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Query: 3adr_A mol:protein length:261 Putative uncharacterized protein ST1585, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPCRGLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSIADFSFLDKLDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLVDDFLFTGDSAGAYFNGVVIPTTPPVIDYKMYMESLKRQIELKPKVVGFAHGGLVSPKIMEEHLKQMLSKEEIQINVDIGGVAGEILRKQIEVNLRGLRESKKSILast
1 -97.2003adr_A mol:protein length:261 Putative uncharacterized protein ST1585  ali model  100  1MPCRGLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSIADFSFLDKLDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLVDDFLFTGDSAGAYFNGVVIPTTPPVIDYKMYMESLKRQIELKPKVVGFAHGGLVSPKIMEEHLKQMLSKEEIQINVDIGGVAGEILRKQIEVNLRGLRESKKSI 261
2 -59.7002q0j_A mol:protein length:321 Quinolone signal response protein  ali model follow..  20  10..PRGSHMLRLSAPGGDVQVPVFLLRGEASWALVEGGISRDAELVWAPSQVHYWLITHKHYDHCGLLPYLCPRLNVQVLASERTCQAWKSESAVRVVERLNRQLL--RAEQRLPEACAWDALPVRAVADGEWLELGPHRLQVIEAHGHSDDHVVFYDVRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQS.. 287
3 -54.9006e0s_A mol:protein length:286 MEM-A1  ali model follow..  17  27.PQEPFAVFGSTYYVGVRGLSAVLIASPQGHILIDGGSPESAPQIAQLEDVKLILNSHEHFDHAGGISELQRLSGATVLASVQGEKVLRSGQPSKG------------DPQYGELPPMTPVANTRAVADGEVVKLGPLAVTARYTPGHTQGGVSWTWRAAMVYADSLNAFAAKRYSGSPAYPNALADIKKSIATVAALDCDILISAHPDAGD--LWRRQARQAELGSAAFIDRQACRQYAERAGVRLQKKLAAEAAEK... 286
4 -54.7001jt1_A mol:protein length:263 FEZ-1, class B3 metallo-beta-lactamase  ali model follow..  13  14..AGNLYYV------GTDDLASYLIVTPRGNILINSDLEANVPMIKAFSDTKILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGGKSDFHYANDSSTYFT------------QSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKQAVIIGS-IGVNPGYKLVDNITYPKIAEDYKHSIKVLESMRCDIFLGSHAGMFDLKNKYVLLSKCKNYIEQKANDFYTELKKQETG................. 263
5 -54.6003vpe_A mol:protein length:262 Metallo-beta-lactamase  ali model follow..  16  15..YGNTHYV------GTGGISAVLLSSPQGHILVDGTTEKGAQVVAALSDVKYILSTHSHEDHAGGISAMQKLTGATVLAGAANVDTLRTGVSPKS------------DPQFGSLSNFPGSAKVRAVADGELVKLGPLAVKAHATPGHTEGGITWTWQEQGKCKDVVFADSLTAVSADSYRFSDVASLRGSFEAVEKLSCDIAIAAHPEVND--MWTRQQRAAKEGNSAYVDNGACRAIAAAGRKRLETRLASEKR..... 262
6 -54.5004ad9_A mol:protein length:289 BETA-LACTAMASE-LIKE PROTEIN 2  ali model follow..  16  13..SNRVVRVLGCNPGPMTLTNTYLVGTGPRRILIDTGEPAIPEYISCLKQIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIG----------------------NGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLEENAIFSGDCILGEGTTVFE-------DLYDYMNSLKELLKIKADIIYPGHGPVIHNAKIQQYISHRNIREQQILTLFRENFEKSFTVMELVKII.......... 246
7 -54.5002xf4_A mol:protein length:210 HYDROXYACYLGLUTATHIONE HYDROLASE  ali model follow..  20  3.....YRIIPVTAFS----QNCSLIWCEQLAALVDPGGDAEKIKQEVDATLMQILLTHGHLDHVGAASELAQHYGVPVIGPEKEDEFWLQGLPAQS--------------RMFGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFQSQLLISGDVI---FKGGVGRSDFPRGDHTQLIDAIRKLLPLGDDVFIPGHGPLSTLGYERLH.......................................... 204
8 -54.3005aeb_A mol:protein length:272 LRA-12  ali model follow..  13  20.PYRPFRIAGNLYYIGTYDLACYLITTKQGNIIVNTGLAASALQIKNLTDTKILLTTQAHYDHLGAMAEIKKITGAKLMADEGDATVMADGGSSDYAFGGHGSMFE-------------PIIADRLLHDKDTIQLGDTKLVMLHHPGHTKGSCSFLFDRILIANMP-TIVIEKKFSEVSSYPGIAKDYAYTLQAMKNLSFDIWVASHASQFSMHSKHKPGD........................................ 241
9 -54.1002zo4_A mol:protein length:317 Metallo-beta-lactamase family protein  ali model follow..  18  5..LPGLYLLPVPIPYPLKTVNLYLLQGAGEVALVDTALGTRAARGACFQDVKTILLTHHHPDHYGLSGFFEG-LGARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIPPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAAFYLEGVLLAGDALLEKVSPNVGLWAYTRENLKDFLRSLDRLADLGARVAYAGHFGPIADQRAEELKAHHQARLEALLALLDGPKTAWELSLHLFPQELDPAGRRFAF 289
10 -53.9002zwr_A mol:protein length:207 Metallo-beta-lactamase superfamily protein  ali model follow..  23  3.....VFPVTLGPLQ----ENAYLVETGEGPVLIDPGDEPEKLLALFQTIPLAILLTHAHFDHVGAVAPLVEALDLPVYLHPLDLPLYEGADLAARA---------------WGLAIPKPPLPVRPLEEGMRL----FGFQVLHLPGHSPGHVAFYEGAQVFSGDLL---FRGSVGRYDLPGADPKALFASLKRLLSLPPETVHPGHGPGTTLGLEART.......................................... 196
11 -53.4005evb_A mol:protein length:271 Metallo-beta-lactamase L1  ali model follow..  14  29..ADHTWQI------GTEDLTALLVQTPDGAVLLDGGMPQMASHLLDPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDDLHFGDGITY--------------PPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTRNGKPVRIALSAPGYQLQGNPRYPHLIEDYRRSFATVRALPCDVLLTPHPGASNWDYAAGARAGAKALTCKAYADAAEQKFDGQLAKE............... 266
12 -53.3005iqk_A mol:protein length:271 beta-lactamase Rm3  ali model follow..  15  20..FGNTYYV------GMKGLSSVLVTSPQGHVLIDGGLPESAPKIIAIEDVKLILNSHGHIDHAGGLAELQRRSNALVAASPSAALDLASGEV------------GPDDPQYHALPKYPPVKDMRLARDGGQFNVGPVYLTAHATPGHTPGGLSWTWQNMVYADSINAVSRPGKFSASSEYPNALADLRHSFETLEKLPCDVLISAHPEASQLW------QRLEASATGGSDAFVDPQACRAYVAAARTLLDSRLDQEKQ. 270
13 -53.3005k0w_A mol:protein length:290 Class B carbapenemase GOB-18  ali model follow..  12  41..AGNLYYV------GTYDLASYLIVTDKGNILINTGTAESFPIIKAYKDIKILLLTQAHYDHTGALQDFKTETAAKFYVDKADVDVLRTGGKSDYEMGKYGVTFK-------------PVTPDKTLKDQDKIKLGNITLTLLHHPGHTKGSCSFIFERVLIANMP-SVIVDKKFSEVTAYPNIQSDYAYTFGVMKKLDFDIWVASHASQFD------LHEKRKEGDPYNPQLFMDKQSYFQNLNDLEKSYLNKIKKDSQ. 288
14 -53.3004p62_A mol:protein length:295 Metallo-beta-lactamase AIM-1  ali model follow..  13  47..YGNTWYV------GTCGISALLVTSDAGHILVDAATPQAGPQILAPEDVRAIVLSHEHFDHAGSLAELQKATGAPVYARAPAIDTLKRGLP------------DRTDPQFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRRQMVYADSLTAISDDVYSDDAAHPGYLAAFRNTLARVAALDCDILVTPHPSAMDTTACRRYAQGARQRLEKRLAEEAAA........................ 295
15 -51.9003lvz_A mol:protein length:294 Blr6230 protein  ali model follow..  14  44..IDNIYYV------GTDGIAVYVIKTSQGLILMDTAMPQSTGMIKDVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGGYYPGDEKNEDLAF--------------PAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTEVLFFCSG-TVALNRLVGQPTYAG-IVDDYRATFAKAKAMKIDVLLGPHPEVIKPGELVTYATSLSEDFDKQLAKQTAALEKK.................... 294
16 -51.6004awy_B mol:protein length:303 METALLO-BETA-LACTAMASE AIM-1  ali model follow..  12  47..YGNTWYV------GTCGISALLVTSDAGHILVDAATPQAGPQILAPEDVRAIVFSHEHFDHAGSLAELQKATGAPVYARAPAIDTLKRGLP------------DRTDPQFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRRQMVYADSLTAISDDRYSDDAAHPGYLAAFRNTLARVAALDCDILVTPHPSASGWNRIGPRAAAPLMDTTACRRYAQGA--RQRLEKRLAEEAATSPSSGAR. 302
17 -50.3006auf_B mol:protein length:300 Beta-lactamase-like protein  ali model follow..  15  37.PAPPAHIYGNTWYVGTCGIASILVTSDDGHVLIDSGPADAAPLVLAPADVRWILTSHEHHDHAGSIAELQKATGAQIAAVASARQVLESGKPSAD------------DPQSGLIEGFPPVHVARVLVDGDSVTLGRLALTVRETPAHSPGSASWTWQDEAFTCRMIATTISADDYRFSDHPDRIARIRTGLSRIAQLPCDILVTPHPSAVNAQACAAYSQAAGSYFAKRLAEEAGEAAQE.................... 292
18 -48.9005u8o_A mol:protein length:367 Zn-dependent hydrolase  ali model follow..  13  28..APGVRWLRMPLPFSLDHINLWLLRDEAGWTVVDCGIASDAIRTHDGLPVLRVIVTHCHPDHFGLANWLCEGGDKRRWNVRLWMTLGEYMFGCLMAAGNGSNAGGAAAADHFSDLVPAVPPRYRRLRDGDAVTIGTRTWRVVTGYGHSPEHCALHSEGVLISGDMVLPRISTNVSDLEPEANPLALYLQSLGRYETMAPDLVLPSHGKPFRGTRIAQLRAHHDARLDEVRVACAEQMSAADIVPIM.............. 314
19 -48.7006ao1_A mol:protein length:364 Beta-lactamase domain protein  ali model follow..  13  28..APGVYWLRMPLPFALDHINLWLLRDEKGWTIVDCGIASGEIKANWETPVLRVIVTHCHPDHLGLANWLCEGGDKKRWNVRLWITLGEYMLGRVMAAGDGSNAGGEGAARHFADLVPAVPGQYRRLRDGDALSIGARTWRVVTGFGHSPEHCALHAEGVLISGDMVLPRISTNVSDIEPEGNPLALYLESLGRYETMAADLVLPSHGKPFRGTRIGQLRDHHAARLAEVRAACADKCSAADIVPIMFRRALDIHQMTFAM 328
20 -48.5005i0p_A mol:protein length:366 Beta-lactamase domain protein  ali model follow..  14  28..APGVRWLRMPLPFSLDHINLWLLRDEAGWTIVDCGISSEAIRTHDGLPVLRVLVTHCHPDHFGLANWLCEGGDQGRWNVRLWMTLGEYMFGCLMAAGNGSNAGGAAAADHFSDLVPAVPPRYRRLREGDAVKIGARTWRVVTGYGHSPEHCALHSEGVLISGDMVLPRISTNVSDLEPEANPLALYLESLGRYETMAPDLVLPSHGKPFRGTRIAQLRAHHDARLEEVRVACAEKMSAAGIVPIM.............. 314
21 -45.7004chl_A mol:protein length:238 PERSULFIDE DIOXYGENASE ETHE1, MITOCHONDRIAL  ali model follow..  17  19...................TFTYLLGDRREAVLIDPVLETAPRDAQLIKELLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLS----------------------------------GAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDMAFTGDAL---LIRGCGRTDFQQGCAKTLYHSVEKIFTLPGDCIYPAHDTVSTVEEERTLNPRLTLSCEEFVKIMGN......................... 212
22 -45.6004ysb_A mol:protein length:233 Metallo-beta-lactamase family protein  ali model follow..  22  13...................TYTYLIGDERQAVLIDPVLEQVDRDLQMVAELTHVFDTHVHADHITASGALRERTQATVVGSVNGASCA-----------------------------------NVQVRHGDEVRVGQLVFQVLATPGHTDDSISYLLGDRVFTGDAL---LVRGNGRTDFQNGNASQLYDSLRVLFTLPDETVYPGHD..................................................... 171
23 -44.4004ysk_A mol:protein length:294 Beta-lactamase domain protein  ali model follow..  14  19...................TISYLVMDREQCALIDSVLDYDPKSGRTCSSVRWVLETHVHADHLSAAAYLKEKLGGHTAIGAHITQVQKVFGALFNAEPGFARD---------------GSQFDVLLEDEEGFRIGNLQARALHTPGHTPACMSFMIEDAVFVGDTLFMPDYG-TARCDFPGADARTLYRSIRRLLAFPDQTLFMCHD--YLPGGRDMQYVTTVAEQRASNIHIHQGIDEDSFVAMREAR........... 253
24 -43.8004efz_A mol:protein length:298 Metallo-beta-lactamase family protein  ali model follow..  14  17...................TISYLLFDSGECALIDSVLDYDPKSGRTRTRVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHD---------------GSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAAFVGDTLFMPDYG-TARCDFPGGDARSLYRSIRKVLSLPPATLYMCHD--YQPNGRAIQYASTVADELRENVHIREGVTEDDFVAMRTAR........... 257
25 -43.5002gcu_A mol:protein length:245 Putative hydroxyacylglutathione hydrolase 3  ali model follow..  16  15...................TFTYLLHPDKPALLIDPVDKTVDRDLKLIDELIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKAS----------------------------------GSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEMAFTGDAV---LIRGCGRTDFQEGSSDQLYESVSQIFTLPKDTIYPAHDEVSTVGEEMQHNPRLTKDKETFKTIMSNL........................ 217
26 -42.8002p97_A mol:protein length:201 Hypothetical protein  ali model follow..  15  5LHRPDLYSWSTFNPARNIDFNGFAWIRPEGNILIDPVSNHDWKHLESLGGVVWIVLTNS--DHVRSAKEIADQTYTKIAGPVAEKENF-------------------------------PIYCDRWLSDGDELVPG---LKVMELQGKTPGELALLEETTLITGDLVRAYRAGGLEILPDKLMNKQKVVASVRRLAALEKEAVLVGDGWSVFRDGRDRLKELVAT.................................... 199
27 -40.5004fek_A mol:protein length:262 Putative diflavin flavoprotein A 5  ali model follow..  16  15..ATNTKVLRARSWSRLRFSNSYVIEGDK-TAIIDPPVEEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAQITFVCSLPAAGDLRA-------------------------AFPDDNLNILPMRGKETLDLGKGHLKFLPIPPRWPAGLCTYDTQILYTDKIFGAHICGRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPLVR-TSLIALTQAYADWSKAQKL............................. 255
28 -40.3006cqs_A mol:protein length:246 Beta-lactamase  ali model follow..  13  20..LPNAFVIT----FPWGGNSLVVLIGEKYAVFVDTPYTPEATENVLDNRQFIEINTGYHVDNLGGNDALLHR-NIPIIGSDKTVSLLREEATRQLTMGWLEGPGNEKFLKRHETIPYVGPSQIFQLTEGYHFTVGDEPIEVFFPETHAPDNIVVYFRKILFGGCMLRV------GTGNRADANMDTWKSSVERLRDFDCVAVIPGHGIRFDPGVIENTISVLP..................................... 246
29 -39.4001xm8_A mol:protein length:254 glyoxalase II  ali model follow..  19  1........MQIELVPCLKDNYAYILHDEGTVGVVDPSEAEPIIDSLKRSNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMDKDRI--------------------------------PGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGAIFTGDTMFSLSCGKL------EGTPKQMLASLQKITSLPDDTIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPT................. 206
30 -39.2004bp0_A mol:protein length:250 METALLO-B-LACTAMASE  ali model follow..  14  20..DSDVFVVT----DFYSSNVLVAKMLDGTVVIVSSPFENLGTQTLMDPKKVVAINTHFHLDGTGGNEIYKKM-GAETWSSDLTKQLRLE-ENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPPAHSPDNVVVYFKKLLFGGCMIKPKELGYLG-----DANVKAWPDSARRLKKFDAKIVIPGHGEWGGPEMVNKTIKVAEKAVGEM............................... 248
31 -39.0001ztc_A mol:protein length:221 hypothetical protein TM0894  ali model follow..  20  29...................STVVYLEHKDRRIIIDPGNLSSMDELISPDDITDVLFTHVHLDHIFNSVLFEN---ATFYVHEVYKTKNYLSF-------------GTIVGRIYSKVISSWKNVVLLKGEESLFDEK---VKVFHTPWHAREHLSFLLDRVLITGDIT----NRLSYYDIIKGYGSVQVKNFLDRVGRI--DLLVFPHDAPLKPEVKK............................................ 215
32 -38.2004wd6_A mol:protein length:233 Metallo-beta-lactamase  ali model follow..  12  13..KENIFLHT----FGLVSSNGLVVIDKGNAFIVDTPWSDRDTETLVHYELLGSVSTHWHEDRTAGIKWLNDQ-SISTYATTSTNHLLKENKKE----------------------------PAKYTLKGNESTLVDGLIEVFYPGGHTIDNVVVWLSKILFGGCFVRSLDSEGLGYTG--EAHIDQWSRSAQNALSREAQIVIPGHGKIGDIALLKHTKSLAETASNKSIQPNANASAD..................... 233
33 -38.0002ynt_B mol:protein length:233 GIM-1 PROTEIN  ali model follow..  15  13..EDGVYLHT----YGLVDSNGLVVLDNNQAYIIDTPWSEEDTKLLLSYQVMASISTHSHEDRTAGIKLLNSK-SIPTYTSELTKKLLAREG----------------------------KPVPTHYFKDDEFTLGNGLIELYYPAGHTEDNIVAWLSKILFGGCLVRSHEWEALGYVG--DASISSWADSIKNIVSKPIQMVVPGHGKVGSSDILDHTIDLAESASNKLMQPTAEASAD..................... 233
34 -37.8005ev6_A mol:protein length:230 Beta-lactamase IMP-1  ali model follow..  13  15..DEGVYVHT----WGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTYKIKGSISSHFHSDSTGGIEWLNSR-SIPTYASELTNELLKKDGKVQA----------------------------TNSFSGVNYWLVKNKIEVFYPPGHTPDNVVVWLRKILFGGCFIKPYGLGNLG-----DANIEAWPKSAKLLKSKKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPS........................ 229
35 -37.8005ve4_A mol:protein length:377 BpPRF  ali model follow..  15  28...................TYTYLLADSREAVLIDPVFEQVRRDAALIEELLYTIDTHVHADHVTGAWMLNRRIGSRIAISAASG----------------------------------AEGADRYLSHGDKVEFGTRYLTVRATPGHTDGCITLVLDNMAFTGDCL---LIRGTGRTDFQRGDAHTMFRAVGQIFTLPTACLYPAHD-------YRGLTVTSVGEERRFNPRLGGELCEEDFTGYMTN............ 223
36 -37.7003tp9_A mol:protein length:474 BETA-LACTAMASE and RHODANESE DOMAIN PROTEIN  ali model follow..  17  6.....LRRFYDEGLA----HASYLVGCQEEACVIDPARDVEPYLLTAKRRIVAALETHIHADFVSGAREMADRAGAAICVSDEGPPEWKSEY--------------------------VKAYPHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDALFSGDFV---FVGDVGRPDLLERVARQMFRSLRKFEALPDHVVLPAHGAGSACGKALGAVPSSTVGYEKLVNWALQHKDEDAFVQALLAGQ.......... 243
37 -37.7002uyx_A mol:protein length:228 BETA-LACTAMASE II  ali model follow..  11  23..NKNVWVHT-SFNGEAVPSNGLVLNTSKGLVLVDSSWDDKLTKELIEKRVTDVIITHAHASRIGGIKTLKER-GIKAHSTALTAELAKKNGY---------------------------EEPLGDLQTVTNLKFGNMKVETFYPKGHTEDNIVVWLYNILVGGCLVKSTSAKDLGNVA--DAYVNEWSTSIENVLKRNINAVVPGHGEVGDKGLLLHTLDLLK..................................... 228
38 -37.4005n55_A mol:protein length:266 Class B metallo-beta-lactamase  ali model follow..  12  50..ADGVWSHI-SFDGAVYPSNGLIVRDGDELLLIDTAWGAKNTAALLALPVTRAVSTHFHDDRVGGVDVLRKA-GVATYASPSTRRLAEAEGNEI-------------------------PTHSLEGLSSSGDAVRFGPVELFYPAAHSTDNLVVYVANVLYGGCAVLALSRTSAGNVA--DADLAEWPTSVERIQKHEAEVVIPGHGLPGGLDLLQHTANVVTAHKNRSVA............................. 265
39 -37.4005o7n_A mol:protein length:254 Beta-lactamase VIM-2  ali model follow..  11  32..ADGVWSHI-SFDGAVYPSNGLIVRDGDELLLIDTAWGAKNTAALLALPVTRAVSTHFHDDRVGGVDVLRAA-GVATYASPSTRRLAEVEGNEIP-----------------------THSLEGLSSSGDAVRFGPVEL-FYPGAAHSTDNLVVYVASVLYGGCAIYELSRTSAGNVA--DADLAEWPTSIERIQQHEAQFVIPGHGLPGGLDLLKHTTNVVKAHTNRSVV............................. 247
40 -37.3005n5g_A mol:protein length:253 Beta-lactamase VIM-1  ali model follow..  12  30..ADGVWSHI-SFDGAVYPSNGLIVRDGDELLLIDTAWGAKNTAALLALPVTRAVSTHFHDDRVGGVDVLRAA-GVATYASPSTRRLAEAEGNEI-------------------------PTHSLEGLSSSGDAVRFGPVELFYPAAHSTDNLVVYVANVLYGGCAVHELSSTSAGNVA--DADLAEWPTSVERIQKHEAEVVIPGHGLPGGLDLLQHTANVVKAHKNRSVAE............................ 246
41 -37.3005mmd_E mol:protein length:229 Metallo-beta-lactamase 1  ali model follow..  14  14..DNGVFLHK----WGLVSSNGLVVISGGKAFIIDTPWSESDTEKLVDYELAGSISTHSHEDKTAGIKWLNGK-SITTYASALTNEILKREG----------------------------KEQARSSFKGNEFSLMDGFLEVYYPGGHTIDNLVVWISKILYGGCFIRSLESSGLGYTG--EAKIDQWPQSARNTISKEAKIVVPGHGKIGDFELLKHTKVLAEKASNKANHGDR.......................... 229
42 -37.2002yz3_A mol:protein length:266 Metallo-beta-lactamase  ali model follow..  11  50..ADGVWSHI-SFDGAVYPSNGLIVRDGDELLLIDTAWGAKNTAALLALPVTRAVSTHFHDDRVGGVDVLRAA-GVATYASPSTRRLAEVEGNEIP-----------------------THSLEGLSSSGDAVRFGPVEL-FYPGAAHSTDNLVVYVASVLYGGCAIYELSRTSAGNVA--DADLAEWPTSIERIQQHEAQFVIPGHGLPGGLDLLKHTTNVVKAHTNRSVV............................. 265
43 -37.2003fcz_A mol:protein length:222 Beta-lactamase 2  ali model follow..  11  17..NKNVWVHT-SFNGEAVPSSGLVLNTSKGLVLVDSSWDDKLTKELIEKRVTDAIITHAHADRIGGIKTLKER-GIKAHSTALTAELAKKNGY---------------------------EEPLGDLQTVTNLKFGNMKVETFYPKGHTEDNIVVWLYNILVGGCLVKSTSAKDLGNVA--DAYVNEWSTSIENVSKRNINAVVPSHGEVGDKGLLLHTLDLLK..................................... 222
44 -37.1002nze_A mol:protein length:222 Beta-lactamase II  ali model follow..  12  17..NKNVWVHT-SFNGEAVPSNGLVLNTSKGLVLVDSSWDDKLTKELIEKRVTDVIITHAHADHIGGIKTLKER-GIKAHSTALTAELAKKNGY---------------------------EEPLGDLQTVTNLKFGNMKVETFYPKGHTEDNIVVWLYNILVGGSLVKSTSAKDLGNVA--DAYVNEWSTSIENVLKRNINAVVPGHGEVGDKGLLLHTLDLLK..................................... 222
45 -37.1004f6h_A mol:protein length:236 Beta-lactamase  ali model follow..  13  13..DEGVYVHT----WGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTYKIKGSISSHFHSDSTGGIEWLNSR-SIPTYASELTNELLKKDGKVQATNS-----------------------------SGVNYWLVKNKIEVFYPPGHTPDNVVVWLRKILFGGGFIKPYGLGNLG-----DANIEAWPKSAKLLKSKKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPSNWSHPQFEK............... 236
46 -37.1004uwo_B mol:protein length:266 METALLO-BETA-LACTAMASE VIM-26  ali model follow..  12  50..ADGVWSHI-SFDGAVYPSNGLIVRDGDELLLIDTAWGAKNTAALLALPVTRAVSTHFHDDRVGGVDVLRAA-GVATYASPSTRRLAEAEGNEI-------------------------PTHSLEGLSSSGDAVRFGPVELFYPAAHSTDNLVVYVANVLYGGCAVLELSSTSAGNVA--DADLAEWPTSVERIQKHEAEVVIPGHGLPGGLDLLQHTANVVKAHKNRSVA............................. 265
47 -37.1005acp_A mol:protein length:250 GIM-1 PROTEIN  ali model follow..  15  30..EDGVYLHTSFKNIEGYGSNGLVVLDNNQAYIIDTPWSEEDTKLLLSYQVMASISTHSHEDRTAGIKLLNSK-SIPTYTSELTKKLLAREG----------------------------KPVPTHYFKDDEFTLGNGLIELYYPAGHTEDNIVAWLSKILFGGCLVRSHEREGLGYVG--DASISSWADSIKNIVSKPIQMVVPGHGKVGSSDILDHTIDLAESASNKLMQPTAEASAD..................... 250
48 -37.0005b3r_A mol:protein length:228 IMP-18  ali model follow..  12  13..EKGVYVHT----WGVVTKHGLVVLVKNDAYLIDTPITAKDTEKLVNYRIKGSISTHFHGDSTAGIEWLNSQ-SISTYASELTNELLKKDNKVQA----------------------------TNSFSGVSYSLIKNKIEVFYPPGHTQDNVVVWLKKILFGGCFVKPDGLGNLG-----DANLEAWPKSAKILMSKKAKLVVSSHSEIGNASLLQRTWEQAVKGLNESKKPLQPSS....................... 228
49 -37.0001znb_A mol:protein length:232 METALLO-BETA-LACTAMASE  ali model follow..  13  37...................SNGMIVINNHQAALLDTPINDAQTETLVNAKVTTFIPNHWHGDCIGGLGYLQKK-GVQSYANQMTIDLAKEKGLPV---------------------------PEHGFTDSLTVSLDGMPLQCYYLGGHATDNIVVWLENILFGGCMLKDNQATSIGNIS--DADVTAWPKTLDKVKAKSARYVVPGHGDYGGTELIEHTKQIVNQYIESTSK............................. 231
50 -37.0004ubq_A mol:protein length:229 Beta-lactamase  ali model follow..  13  14..EEGVYVHT----WGVVSKHGLVVLVNTDAYLIDTPFTATDTEKLVNYKIKGTISSHFHSDSTGGIEWLNSQ-SIPTYASELTNELLKKDGKVQA----------------------------KNSFSGVSYWLVKNKIEVFYPPGHTQDNVVVWLKKILFGGCFVKPDGLGNLG-----DANLEAWPKSAKILMSKKAKLVVSSHSEIGDASLLKRTWEQAVKGLNESKKPSQPS........................ 228
51 -36.9001a7t_A mol:protein length:232 METALLO-BETA-LACTAMASE  ali model follow..  13  37...................SNGMIVINNHQAALLDTPINDAQTEMLVNAKVTTFIPNHWHGDCIGGLGYLQRK-GVQSYANQMTIDLAKEKGL---------------------------PVPEHGFTDSLTVSLDGMPLQCYYLGGHATDNIVVWLENILFGGCMLKDNQTTSIGNIS--DADVTAWPKTLDKVKAKSARYVVPGHGNYGGTELIEHTKQIVNQYIESTSK............................. 231
52 -36.7003l6n_A mol:protein length:219 metallo-beta-lactamase  ali model follow..  12  12..KNNLHIYK-VFGGKEYSANSMYLVTKKGVVLFDVPWEKVQYQSLMDLPVVAVFATHSHDDRAGDLSFFNNK-GIKTYATAKTNEFLKKDGKAT---------------------------STEIIKTGKPYRIGGEEFVVDFLEGHTADNVVVWFYNVLDGGCLVKSNSATDLGYIK--EANVEQWPKTINKLKAKKATLIIPGHDEWKGGGHVEHTLELLNKK................................... 219
53 -36.3006mgy_A mol:protein length:243 Metallo-beta-lactamase NDM-5  ali model follow..  10  28..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLLVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGLVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--DADTEHYAASARAFGAAKASMIVMSHSAPDSRAAITHTARMADK.................................... 241
54 -36.2004gyq_A mol:protein length:243 Beta-lactamase NDM-1  ali model follow..  10  28..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLVVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGMVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--AADTEHYAASARAFGAAKASMIVMSHSAPDSRAAITHTARMADK.................................... 241
55 -36.2001x8h_A mol:protein length:228 Beta-lactamase  ali model follow..  13  9..SGPVYVVE----NYYVQENSMVYFGAKGVTVVGATWTPDTARELHKKPVLEVINTNYHTDRAGGNAYWKSI-GAKVVSTRQTRDLMKS---------DWAEIVAFTRKGLPEYPDLPLVLPNVVHDGDFTLQEGKVRA-FYAGPAHTPDGIFVYFEQVLYGGCILKEKLGNLS------FADVKAYPQTLERLKAMPIKTVIGGHDSPLHGPELIDHYEALIKAAPQSS.............................. 228
56 -36.0002y87_A mol:protein length:265 METALLO-B-LACTAMASE  ali model follow..  10  49..GDGVWSHI-KLGDTVYSSNGLIVRDADELLLIDTAWGAKNTVALLALPVTRSISTHFHDDRVGGVDVLRAA-GVATYTSPLTRQLAEAAGNEVP-------------------------AHSLKALSSSGDVVRFGPVEVFYPAAHSGDNLVVYVVRVLFGGCAVHEASRESAGNVA--DANLAEWPATIKRIQQREAEVVIPGHGLPGGLELLQHTTNVVKTHKVRPVA............................. 264
57 -36.0001m2x_A mol:protein length:223 class B carbapenemase BlaB-1  ali model follow..  14  8..KDNLYVYT-TFNGTKYAANAVYLVTDKGVVVIDCPWGEDKFKSFTDKKVIMNIATHSHDDRAGGLEYFGKI-GAKTYSTKMTDSILAKENK---------------------------PRAQYTFDNNKSFKVGKSEFQVYYPKGHTADNVVVWFEKVLVGGCIIKSADSKDLGYIG--EAYVNDWTQSVHNIQQKGAQYVVAGHDDWKDQRSIQHTLDLINEYQQKQKAS............................ 222
58 -35.9004tyf_A mol:protein length:231 NDM-4  ali model follow..  10  16..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLVVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGLVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--DADTEHYAASARAFGAAKASMIVMSHSAPDSRAAITHTARMADK.................................... 229
59 -35.9003r2u_A mol:protein length:466 Metallo-beta-lactamase family protein  ali model follow..  15  31...................QASYLIGCQKEAMIIDPIRDLSSYIRVADETITHAAETHIHADFASGIRDVAIKLNANIYVSGESDDTLGYKNM---------------------------PNHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDGLFSGDFI---FVGDIGRPDLLEKAVKQMFKSIESIKDLPDYIIWPGHGAGSPCGKSLGAIPTSTLGYEKQTNWAFSENNEATFIDKLISDQ.......... 257
60 -35.9001qh3_A mol:protein length:260 PROTEIN (HYDROXYACYLGLUTATHIONE HYDROLASE)  ali model follow..  14  1........MKVEVLPALTDNYMYLVIDDKEAAIVDPVQPQKVVDAARKHKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDR-----------------------------------GALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKAVFTGDTLFVAGCGKF------EGTADEMCKALEVLGRLPPDTVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPT................. 210
61 -35.8003aj3_A mol:protein length:274 4-pyridoxolactonase  ali model follow..  19  1MSDTKVYLLDGGSLVLDGYVYSILIEHAEGRFLIDTGYDYDGLLGLEPRDIDVVVNSHFHFDHCGGNKYFPH---AKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATEGTTRANSTFEGIDGDVDLARG--VKLISTPGHSIGHYSLLVEPILFTIDAAYTQKSLETLCQAAFHIDPVAGVNSMRKVKKLAEDELMYSH...................................................... 252
62 -35.8005a5z_A mol:protein length:251 BETA-LACTAMASE NDM-1  ali model follow..  10  28..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLVVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGMVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--DADTEHYAASARAFGAAKASMIVMSHSAPDSRAAITHTARMADKLRLE................................ 245
63 -35.7005jqj_A mol:protein length:245 Metallo-beta-lactamase type 2  ali model follow..  11  30..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLMVDTAGTDAQTAQILKLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPREGVVAA---------------------QHSLTFAATGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIRDSKAKSLGNLD--EADTEHYAASVRAFGAAKASMIVMSHFAPDSRAAITHTARMADK.................................... 243
64 -35.6003rkk_A mol:protein length:237 Beta-lactamase NDM-1  ali model follow..  10  22..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLVVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGMVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--DADTEHYAASARAFGAAKASMIVMSHSAPDSRAAITHTARMADK.................................... 235
65 -35.3005ZIO Entity 1(prereleased)  ali follow..  10  27..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLVVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGMVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--DADTEHYAASARAFGAAKASMIVMSHSAPDSRAAITHTARMADK.................................... 240
66 -35.2003spu_A mol:protein length:265 Beta-lactamase NDM-1  ali model follow..  11  29..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLVVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGMVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--DADTEHYAASARAFGAAKASMIVMSHSAPDS----RAAITHTARMADKLRKLVPRGSAAAALE................. 257
67 -35.0004rl2_A mol:protein length:246 Beta-lactamase NDM-1  ali model follow..  10  31..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLVVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGMVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--DADTEHYAASARAFGAAKASMIVMSHSAPDSRAAITHTARMADK.................................... 244
68 -34.8005ew0_A mol:protein length:234 Beta-lactamase  ali model follow..  13  13..KGPLYIVE----KEYVQENSMVYIGTDGITIIGATWTPETAETLYKLPINEVINTNYHTDRAGGNAYWKTL-GAKIVATQMTYDLQKSQWGSIV-----------NFTRQGNNKYPNLEKSLPDTVFPGDFNLQNGSIRAMYLEAHTKDGIFVYFERVLYGNCILKENLGNMSFANRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIHDVGLIDHYLTLLEKAPK................................ 234
69 -34.7001vme_A mol:protein length:410 Flavoprotein  ali model follow..  17  18..DPEIYVLRI-EIPEGISYNAYLVKLNGANVLIDGWKGDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTIHDVEIIASNFGKRLLEG--------------------------FYGIKDVTVVKDGEEREIGGKKFKFVMTPWHWPDTMVTYLDGILFSCDVGGGYLLPTKYIVTVIGHYKNYILEGAEKLSSLKIKALLPGHGLIWKKDPQRSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVY 294
70 -34.6004exs_B mol:protein length:272 Beta-lactamase NDM-1  ali model follow..  10  55..APNVWQHTSYLDMPGFGSNGLIVRDGGRVLVVDTAWTDDQTAQILNLPVALAVVTHAHQDKMGGMDALHAA-GIATYANALSNQLAPQEGMVAA---------------------QHSLTFAANGWVEPATAPNFGPLKVFYPPGHTSDNITVGITDIAFGGCLIKDSKAKSLGNLG--DADTEHYAASARAFGAAKASMIVMSHSAPDSRAAITHTARMADKLRL................................. 271
71 -34.3002q9u_A mol:protein length:414 A-type flavoprotein  ali model follow..  14  14..IPGVYWVHGYHTDEGSSYNSYFIDDEC-PTVIDSVKYSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFNATFVCTKKCQEHLKI-------------------------LYGMEKATWLIVDDKYTLKIGKRTLKFIPVP-HWPDSTFTYCDKILFSNDGFGQHYATSRRWADECDVSHAQMRKALEVASTVEIKYILSAHGVSWRGDAMGAEYDRWSKGQHCQKKVTVVLDSMYGTTHRMALALLDGARST... 284
72 -34.0004v0h_A mol:protein length:266 METALLO-BETA-LACTAMASE DOMAIN-CONTAINING PROTEIN 1 1  ali model follow..  17  68...................AEAALEEAARGPILVDTGGPWAREALVAPGDVTLVVGTHGHSDHIGNLGLFPG---AALLVSHDFCLPGGRYLPHGLGEGQPLRLGPG--------------------------------LEVWATPGHGGQRDVSVVVAGTVVVAGDVFERDGDEDSWQALSEDPAAQERSRKRVLVV-ADVVVPGHGPPFR................................................. 236
73 -34.0005eht_A mol:protein length:253 N-acyl homoserine lactonase  ali model follow..  19  4ATVKKLYFVPAGRCMLDHSVWCYLLETEEGPILVDTGMPESAVN-YEPDDLLYIISSHLHFDHAGGNGAF---TNTPIIVQRTEYEAALHREEYMT--------------------ECILPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIESVLLTIDAS--TKENFEDEVPFAGFDPELALSSIKRLKEVVKKMIFFGH...................................................... 238
74 -33.9003dha_A mol:protein length:254 N-Acyl Homoserine Lactone Hydrolase  ali model follow..  20  5MTVKKLYFIPAGRCMLDHSVWCYLLETEEGPILVDTGMPESKRVGYEPDDLLYIISSHLHFDHAGGNGAF---TNTPIIVQRTEYEAALHREEYMK--------------------ECILPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIESVLLTIDAS--TKENFEDEVPFAGFDPELALSSIKRLKEVVKKIIFFGH...................................................... 239
75 -33.8002br6_A mol:protein length:252 AIIA-LIKE PROTEIN  ali model follow..  20  3MTVKKLYFIPAGRCMLDHSVWCYLLETEEGPILVDTGMPESAVN-YEPDDLLYIISSHLHFDHAGGNGAF---TNTPIIVQRTEYEAALHREEYMK--------------------ECILPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIKSVLLTIDAS--TKENFEDEVPFAGFDPELALSSIKRLKEVVKKIIFFGH...................................................... 237
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.