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Query: 3bvc_A mol:protein length:212 Uncharacterized protein Ism_01780, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSLSLFVTRLYHAPLSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGRALELEDLWINILPEGGSHASHIHPHSVISGTTYVSMPGGTSALKLEDPRHAMMMAAPARRKTARDELRQFIYVTPAVGDVLLWESWLRHEVPMNMSEDDRISVSFNYRWAEGLast
1 -96.3003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model  100  1MSLSLFVTRLYHAPLSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGRALELEDLWINILPEGGSHASHIHPHSVISGTTYVSMPGGTSALKLEDPRHAMMMAAPARRKTARDELRQFIYVTPAVGDVLLWESWLRHEVPMNMSEDDRISVSFNYRWAEG 206
2 -91.6002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  81  1MIKSLFATRLYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGEG 210
3 -28.5003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  9  26.AIHALDADEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATSVTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRRVYEPFEAPFNFAPHCDDVSYGRDTVNWPLKRSFPRQLGGFLTIQGADNDAGMVMWDNRPESRAALDEMHAEYREERAAKIMLKPQPGQLTLFQSKNLHAIER--CTSTRRTMGLFLIHTED 267
4 -24.6005iqs_A mol:protein length:315 WelO5  ali model follow..  11  47IQDIIINRSFDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIYGHAIVGQSPDLKDYFASSFRQACRTMFQGSPDFEEQVESIFHSLSIRLLLEGREIAVHVDLSDQLSYFIPLTVPEAGGELVVYSLEAQMQEYMDDVEFKIKSNQSQSVAYAPGPGDMLLFGGRYYHRVSEVIGNSPRRTIGGFLAFSKQ 300
5 -22.4004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  15  41..............QAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAIN-QGLFLGLEDFECHFALYPPGAFYRRHLDDRRMVSAVLYLNQPHDGGQLRMFLAD------------------GVEHDVEPVAGCLVVFLSEVPHEVLP--AGRERLSLT........ 212
6 -21.8002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  11  36..............VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLIRHCNGKL--GSYKINGRTKAMVACYPGNGTGYVRHVGDGRCVTCIYYLNDAKVSGGILRIFPEG----------------KAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 213
7 -21.4006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  10  59..............INNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRGDKIAWIGGDEKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYP-----GSGLGYIRHIDNGRCVTVLYYLNNSQDCGGQLWLYPNN----------------ENKVVKIDPIFDRLLLFWSRNPHEVKP--AYAMRYAIT........ 234
8 -21.1004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  11  29..............VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGR---KAMVACYPGNGTGYVRHVGDGRCVTCIYYLNDAKVSGGILRIFPEG----------------KAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 206
9 -21.1002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  11  31..............VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITEPGCETIGLLMSSMDDLIRHCNGKLG--SYKINGRTKAMVACYPGNGTGYVRHVDNGRCVTCIYYLNDAKVSGGILRIFPEG----------------KAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 208
10 -20.9002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  11  25..............VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLIRHCNGKLG--SYKINGRTKAMVACYPGNGTGYVRHVDDGRCVTCIYYLNDAKVSGGILRIFPEG----------------KAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 202
11 -20.5005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  11  36..............VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGIEGKEPGCETIGLLMSSMDDLVLHCNGKLG--SYKVNGRTKAMVACYPGNGTGYVRHVDNGRCVTCIYYLNDAKVSGGILRIFPEG----------------KAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 213
12 -20.4005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  12  31..............VDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTK-ACYPGNGLGYVRHVDNGRCITCIYYLNDVKVHGGLLQIFPEG----------------RPVVANIEPLFDRLLIFWSRNPHEVKP--AYATRYAIT........ 208
13 -20.3005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  10  36..............VDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKELMSSMDDLICHCNGKLGSYKINGRTKAMVACY-----PGNGTGYVRHVDNCN-VTCIYYLNDAKVSGGILRIFPEG----------------KAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAIT........ 213
14 -20.1003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  13  18..............IPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRK------RNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPL---FNRYQGGETFGYHIDIRTDLSATLFLSEPEQGGELVIQD-------------------TYGQQSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMW....... 186
15 -17.8004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  14  3MVPALTREQLYIFDIPGVFGSGEVESFRSELERLDTVDPGFPRTRRYPDLPAASPV--FARLALDDRLLAPVRDVVNQPLRLLEGYGLRRTKDSVLYLHGQVGRDLSITHTYHDGKLYCPYVKALVYLSQSPEDGSFCYVQGSHKANFPLLRERAERGEGFPTLSDVFVRSGDVLLLNEALMHGTRRKLTEGDRLLTAFGY..... 227
16 -17.6003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  10  50......SQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRPNLFKLRQILSKQYRDFFGYVT-KAGKLSGSKTDMSINTYTKGCHLLTHDRRISFILYLPDPDKSHYGGGLRLFPS-----------ILPNVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQ........ 242
17 -17.4002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  10  36..............LRNVLDRDLVKTVAEQMREGLVALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIGTFWIRTTRESGGVALNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRMRMSMDTRVQP. 252
18 -17.3004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  10  47......SQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRPNLFKLRQILSKQYRDFFGYVT-KAGKLSGSKTDMSINTYTKGCHLLTHDRRISFILYLPDPDKSHYGGGLRLFPSIL-----------PNVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQ........ 239
19 -17.3006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  14  57...DVYSFPLF--------TPAFCKEVIEVMDK-ANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDINLAFVVKYDMERQSELAPHHDSSTYTLNIALNEYGKEAGGCEFIR--------------------HKFIWQGQKVGYATIHAGKLYHRALPITSGKRYILVSF....... 227
20 -17.1003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  10  31......SQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRPNLFKLRQILSKQYRDFFGYVT-KAGKLSGSKTDMSINTYTKGCHLLTHDRRISFILYLPDPD-SHYGGGLRLFPSIL-----------PNVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQ........ 223
21 -16.0002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  10  38.........VIKNLVPDADIQRFRNEFEKICRKEVKKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSG-LIVCAWTAMEHISRNN----------GCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASAD. 256
22 -15.4005epa_A mol:protein length:279 SnoK  ali model follow..  12  34..............IPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEAQAWQKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKRT-ATLTAWIALTDVPVER----------GCMSYVPGSHLRAREDRQEHMTSFAEFRDLADVWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDAD. 237
23 -15.4004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  12  75.....FLHCVIPNFIQS---QDFLEGLQKELMNLDFHEKYND----------YKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMS---CAKYEFTDALLCHELEGRRIAFILYLV-RSMGGTLDLYSID------------EHFQPKQIVKSLIPSWNKLVFFSPVSFHQVEVLSEEKSRLSIS........ 248
24 -15.2001lr5_A mol:protein length:163 Auxin binding protein 1  ali model follow..  16  42...................................................................................................EVWLQTISPGQRTPIHRHSC---EEVFTV---KGKGTLLMGS--------------SSLKYPGQPQEIPFFQNTTFSIPVNDPHQVW-NSDEHEDLQV......... 119
25 -15.1004xbz_A mol:protein length:334 EvdO1  ali model follow..  12  53.........VVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAG--HPLLLRIMEQL-----GPNLIPTWDSMVFKTPAGAPRLAWHRDAVIDAGIYLDPAPEDNCVWCNYWGDDRLTATADQLNASEWDTTGAVPAVMQPGDLLLHNILTLHGAPAVVGKQRRIYFEYR...... 256
26 -15.1004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  10  43..............QMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEG---FVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCK----------FQFKPIRVSEPVLSLPVRRGSVTVLSGYATHCIRPQDIKERRAVIILR...... 235
27 -15.1004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  9  13.ARRVKSGIKQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEG---FVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCK----------FLFKPIRVSEPVLHLPVRRGSVTVLSGDITHCIRPQDIKERRAVIILR...... 214
28 -14.8004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  7  23..............AGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLHREELAQLAAAFVDGPVVPTAYALVLKEPYRAAEVPWHRDTVCNLSICLDAGPHNGCLEA----PGSHLLPDDAEVAKVRATGPVVPVPVSQGDVVVHDVRLVHGSGPNANGSWRRTIVIEYADPA. 218
29 -14.7004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  10  24...................SQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEG---FVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCK----------FQFKPIRVSEPVLSLPVRRGSVTVLSGEITHCIRPQDIKERRAVIILR...... 211
30 -14.4005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  12  45..............LDAGEVAEYLAEARRLLAHEESRWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENKEK-----------DASVPTAPHHDAGTALTAWVALVVPVERGCMTFVPGSHLLPDPDTGDETRPGEIWMPRVTVPLRAGDCTFHHARTVHSAGANSTDEPRLSTSAVYMDAT. 240
31 -14.4004xab_A mol:protein length:252 EvdO2  ali model follow..  9  26..............LPQVASESEVAWLRQAYDRLFVRRATPGAEAGQRDREGPPLLPQIIKPEKYVPELLDSPH--FARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHRWRRRGLSIWTTLDATVESGCLHYLPGGHRGPVLPHHHIDNDDRDPTSAVACPLAPGGAVVHDFRTPHYAGPNLTDQPRRAYVLVFMSAP. 237
32 -14.4005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  11  22..............LEGAFSPEEVHVMRQALKKDQEVQGEEDGRTVRALYASHTRQSVFDQLSRSDRLLGPATQLLECDLYIHQFKINTKRAFGGDSWA--W------------HLPAPRAVNVGVFLSVTEFNGPVVFLSGSHQRDYSMTPAELSQMVEKHPMVSPKAASGSVMLFHPEIIHGSAPNISPFARDLLIITYNDVAN 236
33 -14.3004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  13  51..............LEDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQS-NEIRSIFEIHAQSPVMARLAARLADVARFLLGD--------EVYIHQSRLNYKPGFKGREFYWHSDRALSMSVLLANTPHNGPLMVSSLKKQEYGVPDEESLAELAHRHGIVAPTGKPGTVILFDCNLMHGSNGNITPFPRANAFLVYNAVSN 270
34 -14.3006EC3 Entity 1(prereleased)  ali follow..  12  268..............FADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELRPELAELAAAFVGS--------PVVPTAFALVLKEPKRAAGVPWHPHTVCNLSICLDAGPENGCLEG----PGSHLLPDDIDVPEIRDGGPRVPVPSKVGDVIVHDVRLVHGSGPNPSDQWRRTIVIEFANPA. 457
35 -14.2005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  11  41.........IVEQVICPNIIAKISDDVNRVMDK--ATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNFAHEVLEKVFKK-----DSGDYWLNMGNILNMLPGAAQRPHRDDYLYINITFPLEFRHDNGGTLLLPKSHT-------PNADFYANAEDLPAAEMQVGDALIFTGKCVHGGGANRSDKPRIGLALAA..... 238
36 -14.1004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  10  40.........IIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWL-DHVARVHNLVDFSHCFRHENHELLHKICRLTFE-----ESGDYWLGYGAVIENGPGT-TEQKWHRDQMLNFFTALDFDAETGKTQYILGSNK-------VELGEPDADHPIEYVGLKPGDTTIVSGKITHRGSDNRSDKMRRAMPIMII.... 242
37 -13.8005apa_A mol:protein length:220 ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE  ali model follow..  13  98.............................................................................KGAPKTCTLLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPNCRLRMHLGLVIPKEGCKIRCANETKT------------------------EEGKVLIFDDSFEHEV--QDASSFRLIFIVDV..... 198
38 -13.8005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  9  42.........IIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKRKLVTTSPTFRHEILENDLMHELLQRV----------FSKPGEGMGYHFNDTMVIEVQPGA-QRLHRAPECLVNFFCAVTTVENGATRLVPGSNRWPELTLINATDCPQYGKIDSVPAIMQPGDCYMMSGKVIHGAGHNATSDQRRALAFSTI.... 244
39 -13.7001v70_A mol:protein length:105 probable antibiotics synthesis protein  ali model follow..  17  34........................................................................................................ALLPGQAQKVHVHEGS--DKVYYA---EGEVVVRVGEEE-----------------------ALLAPGMAAFAPAGAPHGVRNESASPALLLVVTA...... 102
40 -13.6004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  13  107.........VELAYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFSNDGHRIRKPHKDNLDIPSSLFYFNFQNTEGYLELTD----------------------NCKVFVQPGDVLFFKG-YKHVVAN--TSGWRIGLVY....... 294
41 -13.6003emr_A mol:protein length:310 EctD  ali model follow..  10  50.........QIKNFFSEDEVIDMQKAIFELQDSIKDVASEPESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLLGSDVYVHQSRINYKPGFKGKEFD--WHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLSLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSVKN 271
42 -13.5002xl7_A mol:protein length:239 SLL1785 PROTEIN  ali model follow..  8  28................................................................................NEIFDIASCSAKDIGFAIAHA---QIPPGGGPMPHIHYFI--NEWFWT-----EGGIELF--STKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM...... 137
43 -13.5004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  10  19.....GVVQLDQRRLTDDLAVLAKSNFSSEYSDFACGRWEFCMLRNQSGKQEEQRVVVHETPALATPLGQSL-----PYLNELLDNHFDRDS-----IRYARIIRISENACIIPHRDYLELEGKFIRVHLV---------------------DTNEKCSNTEENNIFHMGRGEIWFLDASLPHSAG-CFSPTPRLHLVVDIEGTR. 187
44 -13.4003nnf_A mol:protein length:344 CurA  ali model follow..  6  39..............IKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNAL-FSFTKTEDFGASIWIPLVSTKIFPGQFYYSVFDLHLKNNIKWDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRLVDY 269
45 -13.4002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  10  24....IGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDLDAISGGTNIANYDRHLDDDFLASHICRPEICDRVESILGPNVLCWRTEFFPKYPGDE-GTITVWTAFTDANIAN-PGTQNSMNYDETKRMTYEPDANNSVVKDGVRRGFFGYDQIDENWKPDEASAVPMQMKAGQFIIFWSTLMHASYPHESQEMRMGFASRYVPSF. 262
46 -13.3003h8u_A mol:protein length:125 uncharacterized conserved protein with double-stranded beta-helix domain  ali model follow..  15  3.........................................................GVNMRAETESRIFSVDEYVRPSNGEPIRSVVLETNDSVVVVW-----HAHPGQEIASHVHPHG--QDTWTV---SGEAEYHQGNGI----------------------VTHLKAGDIAIAKPGQVHGAM-NSGPEPFIFVSV....... 112
47 -13.2001o4t_A mol:protein length:133 putative oxalate decarboxylase  ali model follow..  23  57........................................................................................................KLPPGSSVGLHKHEGE--FEIYYI---LGEGVFHDNGKD-----------------------VPIKAGDVCFTDSGESHSIE-NTGNTDLEFLAV....... 123
48 -13.1005j7m_A mol:protein length:123 Cupin 2 conserved barrel domain protein  ali model follow..  26  42........................................................................................................SVPPGDESPIDQHPE---LELSIV---AGTAHVTVGDTV-----------------------HEVPHGNAFLLNSLEAHVVQ-NRSADEVLTV......... 105
49 -13.1005ybm_A mol:protein length:314 PrhA  ali model follow..  11  42.........VIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKRKCVIASPTFRNEIIESDLMHELCDRV----------FSKPGEGMGYHFNDNMVIEVQPGAAQRLHRDPECVINFFCAVPFTEENGATRL-GSHLWPEFTQINERDCPQFGKIETVPAIMQPGDCYLMSGKVIHGAGHNATTDRRRALALAII.... 244
50 -13.1003sxw_A mol:protein length:201 Glucose-6-phosphate isomerase  ali model follow..  12  79.......................................................................................................KVGKEFFFAKGHFHAKLDRAQVAVA---KGKGGVLMQTPEG------------------DAKWISSEPGTVIYSPPYWAARAV-NIGDEPFIMLVI....... 153
51 -13.1005tfz_A mol:protein length:150 dimethylsulfoniopropionate lyase DddK  ali model follow..  22  60........................................................................................................EIAPGGDLTLHYHSP---AEIYVV---NGKGILNKSGKL-----------------------ETIKKGDVVYIAGNAEHALKNNGKETLEFYWIFP...... 127
52 -13.1005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  9  35.........VIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMNDELLHGLCKRLFGP---------ESGDYWLTTSSVLETEPGYGQELHRSPESMLNFLTALDFTAENGATRVLPGSHL------EDFSAPPPKADTAIPAVMNPGDAVLFTGKTLHGAGKNNTDFLRRGFPLIM..... 229
53 -13.0002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  14  111.................................................................DPVFKSITH--SFKVQTLARSL----QMPVVVQSMYIFKQPHFGGEVSPHTEPLGRVLGVWIADATLENGCLWFVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASG 269
54 -13.0005jqy_A mol:protein length:429 Aspartyl/asparaginyl beta-hydroxylase  ali model follow..  13  313.............................................................................KGAPKTCTLLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPNCRLRMHLGLVIPKEGCKIRCANETKT------------------------EEGKVLIFDDSFEHEV--QDASSFRLIFIVDV..... 413
55 -13.0004lta_A mol:protein length:189 Glucose-6-phosphate isomerase  ali model follow..  12  77.......................................................................................................KVGKEFFFTKGHFHAKLDRAEVYVA---KGKGGMLLQTPEG------------------DAKWISMEPGTVVYVPRGWAHRTVNIGDEPFIFLAIYP...... 153
56 -12.9003kgz_A mol:protein length:156 Cupin 2 conserved barrel domain protein  ali model follow..  17  51.........................................................................................................VDEGGYSTLERHAH---VHAVMI---RGHGQCLVGETI-----------------------SDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVN...... 117
57 -12.9004h7l_A mol:protein length:157 uncharacterized protein  ali model follow..  11  49......................................................................................................VHYTQITKAARTHYHREH--QEIYVVLDHAAHATIELNGQS-----------------------YPLTKLLAISIPPLVRHRI---VGEATIINI......... 115
58 -12.8003ht1_A mol:protein length:145 RemF protein  ali model follow..  17  45........................................................................................................EVSPNGSTPPHFHEW---EHEIYV-----EGSMGLV--------------------PDQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAP...... 114
59 -12.7001fi2_A mol:protein length:201 OXALATE OXIDASE  ali model follow..  18  79.........................................................................................................FAPGGTNPPHIHPRA--TEIGMVMKGELLVGILGSLDSGNKLYSR-----------------VVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFN...... 154
60 -12.7004mv2_A mol:protein length:128 plu4264  ali model follow..  19  40........................................................................................................IVRPETKSFRHSHNE---YELFIV---QGNAIIRINDED-----------------------FPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIW....... 106
61 -12.6003jzv_A mol:protein length:166 uncharacterized protein Rru_A2000  ali model follow..  13  2............................................SLSDSNDDRPFRPFQSQYRWPGVDLLAYKEEGSAPFRSVTRQVLFSGNGLTGELR---YFEVGPGGHSTLERHQH---AHGVMI---KGRGHAMVGRAV-----------------------SAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVN...... 126
62 -12.6003gja_A mol:protein length:319 CytC3  ali model follow..  8  32..............FEPEEMTRRWNIIRRQLLDRSLAYPDSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEFFPKYQGDE-GTITVWTAFTHSTEQN-LQLMPGTHTSMNYDESKGMDYDADAINQREFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWSNTMHASLPHTGSKTRMGFAARYVPTQ. 264
63 -12.6003ibm_A mol:protein length:167 Cupin 2, conserved barrel domain protein  ali model follow..  15  62........................................................................................................EVEPGGYTTLERHEH---THVVMV---RGHAEVVLDDRV-----------------------EPLTPLDCVYIAPHAWHQIH-ATGANEPLGF......... 125
64 -12.5005cu1_A mol:protein length:212 DMSP lyase  ali model follow..  7  1..............MSSGSMTQTDPAFQNLLAEFQALHAREPALAGFVALPD-VRIPPAALMESDPDLTTTAYAAIRDAFIAAGAVAQWRLTYQGSRLGADFMDYMPAGLYYPFHQHPA---EEIYFI-----AGEAEFL--------------------MEGHPPRRLGPGDHVFHPSGHPHATR--TYDRPFMAL......... 186
65 -12.5004e2g_A mol:protein length:126 Cupin 2 conserved barrel domain protein  ali model follow..  17  48.........................................................................................................IEPNTEMPAHEHPHEMLEGTLELTIGEETRVL--------------------------------RPGMAYTIPGGVRHRARTFEDGCLVLDI......... 111
66 -12.5005fq0_A mol:protein length:114 KDGF  ali model follow..  16  39.........................................................................................................FDRGAVGTPHQHERH--DQIGYV-----QGAFEVE----------------------EGEKRRLSPGDAFVAPHHTMHGAVALEPDSLVIDL......... 103
67 -12.5002i45_A mol:protein length:107 Hypothetical protein  ali model follow..  7  8...............................................................................LKQHLAAIKEYWQPEIINRHGFQFHLVKLLGDYGWHTHGYS--DKVLFA-----EGDMAVD--------------------FADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVL........... 97
68 -12.5001x7n_A mol:protein length:190 Glucose-6-phosphate isomerase  ali model follow..  14  78.......................................................................................................KVGKEFFFTKGHFHAKLDRAEVYVA---KGKGGMLLQTPEG------------------DAKWISMEPGTVVYVPPYWAHRTV-NIGDEPFIFLAI....... 152
69 -12.4001vj2_A mol:protein length:126 novel manganese-containing cupin TM1459  ali model follow..  17  48........................................................................................................TVEPGGLIDRHSHPW---EHEIFV---KGKLTVLKEQGE-----------------------ETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLI....... 114
70 -12.4004qwn_A mol:protein length:329 Lysine-specific demethylase 2A  ali model follow..  11  164.....................................................................................................YCLMSVRGCYTDFHVDFGGIHQGVFWLIPPTAHNLELYEN-----LLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAV----TPTDTLVFGGNFLHSFN 269
71 -12.4004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  10  35.........ILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADKYPPHFKYVPNVATTCPTFRNNPVIHAICEAYFQ-------------RTGDYWLSAAFLREIESGM-PAQPFHRDDSLSVIFPLEFTEENGATEV---------GSHRWTEVGTPERDQAVLATMDPGDVLIVRQRVVHAGGGNRTTAGKPRRVVLAYFNSV 231
72 -12.3003lag_A mol:protein length:98 uncharacterized protein RPA4178  ali model follow..  14  18...................................................................................................RVTEWRLPPGSATGHHTHGMDYV--VVPMA----DGEMTIVAPDG------------------TRSLAQLKTGRSYARKAGVQHDVR-NESTAEIVFLEIELK.... 95
73 -12.3004lul_A mol:protein length:189 Glucose-6-phosphate isomerase  ali model follow..  14  77.......................................................................................................KVGKEFFFTKGHFHAKLDRAEVYVA---KGKGGMLLQTPEG------------------DAKWISMEPGTVVYVPADWAHRTV-NIGDEPFIFLAI....... 151
74 -12.3005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  6  36..............IESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLSTTTRVNVLAPISKAYREDNSKVLHRICSDAFH-----VYGDYWVLMGAVMELAPSNAQPLHRAPATSINFLVALPFTAENGATHV---------GSHKWQNLSNVSMDATVRALMNPGDALLITDSTIHCGGAETTTETRRLLTITM..... 231
75 -12.3005wsd_A mol:protein length:118 Uncharacterized protein tm1459  ali model follow..  17  46........................................................................................................TVEPGGLIDRHSHPW---EHEIFV---KGKLTVLKEQGE-----------------------ETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIP...... 113
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.