQYILGSNK-------VELGEPDADHPIEYVGLKPGDTTIVSGKITHRGSDNRSDKMRRAMPIMII.... 242
38 -14.0001v70_A mol:protein length:105 probable antibiotics synthesis protein  ali model follow..  18  34............................................................................................................ALLPGQAQKVHVHEGS--DKVYYA---EGEVVVRVGEEE-----------------------ALLAPGMAAFAPAGAPHGVRNESASPALLLVVTA...... 102
39 -14.0005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  9  41.............IVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNLPFAHEVLEKVFKK-----DSGDYWLNMGNILNMLPGAAQRPHRDDYLYINITFPLEFRHDNGGTLLLPKSHT-------PNADFYANAEDLPAAEMQVGDALIFTGKCVHGGGANRSDKPRIGLALAAQ.... 239
40 -13.9005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  9  42.............IIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKR--VTTSPTFRHEILENDLMHELLQRV----------FSKPGEGMGYHFNDTMVIEVQPGA-QRLHRAPECLVNFFCAVTTVENGATRLVPGSNRWPELTLINATDCPQYGKIDSVPAIMQPGDCYMMSGKVIHGAGHNATSDQRRALAFSTI.... 244
41 -13.9002xl7_A mol:protein length:239 SLL1785 PROTEIN  ali model follow..  9  28....................................................................................NEIFDIASCSAKDIGFAIAHA---QIPPGGGPMPHIHYFI--NEWFWT-----EGGIELF--STKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM...... 137
42 -13.6002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  11  10LTAEQRASIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDLDAISGGTNIANYDRHLDDDFLASHICRPEICDRVESILGPNVLCWRTEFFPKYPGDE-GTITVWTAFTDANIAN-PGTQNSMNYDETKRMTYEPDANNSVVKDGVRRGFFGYDQIDENWKPDEASAVPMQMKAGQFIIFWSTLMHASYPHESQEMRMGFASRYVPSF. 262
43 -13.5002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  12  4LSPSQLQKFQQD-VLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTGHALHAHDPVFKSITH--SFKVQTLARSL----QMPVVVQSMYIFKQPHFGGEVSPHTEPLGRVLGVWIADATLENGCLWFVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASG 269
44 -13.5005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  12  36..................IEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMNDELLHGLCKRLFGP-----ESGDYWLTTSSVLETEPGYGQELHRSPESMLNFLTALDFTAENGATRV--PGSHLW----EDFSAPPPKADTAIPAVMNPGDAVLFTGKTLHGAGKNNTDFLRRGFPLIMQ.... 230
45 -13.2001o4t_A mol:protein length:133 putative oxalate decarboxylase  ali model follow..  25  57............................................................................................................KLPPGSSVGLHKHEGE--FEIYYI---LGEGVFHDNGKD-----------------------VPIKAGDVCFTDSGESHSIE-NTGNTDLEFLAV....... 123
46 -13.2003nnf_A mol:protein length:344 CurA  ali model follow..  8  39..................IKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNAL-FSFTKTEDFGASIWIPLVSTKIFPGQFYYSVFDLHLKNNIKWDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHRRAFVIRLVDYDT 271
47 -13.2005ybm_A mol:protein length:314 PrhA  ali model follow..  12  42.............VIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKR--VIASPTFRNEIIESDLMHELCDRV----------FSKPGEGMGYHFNDNMVIEVQPGA-QRLHRDPECVINFFCAVPFTEENGATRL-GSHLWPEFTQINERDCPQFGKIETVPAIMQPGDCYLMSGKVIHGAGHNATTDRRRALALAII.... 244
48 -13.2005j7m_A mol:protein length:123 Cupin 2 conserved barrel domain protein  ali model follow..  23  42............................................................................................................SVPPGDESPIDQHPE---LELSIV---AGTAHVTVGDT-----------------------VHEVPHGNAFLLNSLEAHVVQ-NRSADEVLTV......... 105
49 -13.1003h8u_A mol:protein length:125 uncharacterized conserved protein with double-stranded beta-helix domain  ali model follow..  17  3.............................................................GVNMRAETESRIFSVDEYVRPSNGEPIRSVVLETNDSVVVVW-----HAHPGQEIASHVHPHG--QDTWTV---SGEAEYHQGNGI----------------------VTHLKAGDIAIAKPGQVHGAM-NSGPEPFIFVSV....... 112
50 -13.1005tfz_A mol:protein length:150 dimethylsulfoniopropionate lyase DddK  ali model follow..  22  60............................................................................................................EIAPGGDLTLHYHSP---AEIYVV---NGKGILNKSGKL-----------------------ETIKKGDVVYIAGNAEHALKNNGKETLEFYWIFP...... 127
51 -13.1005jqy_A mol:protein length:429 Aspartyl/asparaginyl beta-hydroxylase  ali model follow..  11  262........................ERNWKLIRDEGLAVMDKAKGLFLPEDENLREKWQQGRRNENACKGAPKTCTLLEKFPETTGC--------------RRGQIKYSIMHPGTHVWPHTGPNCRLRMHLGLVIPKEGCKIRCANETKT------------------------EEGKVLIFDDSFEHEV--QDASSFRLIFIVDV..... 413
52 -13.0003gja_A mol:protein length:319 CytC3  ali model follow..  8  12FSPEEVARFERDGYIGPVFEPEEMTRRWNIIRRQLLDRSLAYPDSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEFFPKYQGDE-GTITVWTAFTHSTEQNGLQLMPGTHTSMNYDESKGMDYDADAINQREKDGIYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWSNTMHASLPHTGSKTRMGFAARYVPTQV 265
53 -13.0004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  13  107.............VELAYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFSNDGHRIRKPHKDNLDIPSSLFYFGNFQTEGYLELTD----------------------NCKVFVQPGDVLFFKG-YKHVVAN--TSGWRIGLVY....... 294
54 -13.0004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  7  4.........WSHPQFEKGATTRILGVVQLDQRRLTDDLAVLAKSNFSSEYSDFACGRWEFCMLRNQSGKQEEQRVVVHETPALATPLGQSLPYLNELLD-SIRYARIIRISENACIIPHRDYLELEGKFIRVHLV---------------------DTNEKCSNTEENNIFHMGRGEIWFLDASLPHSAG-CFSPTPRLHLVVDIEGTR. 187
55 -12.9003kgz_A mol:protein length:156 Cupin 2 conserved barrel domain protein  ali model follow..  16  51.............................................................................................................VDEGGYSTLERHAH---VHAVMI---RGHGQCLVGET-----------------------ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVN...... 117
56 -12.9005fq0_A mol:protein length:114 KDGF  ali model follow..  18  39.............................................................................................................FDRGAVGTPHQHERH--DQIGYV-----QGAFEVE----------------------EGEKRRLSPGDAFVAPHHTMHGAVALEPDSLVIDL......... 103
57 -12.9003sxw_A mol:protein length:201 Glucose-6-phosphate isomerase  ali model follow..  13  79...........................................................................................................KVGKEFFFAKGHFHAKLDRAQVAVA---KGKGGVLMQTPEGDAKW------------------ISSEPGTVIYSPPYWAARAV-NIGDEPFIMLVI....... 153
58 -12.8004e2g_A mol:protein length:126 Cupin 2 conserved barrel domain protein  ali model follow..  18  48.............................................................................................................IEPNTEMPAHEHPHEMLEGTLELTIGEETRVL--------------------------------RPGMAYTIPGGVRHRARTFEDGCLVLDI......... 111
59 -12.8001fi2_A mol:protein length:201 OXALATE OXIDASE  ali model follow..  21  79.............................................................................................................FAPGGTNPPHIHPRA--TEIGMVMKGELLVGILGSLDSGNKLYSR-----------------VVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFN...... 154
60 -12.8002i45_A mol:protein length:107 Hypothetical protein  ali model follow..  8  8...................................................................................LKQHLAAIKEYWQPEIINRHGFQFHLVKLLGDYGWHTHGYS--DKVLFA-----EGDMAVD--------------------FADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVL........... 97
61 -12.8003ht1_A mol:protein length:145 RemF protein  ali model follow..  20  45............................................................................................................EVSPNGSTPPHFHEW---EHEIYV---EGSMGLVLPDQGR---------------------TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAP...... 114
62 -12.7004lta_A mol:protein length:189 Glucose-6-phosphate isomerase  ali model follow..  12  77...........................................................................................................KVGKEFFFTKGHFHAKLDRAEVYVA---KGKGGMLLQTPEGDA------------------KWISMEPGTVVYVPRGWAHRTVNIGDEPFIFLAIYP...... 153
63 -12.7004h7l_A mol:protein length:157 uncharacterized protein  ali model follow..  11  49..........................................................................................................VHYTQITKAARTHYHREH--QEIYVVLDHAAHATIELNGQS-----------------------YPLTKLLAISIPPLVRHRI---VGEATIINI......... 115
64 -12.7004mv2_A mol:protein length:128 plu4264  ali model follow..  17  40............................................................................................................IVRPETKSFRHSHNE---YELFIV---QGNAIIRINDED-----------------------FPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIW....... 106
65 -12.7002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  9  11EWRGEVVHLSWSP-RAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTM--------LENHEGLQVLH-----YHDGQKYEPHYDGQRVVTMLMYLTTVEEGGETVLPN------AEQKVTGDGWSECAKRGLAVKPIKGDALMFYS-SLHGSCPTLKGDKWSATKW....... 217
66 -12.6003ibm_A mol:protein length:167 Cupin 2, conserved barrel domain protein  ali model follow..  15  62............................................................................................................EVEPGGYTTLERHEH---THVVMV---RGHAEVVLDDR-----------------------VEPLTPLDCVYIAPHAWHQIH-ATGANEPLGF......... 125
67 -12.6003jzv_A mol:protein length:166 uncharacterized protein Rru_A2000  ali model follow..  16  59............................................................................................................EVGPGGHSTLERHQH---AHGVMI---KGRGHAMVGRA-----------------------VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVN...... 126
68 -12.6005wsd_A mol:protein length:118 Uncharacterized protein tm1459  ali model follow..  17  46............................................................................................................TVEPGGLIDRHSHPW---EHEIFV---KGKLTVLKEQGE-----------------------ETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIP...... 113
69 -12.5001e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  11  1MRSHILGKI---------------ELDQTRLAPDLAYLAAVPTVEEEYDEFSNASGDSEDRLYRDLKDAAAQPTAHVEHV-PYLKEIVTTV------FDGTHLQMARSRNLKNAIVIPHRDFVELDR--TFMVLEDSPLAFHSNEDT----------------------VIHMRPGEIWFLDAATVHSAV-NFSEISRQSLCVDFAFDG. 179
70 -12.4001vj2_A mol:protein length:126 novel manganese-containing cupin TM1459  ali model follow..  17  48............................................................................................................TVEPGGLIDRHSHPW---EHEIFV---KGKLTVLKEQGE-----------------------ETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLI....... 114
71 -12.4005fpx_A mol:protein length:113 PECTIN DEGRADATION PROTEIN  ali model follow..  16  40.............................................................................................................FDKGAIGVAHKHDIH--DQIAYV-----AGSFEVE----------------------EGQKRILKAGDAYRAVKNEMHGAVSLEDNSILIDT......... 104
72 -12.4002d40_A mol:protein length:354 putative gentisate 1,2-dioxygenase  ali model follow..  14  1.............MGSSGSMTDNNQNSREQFYQHISGQNLTPLWESLHHLVPKTPNANCAPAYWNYQEIRPLLLESGGLIGAKEAV-LENPALRGQSSITATLYAGLQLIMPGEVAPSHRHNQ---SALRFI---EGKGAFTAVDGE----------------------RTPMNEGDFILTPQWRWHDHG-NPGDEPVIWLDG....... 166
73 -12.3005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  8  36..................IESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNH--TTTRLVNVLAPISKAYREDNSKVLHRICSDAFH-----VYGDYWVLMGAVMELAPSNAQPLHRAPATSINFLVALPFTAENGATHVILGSHK--------QNLSNVSMDATVRALMNPGDALLITDSTIHCGGAETTTETRRLLTITM..... 231
74 -12.3003lag_A mol:protein length:98 uncharacterized protein RPA4178  ali model follow..  18  18.......................................................................................................RVTEWRLPPGSATGHHTHGMDYV--VVPMA----DGEMTIVAPDG------------------TRSLAQLKTGRSYARKAGVQHDVR-NESTAEIVFLEIEL..... 94
75 -12.3001x7n_A mol:protein length:190 Glucose-6-phosphate isomerase  ali model follow..  16  78...........................................................................................................KVGKEFFFTKGHFHAKLDRAEVYVA---KGKGGMLLQTPE------------------GDAKWISMEPGTVVYVPPYWAHRTV-NIGDEPFIFLAI....... 152
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.