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Query: 2xdv_A mol:protein length:442 MYC-INDUCED NUCLEAR ANTIGEN, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SMAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLQVESTTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDETQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFPLSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVVLast
1 -110.0002xdv_A mol:protein length:442 MYC-INDUCED NUCLEAR ANTIGEN  ali model  100  1SMAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLQVESTTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDETQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFPLSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV 442
2 -92.1004diq_A mol:protein length:489 Lysine-specific demethylase NO66  ali model follow..  29  29VLAELNRIPSSRRRAARLFEWLIAPMPPDHFYRRLWEREAVLVRRQDH---TYYQGLFSTADLDSMLRNEEVQFGQHLDAARYINGRRETLNPPGRALPAAAWSLYQAGCSLRLLCPQAFSTTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEESSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDG-VHSLHLTLSTYQRNTWGDFLEAILPLAVQAAMEENVEFRRGLPRDFMDYMGAQDSKDPRRTAFMEKVRVLVARLGHFAADQRAKDFIHDSLPPVLTDRERALSVYGLPIRWEAGEVGAQLTTETEVHMLQDGIARLVGEGGHLFLYYTVENSRVY------HLEEPKCLEIYPQQADAMELLLGSYPVRVGDLPCDSVEDQLSLATTLYDKGLLLT. 475
3 -90.1004y4r_A mol:protein length:454 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66  ali model follow..  30  13VLAELNRIPSSRRRAARLFEWLIAPMPPDHFYRRLWEREAVLVRRQDH---TYYQGLFSTADLDSMLRNEEVQFGQHLDAARYINGRRETLNPPGRALPAAAWSLYQAGCSLRLLCPQAFSTTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRVPTEESSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDG-VHSLHLTLSTYQRNTWGDFLEAILPLAVQAAMEENVEFRRGLPRDFMDYAQHSDSKDPRRTAFMEKVRVLVARLGHAVADQRAKDFIHDSLPPVLTDRERALSVYGGGG---------QLTTETEVHMLQDGIARLVGEGGHLFLYYTVENSRVY------HLEEPKCLEIYPQQADAMELLLGSYPVRVGDLPCDSVEDQLSLATTLYDKGLLLT. 447
4 -79.6004csw_A mol:protein length:406 CUPIN 4 FAMILY PROTEIN  ali model follow..  14  1.....SSGLVPRGSHMQLPETILGGLAPEEFLANYWQKRPLLIRQALP----GFRSPITPEELAGLACEEGVTARLILEKGGAY----PWEVRYGPFEPEDFVALPPTHWTLLVQEVDRLVPEVAALLETVRFVPNWRLDDIMVSYAPEGGTVGAHIDNYDVFLVQAWGRRRWQINHRPVEREEPGLEVRLLAHFEPDAEWILEPGDVLYLPPRIPHYGVALED---CMTFSIGFRAPDQ-----AELAEAMPRMAAWLDGGRRYADPDLTPADE-PGEITPEALDQIQALLRALIDD--RERLARWFGCIITEPRRGLPPEPPGRPLSAKQLHRRLQQGATLRRNAIPELAYVRHADGSA------------------------TLFASGEAYELSPELADVAPLLTGRRPLTAETLPWLERDDFLELLQTLIHSGILSLI 397
5 -78.4004lit_A mol:protein length:407 50S ribosomal protein L16 arginine hydroxylase  ali model follow..  11  10PRGSHMASMTGGEEMGRGSMEYQLTLNWPDFLERHWQKRPVVLKRGFNN----FIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHG--------PFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALEN---AMNYSVGFRAPN-TRELISGFADYVLQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQ------PEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVY--------------------------------NGEKIDSPHRPALDALASNIALTAENFGDLEDPSFLAMLAALVNSGYWFF. 399
6 -77.4004nub_A mol:protein length:384 50S ribosomal protein L16 arginine hydroxylase  ali model follow..  11  2....................EYQLTLNWPDFLERHWQKRPVVLKRGFNN----FIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHG--------PFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGAALQMKQHPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALEN---AMNYSVGFRAPN-TRELISGFADYVLQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQ------PEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVY--------------------------------NGEKIDSPHRPALDALASNIALTAENFGDLEDPSFLAMLAALVNSGYWFF. 371
7 -69.5001vrb_A mol:protein length:342 Putative asparaginyl hydroxylase  ali model follow..  20  3......SDKIMSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGE----VERFTSIPGFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQA---TLALNITFGQPAW-----LDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAET................................................................................................................................................ 303
8 -25.6006f4s_A mol:protein length:255 JmjC domain-containing protein 5  ali model follow..  14  1..SSGVDLGTENLYFQSTVPR-LHRPSLQHFREQFLPGRPVILKGVADHWPAM--QKWSLEYIQEIAGA-----RTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISI--EEEITICAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVLSCILSPGEILFIPVKYWHYVRALDL---SFSVSF................................................................................................................................................................................................................. 246
9 -25.6006f4o_A mol:protein length:255 JmjC domain-containing protein 5  ali model follow..  15  1..SSGVDLGTENLYFQSTVPR-LHRPSLQHFREQFLPGRPVILKGVADHWPCM--QKWSLEYIQEIAGC-----RTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISI--EEEITINAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVLSCILSPGEILFIPVKYWHYVRALDL---SFSVSF................................................................................................................................................................................................................. 246
10 -25.4006f4p_A mol:protein length:255 JmjC domain-containing protein 5  ali model follow..  15  1..SSGVDLGTENLYFQSTVPR-LHRPSLQHFREQFLPGRPVILKGVADHWPAM--QKWSLEYIQEIAGA-----RTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISI--EEEITINAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVLSAILSPGEILFIPVKYWHYVRALD---LSFSVSF................................................................................................................................................................................................................. 246
11 -25.2003uyj_A mol:protein length:248 Lysine-specific demethylase 8  ali model follow..  15  19......................LHRPSLQHFREQFLPGRPVILKGVADHWPCM--QKWSLEYIQEIAGC-----RTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISI--EEEITINAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVLSCILSPGEILFIPVKYWHYVRALDL---SFSVSF................................................................................................................................................................................................................. 245
12 -25.0004gaz_A mol:protein length:252 Lysine-specific demethylase 8  ali model follow..  15  15......................LHRPSLQHFREQFLPGRPVILKGVADHWPCM--QKWSLEYIQEIAGC-----RTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISDGEEEEITINAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVLSCILSPGEILFIPVKYWHYVRALD---LSFSVSF................................................................................................................................................................................................................. 241
13 -24.6006f4n_A mol:protein length:271 JmjC domain-containing protein 5  ali model follow..  15  42......................LHRPSLQHFREQFLPGRPVILKGVADHWPCM--QKWSLEYIQEIAGC-----RTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISI--EEEITINAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVLSCILSPGEILFIPVKYWHYVRALDL---SFSVSF................................................................................................................................................................................................................. 268
14 -23.7004zxa_A mol:protein length:168 Hydroquinone dioxygenase small subunit  ali model follow..  14  15...................................................................................................ASLDNFRKGTVEIISGEARHYIFEVAQNSKPYEKVVVGLNLGYVVETLRAEGQSPWFTAAHDEFAIVMDGEVRVEFLKLDAPSKHGEGTAGELPVGKPMGYVLLKRGHQCLLPAGSAYRFEASRPGVILQQTIKGPLSVEKWAEICLK................................................................................................................................................................................................... 168
15 -22.4003al5_A mol:protein length:338 JmjC domain-containing protein C2orf60  ali model follow..  15  7GLEVLFQGPLHMAGQHLPVPR-LEGVSREQFMQHLYPQKPLVLEGIDLGPC----SKWTVDYLSQVGGKKEVK---IHVAAVAQMDFISKNFVYRTLPFDQLVQRAAEEKHKDVADIRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVSKARRYECSLEAGDVLFIPALWFHNVISEE---FGVGVNI................................................................................................................................................................................................................. 265
16 -21.9005nfn_A mol:protein length:335 JmjC domain-containing protein 7  ali model follow..  14  24SELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPRPCIIRNALQHSLPYFRATVGSTEVSVAVTPDGYADA---VRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEANFWLGEAAAVT-SLHKDHYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATSQAQALRCTVRAGEMLYLPALWFHHVQQSQ---GCIAVNFWYDMEYDLKYSYFQLLDSLTK............................................................................................................................................................................................ 324
17 -21.8002y0i_A mol:protein length:352 HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR  ali model follow..  14  24GALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEPVVLTDTNLVDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRLQQTLNDTVGRKIVM--QQGKRGWGQLTSNLLLIGMEGN--TPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFVVGPGDVLYIPMYWWHHIESLLNGGITITVNF................................................................................................................................................................................................................. 298
18 -21.7006fqc_A mol:protein length:403 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6  ali model follow..  11  33.....ESFSLSPAAVADNVERAALQLSVEEFVERY-PYKPVVLLNAQEGWSAQ--EKWTLERLKRKYRN-----QKFKCGEDNDGYSVKMKMKY----IEYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKV--KRRPPYRWFVMGPPRSGTGIHIDPLSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDELEILQKPGETVFVPGGWWHVVLNLDT---TIAITQNFASSTNFPVVWHKTVRGRPKLSRKWYRILKQEHPELAVLADSVDLQESTGIASDSSSDSSSSSSSSSSDSDSECESGSEGDGTVHRRKKRRTCSMVGNGDTTSQDDCVSKERSSSR............................................................................................ 403
19 -17.7003k3n_A mol:protein length:371 PHD finger protein 8  ali model follow..  12  8.......RSRTFDSSDEVILKP-NQLTVEFLEENSF-SVPILVLKKDGLGMTLPSPSFTVRDVEHYVSDKEIDVIDVTRQADCKMKLGDFVKYYYSGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERCLMSVRDSYTDFHIDGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMYKCSVKQGQTLFIPTGWIHAVLTPVD---CLAFGGNFLHSLNIEMQLKAYEIELSTADLFRFPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEIPETVRTVQLIKD............................................................................................................... 348
20 -17.3004do0_A mol:protein length:374 Histone lysine demethylase PHF8  ali model follow..  13  19.......RSRTFDSSDEVILKPTGNQLTVEFLEENSFSVPILVLKKDGLGMTLPSPSFTVRDVEHYVSDKEIDVIDVTRQADCKMKLGDFVKYYYSGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERCLMSVRDSYTDFHIDGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMYKCSVKQGQTLFIPTGWIHAVLTPVD---CLAFGGNFLHSLNIEMQLKAYEIELSTADLFRFPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEIPETVRTVQLIKD............................................................................................................... 359
21 -16.6003ptr_B mol:protein length:392 PHD finger protein 2  ali model follow..  12  35.......RSRTFPSAEDVVARV-SQLTLGYMEEHGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKCLICVKDSYTDFHIDGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMYKCIVKQGQTLFIPSGWIYATLTPVD---CLAFAGHFLHSLSVEMQMRAYEVE............................................................................................................................................................................................... 293
22 -16.1002opk_A mol:protein length:112 Hypothetical protein  ali model follow..  12  1............................................................................................................GMDPKHGNLFADVPV-DEIFQPLLERKGLKIE-RIISNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGDTA-------------------PRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAV................................................................................................................................................................................................................. 107
23 -16.0005v26_A mol:protein length:201 3-hydroxyanthranilate 3,4-dioxygenase  ali model follow..  17  59..............................................................................................................................................VTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVD-----------------GRRERADLKEGDIFLLPPHVRHSHQRPEAGSACLVIE-RPAGMLDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYASEDKRR................................................................................................................................................................ 182
24 -16.0003fe5_A mol:protein length:285 3-hydroxyanthranilate 3,4-dioxygenase  ali model follow..  11  4.................................................................................................................VRVKAWVEENRGSFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEGDMLLRVLER-----------------GKHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYYVGDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQYRTGKPNPDQLLKEPPFPLSTRSVMEPMCLEAWLDGHRKELQAGTPLSLFGDTY---------------ESQVMVHGQGSSEGLRRDVDVWLWQLEGSSVVTMEGQRLSLLDDSLLVPAGTLYGWERGQGSVALSVTQDPACKKSL................. 284
25 -15.9005tk5_A mol:protein length:290 3-hydroxyanthranilate 3,4-dioxygenase  ali model follow..  11  9.................................................................................................................LGVRAWVKENRGSFQPPVCNKLMHQEQLKVMFIGGPNTRKDYHIEEGEEVFYQLEGDMVLRVLEQ-----------------GKHRDVVIRQGEIFLLPARVPHSPQRFAN---TVGLVVERRRLETELDGLRYYVGDTMDVLFEKWFYCKD-----------LGTQLAPIIQEFFSSEQYRTGKPIPDQLLKEPPFPLSTRSIMEPMSLDAWLDSHHRELQAGTPLSLFGDTYETQVIAYGQGSSEGLRQNVDVWLWQLEGSSVVTMGGRRLSLAPDDSLLVLAGTSYAWERTQGSVALSVTQDPACKKPL................. 289
26 -15.9001lr5_A mol:protein length:163 Auxin binding protein 1  ali model follow..  15  45...............................................................................................................................................LQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQ------------EIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVI................................................................................................................................................................................................................. 122
27 -15.7004qwn_A mol:protein length:329 Lysine-specific demethylase 2A  ali model follow..  10  11..........TNKYNANFVTFMEGKDFNVEYIQRGGLRDPLIFKNSDG-TVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMSVRGCYTDHVDGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGKQGDIQRIELKQGYTFVIPSGWIHAVYTPTD---TLVFGGNFLHSFNIPMQLKIYSIE............................................................................................................................................................................................... 280
28 -15.7002o8q_A mol:protein length:134 Hypothetical protein  ali model follow..  17  33..................................................................................................................................VNEATGGMFGAHVIRAIPGKEAKPTHTVGFQLFYV-LRGWVEFEYEDIG--------------------AVMLEAGGSAFQPPGVRHRELRHSDDLEVLEIVSPAGFATSVVDL...................................................................................................................................................................................................... 128
29 -15.6003kmh_A mol:protein length:246 D-lyxose isomerase  ali model follow..  13  11......................................................RGSMKRSAINDILGHTRFSQHDVHLPPFASFSPAQWQQLDTAAWEEVRNNFAAHGLTLFRNGSAKGMPYVKCYAEKI-----------MHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGTAGSQLRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVSSVNDDDHDNHFLQPLDRY--NLIDEDEPAQLVLCNEY........................................................................................................................................................................... 236
30 -15.4004qsz_A mol:protein length:687 Maltose-binding periplasmic protein, JmjC domain-containing protein 7 chimera  ali model follow..  14  397...............PRVVPYLDEPPSPLCFYRDW-PNRPCIIRNALQHWPAL--QKWSLSYLRATVGSTEVS---VAVTPDGYAMPAERRLPISHVLDVLEGRAQHPGVLYVQKQCSNLPTELPQLLSDIESHVPWASESNFWLGDASAVT-SLHKDHYENLYCVVSGEKHFLLHPPSDRPFIPYNLYTPATSQAQALHCTVRAGEMLYLPALWFHH---VQQSHGCIAVNFWYDMEYDLKYSYFQLMDTLTRATGLD....................................................................................................................................................................................... 687
31 -15.3003lwc_A mol:protein length:119 Uncharacterized protein  ali model follow..  17  1............................................................................................................GKTMKMRKFTIADASLERVGNLVDERHGGPITIGYGRYAPGQ-SLTETMAVDDVMIV-LEGRLSVSTDGE---------------------TVTAGPGEIVYMPKGETVTIRSHEEGALTAYVTY................................................................................................................................................................................................................. 111
32 -15.1003ht1_A mol:protein length:145 RemF protein  ali model follow..  22  46................................................................................................................................................VSPNGSTPPHFHEWEHEIYVLE--GSMGLVL-------------------PDQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCERPPVRNVFLSED.................................................................................................................................................................................................. 128
33 -15.0004hsl_A mol:protein length:174 3-hydroxyanthranilate 3,4-dioxygenase  ali model follow..  16  2...............................................................................................................LTYGAPFNFPRWIDEHAHLLKPPVGNRQDFIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVD-----------------GRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIA-RPAGMLDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYASEDKRR................................................................................................................................................................ 161
34 -15.0002i45_A mol:protein length:107 Hypothetical protein  ali model follow..  12  1...............................................................................................................MQNETIN-LKQHLAAIKEYWQPEIINRHGFQFHLVKLLGDYGWHTHGYSDKVLFAVEGDMAVDFADGG--------------------SMTIREGEMAVVPKSVSHRPRSENGCSLVL..................................................................................................................................................................................................................... 97
35 -15.0003h8u_A mol:protein length:125 uncharacterized conserved protein with double-stranded beta-helix domain  ali model follow..  11  5.......................................................................................................NMRAETESRIFSVDEYVRPSNGEPIRSVVLETNDSVVVVWHAHPGQEIASHVHPHGQDTWTV-ISGEAEYHQGNGI--------------------VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVA................................................................................................................................................................................................................ 114
36 -14.9001v70_A mol:protein length:105 probable antibiotics synthesis protein  ali model follow..  24  33..............................................................................................................................................YALLPGQAQKVHVHEGSDKVYYA-LEGEVVVRVGEE---------------------EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTA................................................................................................................................................................................................................ 102
37 -14.9002b8m_A mol:protein length:117 Hypothetical protein MJ0764  ali model follow..  16  18..................................................................................................................................VEKLVNTEHVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQE--------------------PHNYKEGNIVYVPFNVKMLIQNINSDILEF..................................................................................................................................................................................................................... 96
38 -14.7002yu1_A mol:protein length:451 JmjC domain-containing histone demethylation protein 1A  ali model follow..  11  46..........TNKYNANFVTFMEGKDFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSR----RMVDVMDVNTQKGIEMTMAQ------RYYETPEEEREKLYNVISLEFPSTVDFIDWVDNMWPRHLKESQCLMSVRGCYTDFHVDGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIQRIELKQGYTFVIPSGWIHAVYTPTD---TLVFGGNFLHSFNIPMQLKIYNIEDRTRVPN........................................................................................................................................................................................ 322
39 -14.6005j7m_A mol:protein length:123 Cupin 2 conserved barrel domain protein  ali model follow..  10  41..............................................................................................................................................YSVPPGDESPIDQHPELELSIVVA--GTAHVTVGDTVHE---------------------VPHGNAFLLNSLEAHVVQNRSADEVLTVFSA................................................................................................................................................................................................................. 108
40 -14.6006bvr_A mol:protein length:195 3-hydroxyanthranilate 3,4-dioxygenase  ali model follow..  18  8..........................................................................................................EGRHMLTYGAPFNFPRWIDEHAHLLKPPVGNRQDFIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVD-----------------GRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIE.................................................................................................................................................................................................................. 121
41 -14.5003h50_A mol:protein length:114 Tetracenomycin polyketide synthesis protein  ali model follow..  15  25............................................................................................................................................AEMVIAPGDREGGPDNHRGADQWLFVVDGAGEAIVDGH---------------------TQALQAGSLIAIERGQAHEIRNTGDTPLKT---VNFYHPPAYDAQGEPL.................................................................................................................................................................................................. 109
42 -14.5004e2g_A mol:protein length:126 Cupin 2 conserved barrel domain protein  ali model follow..  20  44..............................................................................................................................................NWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGEE---------------------TRVLRPGMAYTIPGGVRHRARTFEDGCLVLDI................................................................................................................................................................................................................... 111
43 -14.5003fjs_A mol:protein length:114 uncharacterized protein with RmlC-like cupin fold  ali model follow..  22  39..............................................................................................................................................MRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGA---------------------QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTV................................................................................................................................................................................................................... 106
44 -14.4003cew_A mol:protein length:125 Uncharacterized cupin protein  ali model follow..  14  1.................................................................................................................MKNYQKMSVAQDARVELHDSLALTGAEVSINHLPAGAGVPFVHSQNEEIYGI-LSGKGFITIDGE---------------------KIELQAGDWLRIAPDGKRQISAASDSPIGF..................................................................................................................................................................................................................... 96
45 -14.4005j4f_A mol:protein length:119 Uncharacterized protein  ali model follow..  13  43..............................................................................................................................................IRICMPKGAVMDKHKAPGAISVQVLEGKIVFEVGDE---------------------KIEMPKGALISLEAQVLHRLDALENSVIRLSLS.................................................................................................................................................................................................................. 111
46 -14.4005fq0_A mol:protein length:114 KDGF  ali model follow..  18  35..............................................................................................................................................VCVKFDRGAVGTPHHERHDQIGYVVQGAFEVELEGE---------------------KRRLSPGDAFVAPHHTMHGAVALEPDSLVIDL................................................................................................................................................................................................................... 103
47 -14.3005j4g_A mol:protein length:107 Uncharacterized protein  ali model follow..  13  29..............................................................................................................................................IRICMPKGAVMDKHKAPGAISVQVLEGKIVFEVGDE---------------------KIEMPKGALISLEAQVLHRLDALENSVIRLSLS.................................................................................................................................................................................................................. 97
48 -14.3003d82_A mol:protein length:102 Cupin 2, conserved barrel domain protein  ali model follow..  16  1...................................................................................................................GMQTKVINFNDKFSLFNQHWSPRVIAEMLVKVEGEFVWHEHADTDEVFIV-MEGTLQIAFRDQ---------------------NITLQAGEMYVIPKGVEHKPMAKEECKIMI..................................................................................................................................................................................................................... 98
49 -14.2006bvp_A mol:protein length:195 3-hydroxyanthranilate 3,4-dioxygenase  ali model follow..  21  49..............................................................................................................................................VTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVD-----------------GRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIE.................................................................................................................................................................................................................. 121
50 -14.1005fpx_A mol:protein length:113 PECTIN DEGRADATION PROTEIN  ali model follow..  14  36..............................................................................................................................................VCVHFDKGAIGVAHHDIHDQIAYVAAGSFEVEIEGQ---------------------KRILKAGDAYRAVKNEMHGAVSLEDNSILIDT................................................................................................................................................................................................................... 104
51 -14.1003jzv_A mol:protein length:166 uncharacterized protein Rru_A2000  ali model follow..  18  57...............................................................................................................................................YFEVGPGGHSTLERHQHAHGVMILKGRGHAMVGRA---------------------VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVN................................................................................................................................................................................................................ 126
52 -14.0001zvf_A mol:protein length:176 3-hydroxyanthranilate 3,4-dioxygenase  ali model follow..  11  1..............................................................................................................AMFNTTPINIDKWLKENEGLLKPPVNNYCGFTVMIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDET-------------DAEPKFIDIIINEGDSYLLPGNVPHSPVRFAD---TVGIVVEQDRPGGENDKIRWYCSHCRQVVHESELQMLD................................................................................................................................................................................. 143
53 -14.0004wzc_A mol:protein length:177 3-hydroxyanthranilate 3,4-dioxygenase  ali model follow..  17  1...........................................................................................................HHHMLTYGAPFNFPRWIDEHAHLLKPPVGNRQDFIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVD-----------------GRRERADLKEGDIFLLPPHVRHSPQRPEAG--SACLVIERQRPAGMLDGFEWYCDACGHLVHRVEVQLKS................................................................................................................................................................................. 144
54 -14.0001o4t_A mol:protein length:133 putative oxalate decarboxylase  ali model follow..  19  36..........................................................................................................................EMAHLLSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYI-LLGEGVFHDNGK---------------------DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAVI................................................................................................................................................................................................................. 124
55 -13.9001vj2_A mol:protein length:126 novel manganese-containing cupin TM1459  ali model follow..  15  43............................................................................................................................................VMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQG---------------------EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIP................................................................................................................................................................................................................ 115
56 -13.9001yhf_A mol:protein length:115 hypothetical protein SPy1581  ali model follow..  13  43..............................................................................................................................................TVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQE---------------------TYRVAEGQTIVMPAGIPHALYAVEAFQMLLVVV.................................................................................................................................................................................................................. 111
57 -13.8005tfz_A mol:protein length:150 dimethylsulfoniopropionate lyase DddK  ali model follow..  14  58...............................................................................................................................................FAEIAPGGDLTLHYHSPAEIYVVTNGKGILNKSGKLET---------------------IKKGDVVYIAGNAEHALKNNGKETLEFYWIFP................................................................................................................................................................................................................ 127
58 -13.8005wsd_A mol:protein length:118 Uncharacterized protein tm1459  ali model follow..  15  41............................................................................................................................................VMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQG---------------------EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIP................................................................................................................................................................................................................ 113
59 -13.8005cu1_A mol:protein length:212 DMSP lyase  ali model follow..  12  1.........................................MSSGSMTQTDPAFQNLLA--EFQALHAREPALAGFVALPDSLTPQPVTPVRIPPAALMESDPDLTTTAYAAIRDAFIAAGAVAYCLIGEGGPFASDSLAAYVVYMPAGLY-YPFHQHPAEEIYFILAGEAEFLMEGHPPR--------------------RLGPGDHVFHPSGHPHATRTYDRPFMALVL................................................................................................................................................................................................................... 188
60 -13.8002oa2_A mol:protein length:148 BH2720 protein  ali model follow..  11  1..............................................................................................GSLHEEADHRVTDHGPRPFVVNIEDETKRNRAFRRALWTGDHLQV-TLMSIQVGEDIGLEIHPHLDQFLRV-EEGRGLVQMGHRQDNLHFQEE---------------VFDDYAILIPAGTWHNVRNTGNRPLKL..................................................................................................................................................................................................................... 118
61 -13.6004mv2_A mol:protein length:128 plu4264  ali model follow..  13  35............................................................................................................................................GGAWCIVRPETKSFRHSHNEYELFIVIQGNAIIRINDE---------------------DFPVTKGDLIIIPLDSEHHVINNNQEDFHF..................................................................................................................................................................................................................... 102
62 -13.6002xl7_A mol:protein length:239 SLL1785 PROTEIN  ali model follow..  11  47.............................................................................................................................................HAQIPPGGGPMPHIHYFINEWFWT-PEGGIELFHSTKQYPNM-DELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWMRNEVAPDFPYHDGGMREYFQAVGPRITDLNNLPELTNAQRAAFASEAPKYGINQSSYFMEYVNTISD............................................................................................................................................. 204
63 -13.6003kgz_A mol:protein length:156 Cupin 2 conserved barrel domain protein  ali model follow..  14  48...............................................................................................................................................YFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGET---------------------ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVN................................................................................................................................................................................................................ 117
64 -13.4003cjx_A mol:protein length:165 Protein of unknown function with a cupin-like fold  ali model follow..  27  46..............................................................................................................................................MRASFAPGLTLPLHFHTGTVHMYTISGCWYYTEYP----------------------GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIF................................................................................................................................................................................................................. 114
65 -13.4003ibm_A mol:protein length:167 Cupin 2, conserved barrel domain protein  ali model follow..  12  40..........................................................................................................................RRQTLVGRPAGQEAPAFETRYFEVEPGGY-TTLERHEHTHVVMVVRGHAEVVLDDRVEP---------------------LTPLDCVYIAPHAWHQIHATGANEPLGFLCI................................................................................................................................................................................................................. 128
66 -13.3002pfw_A mol:protein length:116 Cupin 2, conserved barrel domain protein  ali model follow..  20  37..............................................................................................................................................VKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDGV---------------------IKVLTAGDSFFVPPHVDHGAVCPTG---GILIDTFSPAREDFVEGLS.................................................................................................................................................................................................... 116
67 -13.3004h7l_A mol:protein length:157 uncharacterized protein  ali model follow..  14  48............................................................................................................................................SVHYTQITKAARTHYHREHQEIYVLDHAAHATIELNGQ---------------------SYPLTKLLAISIPPLVRHRIVGE............................................................................................................................................................................................................................ 109
68 -13.3004uxa_A mol:protein length:131 CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN  ali model follow..  14  41.............................................................................................................................................STTFEPGARTAWHTHPLGQTLIVTAGCGWAQ-----------------------EGGAVEEIHPGDVVWFSPGEKHWHGAAPTTAMT-HLAIHERLDGKAVDWMEHVTDEQYRR........................................................................................................................................................................................... 131
69 -13.3002ozj_A mol:protein length:114 Cupin 2, conserved barrel  ali model follow..  17  41..............................................................................................................................................SLFSFADGESVSEEEYFGDTLYLILQGEAVITFDDQ---------------------KIDLVPEDVLMVPAHKIHAIAGKGRFKMLQITL.................................................................................................................................................................................................................. 109
70 -13.3003i7d_A mol:protein length:163 sugar phosphate isomerase  ali model follow..  22  42.........................................................................................................................................QFGVNLVRLEPGAKSSLRHYEQDEFVMV-TEGALVLVDDQG---------------------EHPMVPGDCAAFPAGNGHQFVNRTDAPATF-LVVGTRT............................................................................................................................................................................................................. 122
71 -13.2005uqp_A mol:protein length:125 Cupin  ali model follow..  16  47.......................................................................................................................................VAPFTLAHIRVPGGVTTAEDHHEVREIWLV-QSGSGILTLDGV---------------------RSRVRAGDTLYYESYRRHQLHNDGDSPVEI..................................................................................................................................................................................................................... 118
72 -13.2004rd7_A mol:protein length:127 Cupin 2 conserved barrel domain protein  ali model follow..  21  40..............................................................................................................................................CVVAPGVSSGEHGHHEYEIWIAMT--GRAELVSDGARRP---------------------FHAGDVVYLPPGSRHQVVNPTDEQFQM..................................................................................................................................................................................................................... 103
73 -13.1004b29_A mol:protein length:217 DIMETHYLSULFONIOPROPIONATE LYASE  ali model follow..  9  4SSSGLVPRGSHMASGRAALTHLL-------------------------------------EAARDWHEALPEFRAFATWPEDLRWADRPAHALPVIDHLTRDPGHASDQSQPLRDALVAAAPHVFELAGPSGHFLTQSLRVTVGYWGPGLD-YGWHEHLPEELYSVVSGRALFHLRNAPDL--------------------MLEPGQTRFHPANAPHAMTTLTDPILTLVL................................................................................................................................................................................................................... 197
74 -13.0003ww1_A mol:protein length:256 L-ribose isomerase  ali model follow..  7  5.......................................................TAISRREYDEWLSEAASLARALRYPVTPEMVNDSAGIVFGDDQYEAFAHGLWSEVMVILESLNEPAVDGLPAAGAAHAEYSGLCDKLMIVHPGKFCPPHFHQRKTESYEV-VLGEMEVFYAPE---------------------PVTVGDDDVLSFSPMPEGSPWPEGVALPA...................................................................................................................................................................................................................... 159
75 -12.9003d0j_A mol:protein length:140 Uncharacterized protein CA_C3497  ali model follow..  11  1............................................................................................................SNAMKPDIYENNREGILCVYKNEKWLVC-IKNWKPDNDIEGIAHLEIHHSTDEQFIL-SAGKAILITAEK-------------ENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMYVQDSNCSMDNSDFCDLSKEEIEYIQTNARK....................................................................................................................................................................................... 136
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.