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Query: 3ee4_A mol:protein length:323 Probable ribonucleoside-diphosphate reductase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAGMTRTRSGSLAAGGLNWASLPLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLALRLIEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPVAEIDVDYSPAQLEDTFADEDRRTLAAASALast
1 -104.0003ee4_A mol:protein length:323 Probable ribonucleoside-diphosphate reductase  ali model  100  1MAGMTRTRSGSLAAGGLNWASLPLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLALRLIEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPVAEIDVDYSPAQLEDTFADEDRRTLAAASA 317
2 -78.3004hr0_A mol:protein length:316 Ribonuleotide reductase small subunit  ali model follow..  33  22................IDWEHPMFKLYEKARNGKWNPADIDFSQDQKDFASLTSEEKISALPLVAGFSAGEEAVTLDILPMAHALARQGRLEDVLFLTTFMHDEAKHVEMFSRWQQAVGIGQMDLSVFHN-DHYKRIFYEALPEAMNRLYADDSPEAVIRAATVYNMIVEGTLAESGYYTFRQIYKKAGLFPGLLQGIDYLNMDEGRHIQFGIYTIQRIVNEDERYYELFIRYMDELWPHVIGYVDYLTEQLARTYALEIDYDLLRHYVIKQFNLRKKQISRTKRVDVV------EGLEKTAA.............. 308
3 -70.9003vpm_A mol:protein length:286 Ribonucleoside-diphosphate reductase subunit M2  ali model follow..  16  8.LLRENPRRFVIFPIEYHD---IWQMYKKAEASFWTAEAVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERF--SQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLF---NAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSF-ASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSE------ERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVE------NPFDFM................ 286
4 -70.4002vux_A mol:protein length:326 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2 B  ali model follow..  15  31PLLRKSSRRFVIFPIQYPD---IWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERF--SQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWA---LRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIF-WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE------ERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAE------NPFDFMENISLEGKTN...... 320
5 -69.8004d8f_A mol:protein length:366 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  18  34LVNCNQVDVNQLVPIKYKW---AWEHYLNGCANNWLPTEIPMGKDIELWKSLSEDERRVILLNLGFFSTAESLVGNNIVLAI--FKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILS-FHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEITPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTK------NPFPWMSNFFETRVIEYQHAAS 357
6 -69.6002o1z_A mol:protein length:311 Ribonucleotide Reductase Subunit R2  ali model follow..  14  31KILSKETDRFTLYPILYPD---VWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDNEKHFIKHVLAFFAASDGIVLENLASKF--LRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKERMNLFHAIENIPAVKNKA----LWAAKWINDTNSFAERIVANACVEGILFSGSF-CAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPE------EVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAK------NPFNWMD............... 310
7 -69.1002rcc_A mol:protein length:346 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  13  22ILNGKSSNVLNWDDVRFSW---AYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFLDSVQTDYSMRAA---EYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWKHDDVLKEREFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFY-NLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPMKWIRAYEDVNSGKSDFFEQKSRQYAKVSA 339
8 -69.0002uw2_A mol:protein length:332 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 SUBUNIT  ali model follow..  14  14PLLRENPRRFVIFPIEYHD---IWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERF--SQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALR---WIGDKEATYGERVVAFAAVEGIFFSGSFASIF-WLKKRGPMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSE------ERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVE------NPFDFMENFFEKRVGEYQRMGV 317
9 -68.5006cwo_A mol:protein length:344 Ribonucleotide reductase  ali model follow..  11  19......DKRVNYKPFEYPE---VLQFTEAINKAYWVHTEVDFTADTQDFHALSLAEKTAVKNSLLAIAQIEVAVKSFWGNIYEHFPK---PEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDEFEKLLDVPVIRRRV---DYLSNVLKDTKSQDNRKYMVSLILFSILIENVSLFSQFAILLSFTRFKGYMKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPDYDEETLALVRETVKDSIAVESDILDIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPVIFDVKVEDEEEVFANSLDDFFAKRPVEYTKHDK 330
10 -67.6001jk0_B mol:protein length:345 ribonucleoside-diphosphate reductase small chain 2  ali model follow..  13  26ILLMENSRRFVMFPIKYHE---IWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKYLIENF--SAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHK----AAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMF-WLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNP------KIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAV------NPFEFMETFFEKKVSDYQKASD 328
11 -67.4004bmo_A mol:protein length:322 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA  ali model follow..  12  2.......RAVNWNKKEDDF---SLMFWKQNIAQFWTEEEIAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV--LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAITSYYRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPL-YLAGQGKLTASGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQEVQKETQELLMELYEIEMAYTEEIYTS---IGLVEDVNRFVRYNANKGLMNLGLEPKFEEEE--NGLRTDTKNHDFFSVKGNGYVKATN 309
12 -67.4003n37_A mol:protein length:319 Ribonucleoside-diphosphate reductase 2 subunit beta  ali model follow..  12  1.MKLSRISAINWNKISDDK---DLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSL--MPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA------QIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPM-YFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQEELKSFAFDLLLELYDNELQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNSPNADENHDFFSGSGSSYVMGKA 309
13 -66.8002p1i_A mol:protein length:349 Ribonucleotide reductase, small chain  ali model follow..  13  32KILNKESNRFTLHPIMYPE---VWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKHVLAFFAASDGIVLENLASKF--LREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKA----LWAAKWINDTNSFAERIVANACVEGILFSGSFCAIF-WFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPE------NVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSK------NPFNWMDNFFEKRVADYQKSGV 334
14 -66.7001r2f_A mol:protein length:319 PROTEIN (RIBONUCLEOTIDE REDUCTASE R2)  ali model follow..  12  1.MKLSRISAINWNKIQDDK---DLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSL--MADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKA------QIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPM-YFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEEELKLFALDLLMELYDNEIRYTEALYAE---TGWVNDVKAFLCYNANKALMNLGYEALFPPEMADVNSPNADENHDFFSGSGSSYVMGKT 309
15 -66.5001kgn_A mol:protein length:329 Ribonucleotide reductase protein R2F  ali model follow..  12  10ANHTDPVKAINWNVIPDEK---DLEVWDRLTGNFWLPEKIPVSNDIQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISL--LPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKA------KIIMSYYNGDDPLKKKVASTLLESFLFYSGFYLPM-YLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAQEEYKAYTFDLMYDLYENEIEYTEDIYDD---LGWTEDVKRFLRYNANKALNNLGYEGLFPTDELSSLSPNADENHDFFSGSGSSYVIGKA 319
16 -66.0003hf1_A mol:protein length:351 Ribonucleoside-diphosphate reductase subunit M2 B  ali model follow..  14  33PLLRKSSRRFVIFPIQYPD---IWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERF--SQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR---WIADRKSTFGERVVAFAAVEGVFFSGSF-AAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE------ERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAE------NPFDFMENFFEKRVSEYQRFAV 336
17 -66.0006ebo_A mol:protein length:355 Ribonucleoside-diphosphate reductase, beta subunit  ali model follow..  13  30FDQSQNMRAINWNKIVDEK---DLEVWNRVTQNFWLPENIPVSNDLPSWNELDDDWQQLITRTFTGLTLLDTVQSSIGDVAQ--IKNSLTEQEQVIYANFAFMVGVHARSYGTIFSTLCTSEQIEEAHEWVVDNEALQARP------KALIPFYTADDPLKSKIAAALMPGFLLYGGFYLPF-YLSARGKLPNTSDIIRLILRDKVIHNFYSGYKYQLKVAKLSPEQAEMKQFVFDLLDKMIGLEKTYLHQLYDG---FGLADEAIRFSLYNAGKFLQNLGYESPFTKEE--TRIAPEVFAQDFFSGSGSSYIIGTS 339
18 -65.8001uzr_A mol:protein length:296 RIBONUCLEOTIDE REDUCTASE R2-2 SMALL SUBUNIT  ali model follow..  13  5AKLIDRVSAINWNRLQDEK---DAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSL--IPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDDAFRWSEENRNLQRKA------EIVLQSYRGDEPLKRKVASTLLESFLFYSGFYLPM-YWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVRAELKDYTYELLFELYDNEVEYTQDLYDE---VGLTEDVKKFLRYNANKALMNLGYEALFPRD----ETDVNPAILSALSPNAD....... 296
19 -65.6004n83_A mol:protein length:319 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  11  2...QTYYKAINWNAIEDVI---DKSTWEKLTEQFWLDTRIPLSNDLDDWRKLSHKEKDLVGKVFGGLTLLDTLQSESGVDAL--RKDVRTAHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYL------QKKAEIINEIYLNGTALEKKIASVFLETFLFYSGFFTPL-YYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEEKLKEWMYDLLYTLYENEEGYTESLYDT---VGWTEEVKTFLRYNANKALMNLGQDPLFPDSAVMNGISTGTSNHDFFSQVGNGYLLGEV 307
20 -64.3006gp2_A mol:protein length:345 Ribonucleoside-diphosphate reductase beta chain  ali model follow..  14  26QGFKGKMRSVNWNVVNDEK---DLEVWNRITQNFWLPEKIPVSNDLTSWRTLTPEWQELITRTFTGLTLLDTIQATVGDV--AQVPNSLTDHEQVIYTNFAFMVAVHARSFGSIFSTLCSSEQIEEAHEWVINTETLQERA------KALIPYYVNDDPLKSKVAAALMPGFLLYGGFYLPF-YLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLSPEQAEMKEFVFKLLYELIDLEKAYLKELYED---FGLADDAIRFSVYNAGKFLQNLGYDSPFTEEETRILSARADENHDFFSGNGSSYIMGVS 335
21 -64.2004dr0_A mol:protein length:350 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  9  14HMMTKIYDAANWSKHEDDF---TQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIVAEHVDGHQRK-AVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASVYLESFLFYSGFYYPLY-FYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKAELREFAIDLLNQLYENELEYTEDLYDQ---VGLSHDVKKFIRYNANKALMNLGFDPYFEEEDVLNGLNTKTKSHDFFSMKGNGYKKATV 327
22 -63.7001h0n_A mol:protein length:390 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE  ali model follow..  15  72PLLRENPRRFVVFPIEYHD---IWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERF--SQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWA---LRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF-WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAE------QRVREIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVE------NPFDFMENFFEKRVGEYQRMGV 375
23 -63.5001biq_A mol:protein length:375 PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE  ali model follow..  12  17MFFGQPVNVARYDQQKYDI---FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL--LPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIELRELKKKLYLCLMSVNALEAIRYYVSFACSF-AFAERELMEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDIAEECKQECYDLFVQAAQQEKDWADLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSINTWLVSDNVQVAPQEVEVSSYLVGQI 361
24 -63.4001mrr_A mol:protein length:375 RIBONUCLEOTIDE REDUCTASE R1 PROTEIN  ali model follow..  11  17MFFGQPVQVARYDQQKYDI---FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL--LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDIAEECKQECYDLFVQAAQQEKDWADYLFRDSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSINTWLVSDNVQVAPQEVEVSSYLVGQI 361
25 -63.3001pfr_A mol:protein length:340 PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE  ali model follow..  12  17MFFGQPVNVARYDQQKYDI---FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL--LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDETVSLRELKKKLYLCLMSVNALEAIRFYVAFACSF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDIAEECKQECYDLFVQAAQQEKDWADYLFRDSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS-----NPIPWINTWL............ 339
26 -63.0001pj0_A mol:protein length:375 Ribonucleoside-diphosphate reductase 1 beta chain  ali model follow..  12  17MFFGQPVNVARYDQQKYDI---FEKLIEKQLSFFFRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLESIQGRSPNVAL--LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDETVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDIAEECKQECYDLFVQAAQQEKDWADYLFRDSMIGLNKDILCQYVEYITNIRMQAVGLDLPFPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 361
27 -62.0001jk0_A mol:protein length:419 ribonucleoside-diphosphate reductase small chain 1  ali model follow..  14  91PLLNEDKERTVLFPIKYHE---IWQAYKRAEASFWTAEEIDLSKDIHDWNNMNENERFFISRVLAFFAASDGIVNENLVENF--STEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALR---WIQDADALFGERLVAFASIEGVFFSGSF-ASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDP------AIVEKIVTEAVEIEQRYFLDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVE------NPFDFMENFFEKRVSDYQKAGV 395
28 -56.5005uxg_A mol:protein length:220 aldehyde deformylating oxygenase  ali model follow..  19  2............................................D-KNWFSTPQEIREGIKYLSAHFYPASIMDRWKILKKLSFEKA---KIIANYSLQQVIEEIEHFDFFNEYFKEDPLTTV------------RLPPSYIKLFDGLVEDFQSSRWRENIATRFHMITEGVLATVGLKILNE-TSRKYNLLKFNEGIKRIIEDEARHVSFGLSLIEDKEYAVKR--------VEELFPLAVQIVKEGKDKIEP---LGYSIQELVNLMEELKKARINKI..................................... 209
29 -54.2005olk_A mol:protein length:430 Ribonucleoside-diphosphate reductase, beta subunit 1  ali model follow..  10  122....................PELNEYVAAIRHSYWIHTEFNFTSDIQDFKTGLSEVERSAIKNTMLAISQIEVAVKTF--WGDVHHRLPKPEIAAVGATFAESEVRHHDAYSHLLEILGLNEEFKELKKKPVIMKR---VHYLETSLKHAKSDDDREYTESILLFALFIEHVSLFSQFLIIMAFNKHKNMLKGISNAVEATSKEEQIHGDFGVDIINIIKKENPEWDEEHNNLIKEMCLNSFEAESKVVDWIFEKELDFLPKAVINEFLKNRFNKSLEAIGLEKLFDIDE--DDEIIGTKHGDFFVKRSINYSKRTQ 422
30 -45.8005ux2_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  16  1.............................................MTQLDFASAAYREAYSRINGVVIVGEGLANRHFQMLARRIP-----ADRDELQRLGRMEGDHASAFVGCGRNLGVVADLPLARRLFQPLHDLFKRHD-----------HDGNRAECLVIQGLIVECF-AVAAYRHYLPVAD-----AYARPITAAVMNDESEHLDYAETWLQRHFDQVKA---RVSAVVVEALPLTLAMLQSLAADMRQ---IGMDPVETLASFSELFREALESVGFEA................................. 211
31 -41.8005uxi_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  13  3........................................QLTDQSKELDFKSETYKDAYSRINAIVIEGEQEAHENYITLAQLLP-----ESHDELIRLSKMESRHKKGFEACGRNLAVTPDLQFAKEFFSGLHQNFQTAA-----------AEGKVVTCLLIQSLIIECF-AIAAYNIYIPVAD-----DFARKITEGVVKEEYSHLNFGEVWLKEHFAESK---AELELANRQNLPIVWKMLNQVEGDA---HTMAMEKDALVEDFMIQYGEALSNIGFSTIMRLSAYGLIGAP.................... 233
32 -41.3004kvr_A mol:protein length:244 Aldehyde decarbonylase  ali model follow..  14  2.......................MPTLEMPVAAVLDSTV---GSSEALPDFTSDRYKDAYSRINAIYIEGEQEAHDNYIAIGTLLP-----DHVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREFFAPLRDNFQTAL-----------GQGKTPTCLLIQALLIEAF-AISAYHTYIPVSD-----PFARKITEGVVKDEYTHLNYGEAWLKANLESCREELLEANRENLPLIRRMLDQVAG------DAAVLQMDKEDLIEDFLIAYQESLTEIGFNT................................. 231
33 -41.2004z5s_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  15  1.......................................MPELAVRTEFDYSSEIYKDAYSRINAIVIEGEQEAYSNYLQMAELLP-----EDKEELTRLAKMENRHKKGFQACGNNLQVNPDMPYAQEFFAGLHGNFQHAF-----------SEGKVVTCLLIQALIIEAF-AIAAYNIYIPVAD-----DFARKITEGVVKDEYTHLNYGEEWLKANFATAKE---ELEQANKENLPLVWKMLNQVQGDA---KVLGMEKEALVEDFMISYGEALSNIGFST................................. 217
34 -40.9004quw_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  13  1.......................................MPQLEASLELDFQSESYKDAYSRINAIVIEGEQEAFDNYNRLAEMLP-----DQRDELHKLAKMEQRHMKGFMACGKNLSVTPDMGFAQKFFERLHENFKAAA-----------AEGKVVTCLLIQSLIIECF-AIAAYNIYIPVAD-----AFARKITEGVVRDEYLHRNFGEEWLKANFDASKAELEEANRQNLPLVWLMLNEVADDARE------LGMERESLVEDFMIAYGEALENIGFTT................................. 217
35 -40.7005uwz_A mol:protein length:243 Aldehyde decarbonylase  ali model follow..  14  1.......................................MNRTAPSAALDYRSDTYRDAYSRINAIVLEGEREAHANYLTLAEMLP-----DHAEALKKLAAMENRHFKGFQSCARNLEVTPDDPFARAYFEQLDGNFQQAA-----------AEGDLTTCMVIQALIIECF-AIAAYNVYIPVAD-----AFARKVTEGVVKDEYTHLNFGQQWLKERFVTVRE---GIERANAQNLPIVWRMLNAVEADT---EVLQMDKEAIVEDFMIAYGEALGDIGFSM................................. 218
36 -39.1004pgi_A mol:protein length:250 Aldehyde decarbonylase  ali model follow..  15  14......................................DSTVGSSEALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLP-----DHVEELKRLAKMEMRHKKGFTACGKNLGVKADMDFAREFFAPLRDNFQTAL-----------GQGKTPTCLLIQALLIEAF-AISAYHTYIPVSD-----PFARKITEGVVKDEYTHLNYGEAWLKANLESCREELLEANRENLPLIRRMADQVAG------DAAVLQMDKEDLIEDFLIAYQESLTEIGFNT................................. 231
37 -36.9005k53_A mol:protein length:262 aldehyde deformylating oxygenase  ali model follow..  12  15............................TGGQQMGGSEFMPQLEASPTIDFQTETYKDAYSRINAIVIEGEQEAHDNYLTLAELLA-----DKKAELVGLSKMENRHMKGFQACGRNLKVTPDMAFAKQFFSELHKNFQTAA-----------AQGQIVTCLLIQSLIIECF-AIAAYNIYIPVAD-----DFARKITEGVVKEEYSHLNFGEVWLQAHFEESK---AELEAANRQNLPIIWKLLNAVADDA---RVLGMEKDALIEDFMIAYGEALGNIGFNN................................. 243
38 -36.4002inn_C mol:protein length:333 Phenol hydroxylase component phL  ali model follow..  10  77...................RQFYYGAYVGNRAKMQESAEFGFCEKRNLLTRLSEETQKQLLRLLVPLRHVELGANMNNAKIAGDATAT---TVSQMHIYTGMDRLGIGQYLSRIALMIDGSTGAALDESKAYWMDDEMWQPMRKLVEDTLVVDD---WFELTLVQNILIDGMMYPLVYDKMDQWFESQG--EDVSMLTEFMRDWYKESLRWTNAMMKAVAGESETNRELLQKWIDHWEPQAYEALKPLAEA--------SVGIDGLNEARAELSARLKKFELQS................................. 328
39 -35.8005k52_A mol:protein length:265 Aldehyde decarbonylase  ali model follow..  13  24....................................SEFMPQLEATAAIDYQSETYKDAYSRINAIVIEGEDEAANNYVRLAELMP-----EQSEELASLAKMEARHKKGFTACGKNLNVTPDMDFAKKFFSDLHGNFQVAA-----------AAGNIVTCLLIQALIIEAF-AISAYNVYIPHAD-----DFARKITENVVKDEYLHLNFGEQWLKANFESAKDELERANRENLAIVWRMLDEVAG------DALVLGMEKEALMEDFTIAYQEALQNIGFST................................. 243
40 -31.4004mud_A mol:protein length:235 Ring oxydation complex/ phenylacetic acid degradation related protein  ali model follow..  10  2..........................................MQKLRSVKEVPQDLTNTLVNIIELRADFELAMVEQYSPWLVNAPTV---DSRLFVAKLVSDELNHGWQLVRLLEEFKVKDV------------IERISNARLGIHKLEVSNLPLFNWEDVIAFTFLVDGAGLY-----QLKILKDCSFEP-LSTLASSMIKEEESHIFFSQNELRNYQNK-NRMQGAINFWFPRAVEMLHMTWSLNETHLRDLNISDLTKNDLINGYIKTTNEELKKCGYN.................................. 220
41 -31.4003pvr_A mol:protein length:311 Phenylacetic acid degradation protein paaA  ali model follow..  12  2............................RSTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTL---RRKAILLAKVQDEAGHGLYLYSAAETLGCARE------------DIYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGA------AIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQDAINRFWWPALMMNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMT.................................. 241
42 -30.4001mhy_D mol:protein length:521 METHANE MONOOXYGENASE HYDROXYLASE  ali model follow..  12  29...............SFNWDFKENRTKYPTKYHMANETK-DGLTRLGAGNKVHPRWGETMKVISNFLEVGEYNAIAASAMLWDSATAA---EQKNGYLAQVLDEIRHTHQCAFINHYYSKHYHDPAGHNDARRT--AIGPLWKGMKRVFADGFISGDAVECSVNLQLVGEACFTNPLIVAVTEWASANG--EITPTVFLSVETDELRHMANGYQTVVSIA-NDPASAKFLNTDLNKYFTPVLGYLFEYGSKFKVEPWVKTWNRWVSEDWGGIWIGRLGKYGVESPRSLRDAKRDAY..................... 335
43 -30.4004iit_A mol:protein length:320 Phenylacetate-CoA oxygenase subunit PaaA  ali model follow..  12  14.....................................QRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTL---RRKAILLAKVQDEAGHGLYLYSAAETLGCARE------------DLYQKMLDGQMKYSSIFNYPTLSWADIGVIGWLVDGAAIV-----NQVALCRTSYGP-YARAMVKICKEESFHQRQGFEACMALAQGNEAQRQMLQDAINRFWWPALMMNSPNSARSMAWKIKLHSNDELRQRFVDNTVPQVEILGMTNHERLAAKRKAWEEGEWVREAALAHAQKQQARSA 313
44 -29.3003dhg_A mol:protein length:500 toluene 4-monooxygenase hydroxylase alpha subunit  ali model follow..  10  1.MAMHPRKDWYELTRATNWTPERMSGHMGIPLEKWESYDKAALERAKIYENSDPGWISTLKSHYGAIAVGEYAAVTGEGRMARFSK---APGNRNMATFGMMDELRHGQLQLFFPHEYCKKDRQFDWAWRAYHSNEWAAIAAKHFFDDIITGRD---AISVAIMLTFSFETGFTNMQFLGLAADAAEAG--YTFANLISSIQTDESRHAQQGGPALQLLIENGKR--EEAQKKVDMAIWRAWRLFAVLTGPVMDYYT-QSFKEFMYEWIIGQFERSLIDLGLDKPWYWDLFLKDID..................... 325
45 -28.8003dhg_B mol:protein length:327 toluene 4-monooxygenase hydroxylase beta subunit  ali model follow..  9  76...................DQLVYRTYNLMQDGQESYVQFDQFNEREHDQMVREGWEHTMARCYSPLRYLFHCLQMSSAYVQQMAPA---STISNCCILQTADSLRWLTHTAYRTHELSLTYPDAGLGEHEREL--EKEPGWQGLRELMEKQLTAFDWGEAFVSLNLVVKPMIVESIFKPLQQQAWENN--TLLPLLIDSQLKDAERHSRWSKALVKHAL-ENPDNHAVIEGWIEKWRPLADRAAEAYLSMLSSDILPAQYLERSTSLRASILT........................................... 326
46 -28.8001t0q_B mol:protein length:330 toluene, o-xylene monooxygenase oxygenase subunit  ali model follow..  9  79...................DQLVYRTYNLLQDGQESYVQFDQLNDRGHDQMLTREWVETLARFYTPARYLFHALQMGSVYIHQIAPAS---TITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRERDV--ENDPAWQGFRELIEKALIAWDWGEAFTAINLVTKPAVEEALLQQLGSLAQSEG--TLLGLLAQAQKRDAERHRRWSSALVKMAL-EKEGNREVLQKWVAKWEPLADKAIEAYCSALP-------DGENAIVEAKSASRYVRQMMGL................................... 330
47 -27.5001fyz_A mol:protein length:527 METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN  ali model follow..  13  34...............SFNWDFKNNRTKYATKYKMANETKQDALTRLNAGVRVHPKWNETMKVVSNFLEVGEYNAIAATGMLWDSAQAA---EQKNGYLAQVLDEIRHTHQCAYVNYYFAKNGQDPAGHNDARRTRTI-GPLWKGMKRVFSDGFISGDAVECSLNLQLVGEACFTNPLIVAVTEWAAANG--EITPTVFLSIETDELRHMANGYQTVVSIA-NDPASAKYLNTDLNKYFTPVLGMLFEYGSKFKVEPWVKTWDRWVYEDWGGIWIGRLGKYGVESPRSLKDAKQDAY..................... 340
48 -27.3002inn_A mol:protein length:511 Phenol hydroxylase component phN  ali model follow..  9  9....NLKDKYQYLTRDMAWEPTYQDIFPEEKITDWDPFRFDAFAQNNGHQNISDARVNALKLFISGISPLEHAAFQGYSKVGRQFSGA---GARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLH-----DGPHMHDRVWYLSVPKSFFDDARSAGPFEFLTAISFSFEYVLTNLLFVPFMSGAAYNG--MATVTFGFSAQSDEARHMTLGLEVIKFILEQHEDNVPIVQRWIDKWFWRGFRLLSLVSMMMDYMLPNKVMSEVYYEQNGGALFKDLERYGIRPPKYQDVANDAKH..................... 329
49 -26.9001t0q_A mol:protein length:498 toluene, o-xylene monooxygenase oxygenase subunit  ali model follow..  11  1.MSMLKREDWYDLTRTTNWTELFPEEMSGARGEAWEKYDKAALERDGFVDRADPGWVSTMQLHFGAIALEEYAASTAEARMARFAKAP---GNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKAIHTNEWAAIAARSFFDDMMMTRD---SVAVSIMLTFAFETGFTNMQFLGLAADAAEAG--HTFASLISSIQTDESRHAQQGGPSLKILVENGKK--DEAQQMVDVAIWRSWKLFSVLTGPIMDYYTPLESKEFMLEWIVAQFERQLLDLGLDKPWYWDQFMQDLD..................... 325
50 -26.2001za0_A mol:protein length:275 POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE)  ali model follow..  10  15...................EPVVEANMTRDTEDIWFAHDY--FLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFIL--EDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYR--------------AEKYTQVETLVYMAFYE-----RCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAADLDVLGADIEAYRDKLQNVADAGIFGK---PQLRQLISDRITAWGLAGEPSLKQF.......................... 272
51 -24.4002jcd_A mol:protein length:345 N-OXIDASE  ali model follow..  9  34...................SATLGRLVRA-----WPADILDEWADYDTFLAAEPHQRQRVLGYNERVIATEQLIAEPAFDLVGVFPGSDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPEL------VTYRRLRRVLADMPEQWERDIAVLVWGAVAETCIN----ALLALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARNEQQRRALVRCLPIALEAFAEQDLSALLLELNA--AGIRGAEEIVGDLRSTAGGVEQLGL................................... 325
52 -23.0005hyg_A mol:protein length:317 Uncharacterized protein  ali model follow..  10  5...................NAVINRLVGNWHRRAAVKEEPDVYALFDPWERLSDETRSRLLAYNRNTVLIEQRIANPAFELVIAYPGLGGQQLELAVAQAMVDEQYHTLMHINGSAVTRRMRRSDFSDRVLPDSH-----ITTIHQEHLDRCEEPWQRSLTTLGFATVAEISIN----AYLDLLADDQEIQVVNSTTVKLHNRDEYCHASISGEMMKQVYEAPADRRRFLLEKVVAGLEAFVAPDFTTWESIVAF--EGVPGWEKAAAEVREAQGGLTEMDV................................... 295
53 -22.4003pvr_B mol:protein length:259 Phenylacetic acid degradation protein paaC  ali model follow..  7  1...................................................MGSSGSNQLTAYTLRLGDNCLVLSQRLGEWCGHAPEL---EIDLALANIGLDLLGQARNFLSYAAELAGEGDEDTL---------AFTRDERQFSNLLLVEQPNGNFA------DTIARQYFIDAWHVALFTRLMESRDPQ-LAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAINKLWRFTAELFDA-IDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLN.................................. 214
54 -21.3003per_A mol:protein length:481 Benzoyl-CoA oxygenase component B  ali model follow..  12  47....................DVYLRTAVSVDPKGWADFGYVKMHDQDVWQEVPGEYRSTLRRIIVTQGDTEPASVEQQRHLGLTAPSL---YDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREE-----GEALLERRSGDEDNPRILTAFNEKTPDWLSFFMFTFITDRDGKFQ-----LASLAESAFDP-LARTCKFMLTEEAHHLFVGESGIARVIQRTCEVMKELGTDDPAKLRAAGVIDLPTLQKYLNFGLKGRFEEEKIGDDHKLQNSEYEVMDVA.................................. 341
55 -21.1004iit_C mol:protein length:251 Phenylacetate-CoA oxygenase subunit PaaC  ali model follow..  5  2......................................................NNPNPVATYALRLGDNGLVLAQRLGAWCGHAPEL---EIDLALANIGLDLLGQARNFLSYAAELNGCGDEDTLAFGRDERQYSNLLLVEQPNGN----------------ADTIARQFFIDVWHVALYSRLVNSRDAQ-LAAIAAKGLKEVRYHLRFSRGWLERLGNGTELSNRKMQQAVDNLWRFTGELFLA-VELSLVEQGIAVDPRELQAEWQSAVHTALLDSGLQ.................................. 212
56 -19.0002uw1_A mol:protein length:338 PLASTID DELTA4 MULTIFUNCTIONAL ACYL-ACYL CARRIER PROTEIN DESATURASE  ali model follow..  13  3VTHSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYGFEEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIAEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRK--------------EKTIQYLIGSGMDIKSENSPYLGFIYTSFQE--RATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPD............................................................................................ 224
57 -18.5001oq4_A mol:protein length:363 Acyl-[acyl-carrier protein] desaturase  ali model follow..  13  33.....PPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQ--------------EKTIQYLIGSGMDPRTENSPYLGFIYTSFQE--RATFISHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPD............................................................................................ 249
58 -16.1004r42_A mol:protein length:236 Alr3090 protein  ali model follow..  9  1.......................................MVFHKKEPIHVVNIGEANPRFAQLLLEQFGGATGELSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEA---YKSTLFAVRGMGPHFLDSQGNAWTASYLNEGGDVVRDLRANIAAEAGARQTYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLGKL............................................................................................... 180
59 -15.5003sid_A mol:protein length:180 Symerythrin  ali model follow..  12  1.........................MGLNYNQED--------FMGLDRFFQDAVSHNNTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLV---------STIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQG--MEVATAFEAIVKSETKHANWVKRALENLLE................................................................................................ 178
60 -14.3004di0_A mol:protein length:144 Rubrerythrin  ali model follow..  14  3.................................................GSMAQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPFGTSRQNLQSAIAGETHEYTDMYPG------------------------------MAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGL.................................................................................................. 142
61 -14.3002oh3_A mol:protein length:167 COG1633: Uncharacterized conserved protein  ali model follow..  11  4.........................................................YTLAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDENDIHYLMT-----------PYHALRYARDNE-----IRGMEYYKEAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTPRPS.............................................................................................. 153
62 -14.0003ez0_A mol:protein length:225 uncharacterized protein with ferritin-like fold  ali model follow..  13  9....................................................TARYNRFVADLFGMMAYGELSAFERFSADARYSPTL---HDRAVLGRIAVVEFRHYELVSARLEAMGIDAE---------DAMLPFQAAVDYFHSRTRPADWYESLMKAYVIDTVSADFYRAIS-----------RYVDAGTRDVIEQIQASDE-TTEVLRERLRSALADDPRLASRLALWGRRLLGEALTQAQRVSYEHAFLGSL--LVSGLIAGLAEKHSKRMTQLGLTG................................. 225
63 -13.9001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  14  1...................................................MKDLKGTKTAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPA---------------------------TDKPIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEG--PEVAEWFETLARAEKSHAEKFQNVLKQLKG................................................................................................ 142
64 -13.6002clb_A mol:protein length:188 DPS-LIKE PROTEIN  ali model follow..  9  1.........................................MQEKPQEPKVVGVEDIKKLVDKLVKATAAEFTTYYYYTILRMHLTGMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIR------------QLADISACSDAYLPENWKDPKEILKVLLEAE---AIRTWKEVCDMTYGKD--PRTYDLAQRILQEEIEHEAWFLELLYGR.................................................................................................. 170
65 -13.1002fzf_A mol:protein length:175 hypothetical protein  ali model follow..  15  17.......................................................ADFSLEELLGMAIKAEIGARE----YKSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPVARELEKVQD-----------IIDLIRWAMKAE-----EIAAEFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLLNWE.............................................................................................. 165
66 -13.0001vjx_A mol:protein length:157 putative ferritin-like diiron-carboxylate protein TM1526  ali model follow..  14  1...................................................MGSDKIMKVSDILTVAIRLEEEGERFYRELSEHFNG----EIKKTFLELADQERIHAEIFRKMSDQENWDEVDSY--------------LAGYAFYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKDGLVNSDAQKTVKKIIDQEKEHLRKLLEMKRES.................................................................................................. 150
67 -13.0001mhy_B mol:protein length:395 METHANE MONOOXYGENASE HYDROXYLASE  ali model follow..  7  42.IQPRWKPLSEYEQLSCYAQPNPDWIAGGLDWGDWTQKFHGWGNETTDWYRHRDPAREILNKYFGALLYSEYGLFNAHSSVGRDCLSDTIRQTAVF---AALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTTDPIYSGARATVQE--GVQDWNEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDSEFGAHNRTFLNAWTEHYLASSVAALKDFVGAKVEKVAGATDSAGVSEALQRVFGDWKIDY---ADKIGFRVDVDQKVDAVLAG.......... 392
68 -13.0001fyz_C mol:protein length:389 METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN  ali model follow..  6  102...................LRRWHAPYVKDKAEEWRYTDLQGYSADGQIRAMNPTRDEFINRYWGAFLFNEYGLFNAHSQGAREALSDVTRVSLAF---WGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNGEVYKSARLAVEG--EVFDWNESAFSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDPENRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYASRIDFKAD-----------RDQIVKAVLAGLK.... 389
69 -12.4001mmo_B mol:protein length:384 METHANE MONOOXYGENASE HYDROLASE (BETA CHAIN)  ali model follow..  7  97...................LRRWHAPYVKDKAEEWRYTDLQGYSADGQIRAMNPTRTSSCNRYWGAFLFNEYGLFNAHSQGAREALSDVTRVSLAF---WGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNGEVYKSARLAVEG--EVFDWNESAFSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDPENRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYASAIDFKAD-----------RDQIVKAVLAGLK.... 384
70 -12.3002cwl_A mol:protein length:302 manganese-free pseudocatalase  ali model follow..  8  1.........................MFLRIDRLQIELPMPK-EQDPNAAAAVQAL------------RFGESTLMNYMYQSFNFRGKKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPESAPLGFAIAGGANSLVMGAMGEHWNGEYVFTS-LLHNFFLEVAARTHKLRVYEMTDNPVAREMIGYLLVRGGVHAAAYGKALESLTGVEMT............................................................................................ 205
71 -12.2004wwj_A mol:protein length:263 TENA/THI-4 family protein  ali model follow..  11  25........................QLIQDCSESKRRVVEHELYQRMRD-NKLSAKV-------MRQYLIGGWPVVEQFALYMAQNRHPGEDMARRWLMRNIRVELNHADYWVHWSRAHGVTLEDLQAQQVPPELHALSHWCWHTSSA--------DSLIVAIAATNYAIEGATGEWSALVCSNGIYAAAFPEEDRK-LKMHAQYDDAHPWEALEIIVTLAGLNPT--KALQAELRQAICKSYDYMYLFLERCMQQEKTAVTRERLAL.................................................. 260
72 -12.2002qqy_A mol:protein length:149 Sigma B operon  ali model follow..  12  5.....................................................SHDVKELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTTIP------------------------LRVKQAEDVREMLEYARQSE---TIKRYEKRKEQAANLN--TELVVKLEDMIADETNHMEELDRLLNDK.................................................................................................. 144
73 -12.2001nf4_A mol:protein length:179 bacterioferritin  ali model follow..  13  1................................................MAGNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKE-----------------------GKVVTGQAVPVIYESDADQE---TIEAYSQFLKVCKEQG--IVTARLFERIIEEEQAHLTYYENIGSHI.................................................................................................. 146
74 -12.0001jku_A mol:protein length:266 pseudocatalase  ali model follow..  12  13..................................................KPDRSDPIMARRLQESLGGQWGETTGMMSYLSQGWASTGAEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDPSLATTEHSLVHGLNASLNNPNGAAWNAGYVTSSDMRFNVVRESEARLQVSRLYSMTEDEGVRDMLKFLLARETQHQLQFMKAQEELEEKYGI............................................................................................ 198
75 -11.9003dde_A mol:protein length:239 TENA/THI-4 protein, Domain of Unknown Function with a Heme Oxygenase-like Fold  ali model follow..  9  28................................................IHEVLDGKKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPG-KYLSFCFHHAHEEAGHELMALSDIASIGFDREDVLSSKPLPATETLIAYLYWISATG-----------VQRLGYSYWAENVYGYID--VLKAIQSTLDLTPQSMKFFIAHSKIDAKHAEEVNEMLHEVCKTQED-----VDSVVAVMENSLVLTARILDDVWK............................................................... 219
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Bourne PE, Allerston CK, Krebs W, Li W, Shindyalov IN, Godzik A.,Friedberg I, Liu T, Wild D, Hwang S, Ghahramani Z, Chen L, Westbrook J. The status of structural genomics defined through the analysis of current targets and structures. Pac Symp Biocomput. 2004;:375-86.