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Query: 2wb3_A mol:protein length:157 HYALURONIDASE-PHAGE ASSOCIATED, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst TNAVNIVMRQPTTPNFSSALNITSANEGGSAMQIRGVEKALGTLKITHENPSVDKEYDENAAALSIDIVKKQKGGKGTAAQGIYINSTSGTAGKMLRIRNKNKDKFYVGPDGDFWSCASSIVDGNLTVKDPTSGKHAATKDYVDEKIAELKKLILKKLast
1 -106.0002wb3_A mol:protein length:157 HYALURONIDASE-PHAGE ASSOCIATED  ali model  100  1TNAVNIVMRQPTTPNFSSALNITSANEGGSAMQIRGVEKALGTLKITHENPSVDKEYDENAAALSIDIVKKQKGGKGTAAQGIYINSTSGTAGKMLRIRNKNKDKFYVGPDGDFWSCASSIVDGNLTVKDPTSGKHAATKDYVDEKIAELKKLILKK 157
2 -98.4002wh7_A mol:protein length:178 HYALURONIDASE-PHAGE ASSOCIATED  ali model follow..  80  14HNAVNIVMRQPTTPNFSSALNITSANEGGSAMQIRGVEKALGTLKITHENPSVDKEYDKNAAALSIDIVKKQKGGKGTAAQGIYINSTSGTTGKLLRIRNLNDDKFYVKPDGGFYAKETSQIDGNLKLKDPIANDHAATKAYVDGEVEKLKALLAAK 170
3 -32.4002dp5_A mol:protein length:332 Hyaluronidase  ali model follow..  71  176TNAVNIAMRHATTPNFSSALNITSGNENGSAMQLRGSEKALGTLKITHENPSIGADYDKNAAALPLDL-SKRQNGAGTAAQGIYINSTSGTTGKLLRIRNLSDDKFYVKSDGGFYAKETSQIDGNLKLKDPTANDHAATKAYVDKAISELKKLILKK 331
4 -31.2002c3f_A mol:protein length:358 HYALURONIDASE, PHAGE ASSOCIATED  ali model follow..  76  197TNAVNIAMRQPTTPNFSSALNITSGNENGSAMQLRGSEKALGTLKITHENPSIGADYDKNAAALSIDIVKKTN-GAGTAAQGIYINSTSGTTGKLLRIRNLSDDKFYVKSDGGFYAKETSQIDGNLKLKDPTANDHAATKAYVDKAISELKKLILKK 352
5 -15.6004ufq_A mol:protein length:217 Hyaluronidase  ali model follow..  41  37NHAATI--YQAGTSGDGAALNVISDNPGTSAMYLSGTETARGTLKITHRGYADGSDKDAAALSLDL-------RVAGTAAQGIYVTATNGTKGNLIALRNNGLDDFVVKGTGRI........................................... 143
6 -6.6001w8x_N mol:protein length:126 PROTEIN P31  ali model follow..  15  1...................MNVNNPNQMTVTPVYNGCDSGEGPQSVRGYFDAVA------GENVKYDLTYLADTQGFTGVQCIYIDNAENDTGQRIKCPAGKQGYFPLLVPGRAKFVARHLGSGKKSV............................. 112
7 -6.2404ayd_C mol:protein length:257 FACTOR H BINDING PROTEIN  ali model follow..  15  117......................MVAKRQFRIGDIAGEHTSFDKLRATYRGTAFGSDDAGGKLTYTIDFAAKQGNGKIEHLKSPELNKPDGKRHAVISGSVLYNQAEKGSYSLGIFGGKAQEVAGSAEVKTVNGIRHIG--------LAAKQEL.... 251
8 -6.1405dn6_I mol:protein length:148 ATP synthase epsilon chain  ali model follow..  11  2............................................................ADTMQFDLVSPERNLVSVPVREVRLPGADGDLTAMVTVVAGDGSETEFAVTGGFAEINNESVT----LAERGHPRAEMTQEVFNEMMAQARRRVEAA 109
9 -6.1202vo8_A mol:protein length:143 EXO-ALPHA-SIALIDASE  ali model follow..  6  36NGDTEVYSAEYLFEYNAEAFILNEITSFNDSLFVKSKEVEPGKVRILVASLGNEIEKDSDLVKVNLTPKISSELEVLGLTTALVGAGD..................................................................... 123
10 -6.0505o14_A mol:protein length:257 Factor H binding protein variant 1.1  ali model follow..  15  117......................MVAKRQFRIGDIAGEHTSFDKLRATYRGTAFGSDDAGGKLTYTIDFAAKQGNGKIEHLKSPELNKPDGKRHAVISGSVLYNQAEKGSYSLGIFGGKAQEVAGSAEVKTVNGIRHIG................... 244
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.