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Query: 2y33_A mol:protein length:252 EGL NINE HOMOLOG 1, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVFLast
1 -105.0002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model  100  1GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
2 -102.0005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  98  1GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
3 -101.0005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  98  1GSHMASPNGQTKPLPALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNCNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERAAAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
4 -98.3002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  99  1...........MALPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 241
5 -97.9002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  100  2......PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKP......... 238
6 -97.3004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  98  1.......GSQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGLRVELNKPSD....... 238
7 -89.5005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  64  3.......SEEALPSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDADERARAKDKQLASGQKGVQVPVSQ......... 239
8 -87.0006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  49  25.DKTGLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVS--VNRIRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYPGSGLGYIRHIDNPNRDGRCVTVLYYLNPNWNSQDCGGQLWLYPNNENKVVKIDPIFDRLLLFWSDRRNPHEVKPAYAMRYAITLWYFDEKERALSSQNGT...................... 251
9 -78.0004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  20  6SGLVPRGSHMASHISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATEVRETIRGDQIQWIDPGQAEA-----CDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRFRDDRRMVSAVLYLNEGWQPHDGGQLRMFLAD--GVEHDVEPVAGCLVVFLSGE-VPHEVLPAGRERLSLTGWFRRRGND.............................. 221
10 -52.1003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  11  37.................KTFQDGLKKEIQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 273
11 -51.9004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  11  34.................KTFQDGLKKEIQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVEEVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 270
12 -51.4003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  11  3..EEDKIKGMFNPKIWDKTFQDGLKKEIQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 254
13 -50.6004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  18  59..............RRTPFSHEVIVMDMDPFLHCVIPNFIQSQFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKK--------------RREPHISTLRKILFEDFRSWLSDISKIDL-ESTIDMSCAKYEFTDALLCHDDEL--EGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQVKSLIPSWNKLVFFEVSPVSFHEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHE......... 278
14 -33.5005iqs_A mol:protein length:315 WelO5  ali model follow..  13  34..........DINATEVKKYPTAIQDIIRSFDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIYGHAIVYFASSAIFRQACRTMFQGSPDFEEQVESIFHSLS-GQTYTPATIRLLLEGREIAVHVGNDFLLSDQLSYFIPLT---VPEAGGELVVYSLENQSQSVAYAPGPGDMLLFNGGR-YYHRVSEVNSPRRTIGGFLAFSKQRD............................. 302
15 -32.3003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  9  16.............ARAEHMTIAAAIHALDDEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRTTRFVRLFSDALDAKPLTIGHDYEVEFLLATRRVEAPFNFAPHCDDVSYGPRQLGGFLTIQ---GADNDAGMVMWDNRPESAKIMLKPQPGQLTLFQSK--NLHAIERCTSTRRTMGLFL.................................... 262
16 -32.0003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  9  4.....................DKIENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPP------------LFNRYQGGETFGYHIDNDGMIRTDLSATLFLSEP-ENYQGGELVIQDTYGQ---QSIKLSAGSLVLYPSS--SLHQVTPVLSERTAAFMWLQSMVRDEGQRRIQSLTAQTAAEQELFNLSGVYHNLL 231
17 -31.6005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  17  33.................................EKIDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGEHE------VIDKIQKKTREFLNSKKHCIDKYNFEDVQVARYKPGQYYYHHYDGDDCDQRLATLMVYLK---APEEGGGGETDFPTLK---TKIKPKKGTSIFFWVYKETLHAGLPVKSEKIIANQWIRAVK................................ 222
18 -25.7002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  17  16........................VVHLSWSPRAFLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDS---EIRTSTGTWFAKGE--DSVISKIEKRVAQVT----------IPLENHEGLQVLHYHDGQKYEPHYDYFHDPQRVVTMLMYLT---TVEEGGETVL--SECAKRGLAVKPIKGDALMFYSDPASLHGSCPTLKDKWSATKWIHVAP................................ 222
19 -25.6005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  15  33........................IISKFEEPLIVVGNVLSDEECDELIELSKSKLARSKV-------GSSRDVNDIRTSSGAFLDDNELTAKIEKRISSIMN-------------VPASHGEGLHILNYEVDQQYKAHYDYFAEHNRISTLVMYLN---DVEEGGETFF-----PKLNLSVHPRKGMAVYFEYNELTLHGGAPVTKEKWIATQWVRRGT................................ 215
20 -25.4006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  8  40.............LSHLQNFKDFDYTEICND--VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQL------YEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDINLAFVVKYERQSELAPHHDS--STYTLNIALNEYGKEYT---AGGCEF----IRHKFIWQGQKVGYATIHAGKLLAYHRALPITSKRYILVSFV.................................... 228
21 -22.9004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  9  1GPEFTVDSKPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIP-------PPKGERLLADKYPPHFKYVPNVATTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAQPFHRDDAEAPPVSLSVIFPLTE---TEENGATEVIGTPERDQAVLATMDPGDVLIVRQR--VVHNRTTAGKPRRVVLAYFNSV--------TPFETYRTMPREMVESMTVLGQRML 258
22 -22.8005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  9  1GPTITETSKPTLRRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQW--------ELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMNDELLHGLCKRLFGPESGDYWLTTSSVLETEPGY-QELHREHRQSPESMLNFLTALT-DFTAENGATRVL-PPPKADTAIPAVMNPGDAVLFTGK--TLHG-NTTDFLRRGFPLIMQSC--------TPVEASVALPRELVETMTPLAQKMV 259
23 -22.1005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  9  2.MTSKDHVKSQIPRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLST-TTRLVNVLAPISKAYREDVLNSKVLHRICSDAFHVYGDYWVLMGAV---MELAPSNPAQPLHRDMPDAPATSINFLVALS-PFTAENGATHVI-SNVSMDATVRALMNPGDALLITDS--TIHC-TTGTETRRLLTITMGIS--------TPLESNLAVPRPVIESLTPLAQRLL 261
24 -21.8004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  10  8..TSQHQEHTGTKRFSIQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPLKADR-FKADKKDDPHFWLADFIPDHVARVHNLVDFSHCFRHEILNHELLHKICRLTFEESGDYWLGYGAVIENGPGTTEQKWHRDQPDAPEGMLNFFTALTD---DAETGKTQYIEPDADHPIEYVGLKPGDTTIVSGK--ITHRGSDSDKMRRAMPIMIIPS--------TPFDATCHLSRELVETMTPLAQKMI 271
25 -21.8003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  11  15...................................LSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYAS-----LTDLPWRFPIFADLVKSLDAHVAAFAEDLDLDGRALELEDLWINILPEGGSHASHI----HPHSVISGTTYVS---MPGGTSALKLEDPRHLRQFIYVTPAVGDVLLWES--WLRHEVPMSEDDRISVS....................................... 198
26 -21.6002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  10  19...................................LSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYAS-----LTDLPWRFPIFADLVKSLDAHVAAFAEDLEF--KALRLEDIWINILPEGGVHGSHI----HPHSVISGTTYVA---MPEGTSALKLEDPRLPRTFRSVAPKVGDVLLWES--WLRHEVPMAEEDRISVS....................................... 202
27 -21.5005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  9  9..VPRGSHMPPIRRVNASQGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNLPFAHEVLEKVFKKDSGDYWLNMGN---ILNMLPGAEAQRPHRDDATSPDLMINITFPLN-EFRHDNGGTLLL-FYANAEDLPAAEMQVGDALIF--TGKCVHGGGASDKPRIGLALAAQPG--------TPRESNVNVPRDIVETMTPLAQRMI 268
28 -21.3004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  11  1.............MTTATLDRAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLHREELAQLAAAFVDG--VVPTAYALVLKEPYRAAEVPWHRDRVNGPRTVCNLSICLDD--AGPHNGCLEAVPGSATGPVVPVPVSQGDVVVH--DVRLVHGSGPNGSWRRTIVIEYADPAAP.............................. 220
29 -21.3005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  10  12....GSHMPSRLQKFPATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKR------FSKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGMGYHFNDTMVIEVQPGAPAQRLHRDQPDAPECLVNFFCAVTP---TVENGATRLVPQYGKIDSVPAIMQPGDCYMMSGK--VIHG-ATLSDQRRALAFST------RRELRPVQAFPLWIPMQIATELSPRTQAMF 274
30 -20.8002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  12  1GSHMTNVTGDYTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMRELVALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIGPNQDFRTFWIPLIRTTRESGGVALADGSHREHLLHSPMEPGDILLF--HAHMCHKSIPNLSKRMSMDTRVQPAKSH.............................. 256
31 -20.8005ybm_A mol:protein length:314 PrhA  ali model follow..  11  9.VPRGSHMPPRLQRFPATASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEKIP------VEVTNNGNSNDRTKRFSKCVIASPTFRNEIIESDLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPAQRLHRDQEAGPECVINFFCAVTP---TEENGATRLVPGSGKIETVPAIMQPGDCYLMSGK--VIHG-ATTTDRRRALALAI------RRELRPMQAFSLSVPMKLAREMSERSQTMF 274
32 -20.5003nnf_A mol:protein length:344 CurA  ali model follow..  11  4GVDLGTENLYFQSNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNAL---------FSVEPNHKGLPWHVGVGKTEDFGASIWIPLDK--TKEHRGGMQYVTIKDGYEEDEYNL--GDAFFF--NKYVLHQSVPLHKLRRAFVIRLVDYDTR.............................. 272
33 -20.4004xab_A mol:protein length:252 EvdO2  ali model follow..  9  1..........MDAMEVVGTIDHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKYVPELLDSPHFARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHQDEARWRRRGLSIWTTLDE--ATVESGCLHYLPGGHRTSAVACPLAPGGAVVH--DFRTPHYAGPTDQPRRAYVLVFMSAPAEVADPEPRPWMDWG................. 252
34 -19.9004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  9  1.............LHMVPALTREQLYIFDTTGFLVIPGVFGSGEVESFRSELERLDTV----DPGFPRTRRYPDLPAASPVFARLALDDRLLAPVRDVVN--QPLRLLEGYGLRRTKDSVLYLHGGNSELLDLGDRQVGRDLSI-YCPYVKALVYLSDIQSPEDGSFCYV-VDSGFPTLSDVFVRSGDVLLL--NEALMHGTRRTEGDRLLTAFGYGPTFFTEWRELDAETADLRGAGY--VDHDVEEDFVL 261
35 -18.7004xbz_A mol:protein length:334 EvdO1  ali model follow..  16  20.GDLRVVNRIAECDIRRTGLLPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAW-STRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAG--HPLLLRIMEQLVGPNLIPTWDSMVFKTPAGAPRLAWHRDAGLGAGRVIDAGIYLDP---APEDNCVWCIPESNYTGAVPAVMQPGDLLLH--NILTLHGAPAVGKQRRVIYFEYRPAEVEWQLGPHSAEYIGLKQ............... 276
36 -18.5004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  10  101...........................CDHDGSVELPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLYPSTAFNSLKPSNDGHRIRKPHKDN---LDITPSSLFYFGN---QNTEGYLEL---TDKNCKVFVQP--GDVLFFKGNEYK-HVVANITSWRIGLVYFAHKGSKTKPYYEDTQKNSLKIHKETK........... 321
37 -18.4002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  13  5.SSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQRPSDLIVCAWTAMEH--ISRNNGCLVVLPGTHKKARVHLVMEKGDTVFF--HPLLIHGSGQTQGFRKAISCHFASAD................................ 256
38 -18.2004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  10  27...........SEWTNDAPISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQSNEIRSIFEIHAQSPVMARLAADARLADVARFLL-----------VYIHQSRLNYKPGFKGREFYWHSDFETPRMRALSMSVLLAE--NTPHNGPLMVIPGSHRHGIVAPTGKPGTVILF--DCNLMHGSNGTPFPRANAFLVYNAVSN............................... 270
39 -18.2005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  12  6DQETEPGVPADLPAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTYVADAQLGSDTMRRLATHPRIAALAEYLAGS------------PLRLFKLEVLLKENKEKDASVPTAPHHDAFSTAGTALTAWVALVD---PVERGCMTFVPGEIWMPRVTVPLRAGDCTFH--HARTVHSAGATDEPRLSTSAVYMDAT................................ 240
40 -17.6003emr_A mol:protein length:310 EctD  ali model follow..  9  25.........TDRSKDNQAPITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLL-----------VYVHQSRINYKPGFKGKEFDWHSDFETPRMRAISVSIALSD--NYSFNGPLMLIPGSHNGGISVPTGKAGSVTLF--ESNTMHGSTSTPYPRNNLFMVYNSVKN............................... 271
41 -17.3005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  10  5..................QLTADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQEV----------QGPHRILEEDGRTVRALYASHTRQSVFDQLSR--SDRLLGPATQLLECDLYIHQFKINTKRAFGGDSWAWHQDFIVPAPRAVNVGVFLSD--VTEFNGPVVFLSGSEKHPMVSPKAASGSVMLF--HPEIIHGSAPSPFARDLLIITYNDVANAPKPAGEPRPEY................... 248
42 -17.2005epa_A mol:protein length:279 SnoK  ali model follow..  10  1..MARSADPDPGGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEK---------EGREIWGAGEDEVQVHYVAQAWQKHPELRSLV--LHPEISGIALRLAGAPLRVYSSDILVKEPKRTLPTLVHDDETNELSATLTAWIALTD--VPVERGCMSYVPGSPWQPRVAVPVRAGDVVFH--HCRTVHMAEASDSVRMAHGVVYMDADAT.............................. 239
43 -16.8002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  15  1................MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAESTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSIVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASEPLGRVLGVWIAVED--ATLENGCLWFIPGSHTSLFVPTPVQRGALVLI--HGEVVHKSKQSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQ............ 288
44 -15.9006EC3 Entity 1(prereleased)  ali follow..  11  246.................RARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISR-FTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLF--RPELAELAAAFVGSPVVPTAFALVLKEPKRAAGVPWHRDRANAPHTVCNLSICLDT--AGPENGCLEGVEIRDGGPRVPVPSKVGDVIVH--DVRLVHGSGPSDQWRRTIVIEFANPA................................ 457
45 -15.8002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  11  1GSHMSKKFALT----------AEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLD----RSAAAYQDLDAISGGTNIANYDRHLDDDFLASHICRPEICDRVESILGPNV---------RTEFFPKYPGDEGTDWHQADTEEFGGTITVWTAFTD--ANIANGCLQFIPGTDEASAVPMQMKAGQFIIF--WSTLMHHSGESQEMRMGFASRYVPSF................................ 262
46 -14.9004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  11.NLYFQSMPERSDYEEQQLQKEEEARKVK--SGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEH-----RVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD-HCIRPIKERRAVII....................................... 233
47 -14.8004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  7..............ERRDAEARRVKSGI------KQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAAD-HCIRPIKERRAVIILRKTRADAPRLDSNSLSPSIVSPKRRHILKAKRSHRK.. 249
48 -14.8004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  8  15.............................QDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSR-------SEASMAIMRRVQAAAFGPGQTLLSSV------------HVLDLEARGYIKPHVDSIKFCGATIAGLSLLSP---------MRLVHTQEPGEWLELLLEPGSLYILRGSARY-HEILRDEESRISVI....................................... 186
49 -14.2003gja_A mol:protein length:319 CytC3  ali model follow..  10  2.........TTVSEQANFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEF-------------FPKYQGDEGTDWHQAATPAFIGTITVWTAFTH--STEQNGCLQLMPGTDESQAYPMVLKPGEAVIF--WSNTMHASLPHTGSRMGFAARYVPTQ................................ 264
50 -14.2002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  12  1........................MQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAG--YPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 198
51 -13.9003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  12  21...............................GAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTN-RQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAG--YPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 211
52 -13.8004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  8  17.................................IRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYGPGQERLYPPGDVDEIPEWVHQLVIQKLVEH-----RVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD-HCIRPIKERRAVII....................................... 209
53 -13.5004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  12  1.........................QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTN-RQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAG--YPDFQPDACLINRYAPGAKLCLHQDKIHPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 197
54 -12.7006fxk_A mol:protein length:718 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3  ali model follow..  12  543.................................VYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFPGYHT----KARAVMNFVVRYRPDEQPSLRPHHD-----SSTFTLNVALNHKGLDYEGGGCRF----LRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWTRYIMVSFVDPAA................................ 717
55 -12.7003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  13  112...............................GLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHENNNVDKDKPLSGGLPDICESF------LEKWLRKGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSL---------SLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRY-HGITCRKFDRTSFT....................................... 308
56 -12.0003pl0_A mol:protein length:254 Uncharacterized protein  ali model follow..  12  8................LPLGRATALQRLRAQGFCVLTP-MPLDAFDMMLPYWEELAPDLHLKDGGHYRYRRHGCFMQTLQWFEPLSNEMIHLPSWSALLVALGELFAKLRAPQGGRWYIEAHPFRIDTEGGVGR---AHRD-----GVDFVAVVFIGRQ----RGGETRVFDAAGPQGVRFTLEQPWTVLLL-DDQQVIHESTPLLPLRDTLVLTYRSGGFQAPA........................... 254
57 -11.4005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  9  12...............................GMVLLKKFLKHDDQVDIIRRCQKLGIGSSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKARPLPPLSPDICLVNFYTSSGKLGLHQDKDETKPSL-LPVVSFS--------GDTAEFDVNDVDKASKVDLESGDVLIFGKSRLIFHGVSRIRPGRLNLT....................................... 227
58 -11.3003on7_A mol:protein length:280 Oxidoreductase, iron/ascorbate family  ali model follow..  12  10...............RAADSAKRFVESLRETGFGVLSN-IDKELVERIYTEWQAFFNSEAKNEFMFNRETHDGFFPASISETAWGRIPDSLRANILAYYEKANTLASELLEWIEEMIANSHKTLLRILHYPP---AAAHEDIN-----LITVLP------TANEPG-LQVKAKDGS---LDVPSDFGNIIINIGDPSTSHRVIDKTKSRISLPLFLHPHPS............................... 257
59 -10.5005gj9_A mol:protein length:303 1-aminocyclopropane-1-carboxylate oxidase 2  ali model follow..  10  21.................DQTMALINEACENWGFFIVNHGLPHDLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVEDVISDVSDEYRTAMKDFGKRLENLAEDLLDLLCENL-KGPTFGTKVSNYPP---LRAHTDAGG-----IILLF------QDDKVSGLQLLKDGD----IDVPPLNHSIVINLGDKSVLHRVVTQEGNRMSVASFY.................................... 254
60 -10.2005lun_A mol:protein length:352 2-oxoglutarate-dependent ethylene/succinate-forming enzyme  ali model follow..  12  1GTNTNLQTFELPTEVTGCAADISLGRALQKDGIFQIKT-EQDRKTQEAMAASKQFCKEPLTFKSSCVSDLTYSGYVASGEEVTAGKPDFPEIKSMKTFMEELGLAGERLLKLTALGFTRDGWHHMRVLRFPPQT-IGAHTDY------LLVIAA------QDDVGG-LYIRPPVEGEKRTFVTPTPGVWTVFPGDLSTPHKVKLNTRERFACAYFH.................................... 286
61 -10.0001w9y_A mol:protein length:319 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 1  ali model follow..  9  18.................AATMEMIKDACENWGFFLVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENL-KGPNFGTKVSNYPP---LRAHTDAGG-----IILLF------QDDKVSGLQLLKDGQ----IDVPPMRHSIVVNLGDKSVMHRVIAKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYM. 286
62 -9.7701w28_A mol:protein length:331 DEACETOXYCEPHALOSPORIN C SYNTHASE  ali model follow..  12  30.................GLHQDEFRRCLRDKGLFYLTD-LTDTELKSAKDLVIDFSPVPTMRRGFTGLESESTAQITNTGSYSDYSMSGDFERIWTQYFDRQYTASRAVAREVLRATFLDCEPLLRFRYFPQ---MAPHYDLS-----MVTLIQ------QTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAKAPRHHVAAAGSSRTSSVFFLRPNAD............................... 284
63 -9.5105lsq_A mol:protein length:359 Ethylene Forming Enzyme  ali model follow..  12  2NHKVNLQTFELPTEVTGCAADISLGRALQKDGIFQIKT-EQDRKTQEAMAASKQFCKEPLTFKSSCVSDLTYSGYVASGEEVTAGKPDFPEIKSMKTFMEELGLAGERLLKLTALGFTRDGWHHMRVLRFPPQT-IGAHTDY------LLVIAA------QDDVGG-LYIRPPVEGEK-TFVTPTPGVWTVFPGDLSTPHKVKLNTRERFACAYFH.................................... 287
64 -9.4203oox_A mol:protein length:312 putative 2OG-Fe(II) oxygenase family protein  ali model follow..  14  20.................TRFAQELGASFERYGFAVLSD-LDQARIDAAVDSAKAYAGVKGGARGYIPFGVETAKGADHYD--VWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLVQDGNSVLRLLHYPPGVRAGAHGDIN-----TITLLL-------GAEEGGLEVLDRDGQ---LPINPPPGCLVINIGDPSTVHRVVRRGVPRYSTPFFLHFASD............................... 274
65 -9.4005apa_A mol:protein length:220 ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE  ali model follow..  11  23........................VNGLKAQPWWTPKETGYTELVKSLERNWKLIRDEGLAVMDKAKGLFLPEDENLREKSQFTLWQQGRRNENACKGAPKTCTLLEKFPE-----TTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANETKTWEE-------------GKVLIF--DDSFEHEV-DASSFRLIFIVDVWHPELTPQQRR......................... 209
66 -9.4002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  13  4SSSGLVPRGSHMRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQ--KQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTFNSLL--------CNLYRNEDSVDWHSDDEPSLGRC-PIIASLS--------GATRTFGDYTYVERVKIPLDHGTLLIMATQADWQHRVPKEYHPRVNLT-W..................................... 232
67 -9.3904p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  10  25............................................QRRLTDDLAVLAKSNFSSEYSDFACGRWEFCMLRNQS---QEEQRVVVHETPALATPLGQSLPYLNELLDNHFDRDSIRYARIIRISENACIIPHRDYLELEGKRVHLVLDTNEKCSNTEENNIFHMGR-------------GEIWFL--DASLPHSAGFSPTPRLHLVVDIEGTRSLEEVAINVEQPSARNATVDTRKE........ 211
68 -9.2801bk0_A mol:protein length:331 ISOPENICILLIN N SYNTHASE  ali model follow..  12  19..........GDDQAAKMRVAQQIDAASRDTGFFYAVN-INVQRLSQKTKEFKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPQDFAEQYYWDVFGLSSALLKGYAALGKEENFFARHFKPDDTLASVVWHEDVS-----LITVLY------QSNVQN-LQVETAAG----QDIEADDTGYLINCGSKAPIHRVKWVNAERQSLPFFV.................................... 286
69 -9.1304xae_A mol:protein length:373 Feruloyl CoA ortho-hydroxylase 1  ali model follow..  11  79.................DRVAEAVCDAAEKWGFFVINHGVPLEVLDDVKAATHKFFNLPVEEKRKFTKENSLSTSPLAEQALEWKDYPDICRNETLEYINKSKKMVRRLLEYLGKNLLFMGSIRVNLNYYPI---VGRHSDVSS-----LTILL------QDQIGG-LHVRSLASGN--VHVPPVAGSFVINIGDKSVEHRVLAGYNNRISVPIFVNPKPE............................... 321
70 -9.1001e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  6  1...................................MRSHILGKIQTRLAPDLAYLAAVPTVEEEYDEFSNGFWKHVPLWNASGDSEDRLYRDLKDAAAQPTAHVEHVPYLKEIVTTVFDGTHLQMARSRNLKNAIVIPHRDFEVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-------------GEIWFL--DAATVHSAVFSEISRQSLCVDFAFDGPFDEKEIFADATLYAPGSTPDLPERRPFTA.. 209
71 -9.0001gp4_A mol:protein length:356 ANTHOCYANIDIN SYNTHASE  ali model follow..  9  57..........SDDEKIRENCIEELKKASLDWGVMLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLLEELLLQMKINYYPK---VEAHTDVSA-----LTFIL------HNMVPG-LQLFYEGK----VTAKCVPDSIVMHIGDKSILHRLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESP............... 326
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.