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Query: 3khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GPHMLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKELast
1 -102.0003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model  100  1GPHMLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE 219
2 -91.9004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  98  1..............QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDKIHPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE 205
3 -91.0002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  100  2..............QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE 206
4 -71.0005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  31  1.........KEAAPLQYLRPGMVLLKKFLKHDDQVDIIRRCQKLGSGGFYTPGYRDGGKLSLQMMC---LGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPNLRPGRLNLTFRQ..... 230
5 -54.8004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  16  20.RSDYEEQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRA------EKGLYNEHTVDRAPLRNKYFFGEGYTYGAQRLYPPGDVDEIPEWVHQLVIQKLVEHRIPEGFVNSAVINDYQPGGCIVSHVD-PIHIFERPIVSVSFFSDSALCFGCKRVSEPVLSLPVRRGSVTVLSGYAADITHCIRPQD------IKERRAVIILRKTRLDA 241
6 -53.9004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  18  7........ERRDAEARRVKSGIKQ-ASIFTLEECARIEAKIDEVVAKA------DKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKSKGEVDDIPDWVHEVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVD-PIHIFERPIVSVSFFSDSALCFGCKRVSEPVLHLPVRRGSVTVLSGYAADITHCIRPQD------IKERRAVIILRKTRADA 220
7 -52.1003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  19  100........QWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTD-----------NQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGLPDICESFLEKWLR-KGYIKHKPDQMTINQYEPGQGIPAHID-THSAFEDEIVSLSLGSEIVMDFKH--PDGIAVPVMLPRRSLLVMTGESRYWTHGITCRKFDTVQAKRGLRTSFTFRKVRQTP 316
8 -51.2004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  18  5.........QKEEEARKVKSGIRQ-MRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNK------YFFGEGYTYGAQLLYPPGDVDEIPEWVHQLVIQKLVEHRIPEGFVNSAVINDYQPGGCIVSHVD-PIHIFERPIVSVSFFSDSALCFGCKRVSEPVLSLPVRRGSVTVLSGYAADITHCIRPQD------IKERRAVIILRKTRLDA 217
9 -50.3002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  16  12.GSHMRVIDREGVYEISLSPRVCLYPGFVDVKEADWILEQLC--QDVPWKQRTGIREDITYQQPRLTAWYGEL----PYTYSRITMEPNPHWHPV------LRTLKNRIEENTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGPIIASLSFGATRTFEMRKKPPPEERVKIPLDHGTLLIMEGATQDWQHRVPK-----EYHSREPRVNLTFRTVYPDP 227
10 -49.8004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  16  3......VRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELE-------------------------PELRRRRYEYDHWDAAIHGFRETEKSRWSEASMAIMRRVQAAAFGPQTLLSSVHVLDLEARGYIKPHVD-SIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYFSHEILRDEESFRRIPRGRRISVICRSLPEGM 194
11 -48.8003h8o_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  18  1........GSHSWRHIRAEGLDSSYTVLFGKAEADEIFQELKEVEYFTGALARVQVFGKWHSVPRKQATYG--DAGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHIGEHRDDCRELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKILLTK 208
12 -48.8004mgt_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  20  12.....................DSSYTVLFGKAEADEIFQELKEVEYFTGALARVQVFGKWHSVPAKQATYG--DAGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKILLG. 205
13 -48.8003rzg_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  20  14.....................DSSYTVLFGKAEADEIFQELKEVEYFTGALARVQVFGKWHSVPRKQATYG--DAGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERDLASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKILLTK 208
14 -48.5003rzm_A mol:protein length:206 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  20  12.....................DSSYTVLFGKAEADEIFQELKEVEYFTGALARVQVFGKWHSVPRKQATYG--DAGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKILLT. 205
15 -47.7004mg2_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  20  12.....................DSSYTVLFGKAEADEIFQELKEVEYFTGALARVQVAGKWHSVPRKQATYG--DAGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKI.... 202
16 -28.7003lfm_A mol:protein length:495 Protein fto  ali model follow..  9  16TPKDDEFYQQQLKYPKLILREASSVSEELHKEVQEAFLTLHK---HGCLFRDLVRIQGKDLLTPVSRILIG--NPGCTYKYLNTRLFTVPWPVKGSNGMGSSYNGQDEVDIKSRAAYNVTLLNFFGMGKMAVSWHHDENLVDRSAVYSYSCEGPEEESEDDSHLEGRGLAIPLHQGDCYFMLDDLNTHQHCVLA---------SQPRFSSTHRVAECST 312
17 -17.9003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  13  1.......MGSDKIENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWID-------------------GNQTSGAMATTRKRNQQLDKDDPVAVALGQQIDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDPDGMIRTDLSATLFLGGELVI-----QDTYGQQSIKLSAGSLVLYPSSS---LHQV-------TPVLSGERTAAF........ 184
18 -17.4005iqs_A mol:protein length:315 WelO5  ali model follow..  10  8.PTTENLYFQGSMSNNTVSTDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIYGHAIVGQSPDLKDYFASSAIFRQACRTMFQGSPDFEEQVESIFH-EGQTYTPATIRLLLEGREIAVHVGNDFLLMPSDQLSYFIGELVVYSLEWNPQEAQSVAYAPGPGDMLLFNG--GRYYHRVSEVIGN------SPRRTIG........ 292
19 -14.8006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  11  36HPEFLSHLQNFKDFDYTEICNDVYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYV----------VFNYVAPFVRHLYNNYKTKDINLAFVVKYDMERQSELAPHHDSSTYTLNIALNEYG-AGGCEF------IRHKFIWQGQKVGYATIHAGKLLA-YHRA-------LPITSGKRYILV........ 225
20 -14.5004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  15  37....................GWSQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATQEVRE------------TIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQFLGLEDFECHFALYPPGAFYRRHLDRFRDDDRRMVSAVLYGQLRMF-----LADGVEHDVEPVAGCLVVF--LSGEVPHEVLPAGRE--------RLSLT........ 212
21 -13.9002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  12  32....................GICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI---------GDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 213
22 -13.8002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  9  13.DCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMEGLVALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFWNN--------PSTIKVFEQVFPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIGPNQDFRTFWIGGVALADGSHRSEDEHLLHSPMEPGDILLFHAHM---CHK---SIPNLSKDPRLMRMSMDTRVQPAKS 255
23 -13.4003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  10  54....................NWGTIHELVNDDLLRAVRKEIETEIHFTKKETDI---------------YRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKFGYVTKAGKLSGSKTDMNTYTKGCHLLTHDDVIGSRRISFILYLPDGGLRLFP-PNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVD------KHRLSIQYHIPQVGE 252
24 -13.3004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  12  25....................GICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI---------GDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 206
25 -13.2003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  9  20.....HMTIAAAIHALDADEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATSVTLGQLQREQGDKLVSKFGIACRVNDGLRTTRFVRLFSDALDAKPLTIGHDYEVEFLLATRRVYEPFEAFAPHCDDVSYGRDTVQLGGFLAGMVMWDNRPESRAAAKIMLKPQPGQLTLFQSKN---LHAIERC--------TSTRRTMGL....... 260
26 -12.9002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  12  27....................GICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI---------GDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 208
27 -12.8002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  13  21....................GICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRG---------KITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 202
28 -12.8004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  11  51....................NWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMS--------INTYTKGCHLLTHDDVIGSRRISFILYLPDGGLRLFP-PNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVD------KHRLSIQYHIPQVGE 249
29 -12.7003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  10  35....................NWGTIHELVNDDLLRAVRKEIETEIHFTKKETDI---------------YRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKFGYVTKAGKLSGSKTDMNTYTKGCHLLTHDDVIGSRRISFILYLPDGGLRLFP-PNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVD------KHRLSIQYHIPQVGE 233
30 -12.7005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  13  32....................GICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRG---------KITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRAMVACYPGNGTGYVRHVDNCNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 213
31 -12.4005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  12  32....................GICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIR--------GDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 213
32 -12.1005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  10  8.PSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSI---------GDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRN-PHEVKPAYAT--------RYAIT........ 208
33 -12.0005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  7  17......GFETSDRPGVCDGKYYEKIDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDP-------------KSRNSEQTWFMPGEHEVIDKIQKKTREFLSKKHCIDKYNFEDVQVARYKPGQYYYHHYDDDACPKDQRLATLMVGGETDF-------PTLKTKIKPKKGTSIFFWVADPVTRKLYKETLHAGLPVKSGEKIIANIRA..... 220
34 -12.0002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  12  11.......EWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKAR--PKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGED------------------SVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGLTTVEEGGETVLPNAEQKVTGDGLAVKPIKGDALMFGSNDPASLHG-------SCPTLKGDKWSAT........ 215
35 -12.0001vrb_A mol:protein length:342 Putative asparaginyl hydroxylase  ali model follow..  7  20SPVTMSEFLEEPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQV----RRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYT------NLIFQIQGEKTWKLAKNENVSNPMQVNLTPGTMLYL---PRGLWHSTKSDQATLA-------LNITFGQPAWLD 252
36 -12.0006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  12  55....................GFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIR----------GDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTMVACYPGSGLGYIRHIDNPNRDGRCVTVLYYLNPNGGQLWLYPNNENKVVKIDPIFDRLLLFWSDRRN-PHEVKPAYAM--------RYAIT........ 234
37 -11.8004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  9  91......LKNVRTAYFVCDHDGLAYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTA--------DLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCHRIRKPHKDNLDITPS---SLFYFGN--QNTEGYLELTDKNCKVFVQPGDVLFFKG--NEYKHVVANITS-------GWRIGLVY....... 294
38 -11.8002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  10  8.....SLFATR-----------LYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYP------GYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPLRTFRSVAPKVGDVLLWES---WLRHEVPMNMAE------EDRISVSFNYAWGEG 210
39 -11.8003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  11  1..MSLSLFVTR----------HAPLSDHGPAIDAEEMESSCYAIAEDD---------EAGQGWCEENGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGRALELEDLWINILPEGGSHASHIHPHSVISGTTYVSMPGGTSALKLEDPRDELRQFIYVTPAVGDVLLWES---WLRHEVPMNMSE------DDRISVSFNYRWAE. 205
40 -11.8004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  11  135...................................................................................................EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLV-GTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKS-----RLSIS........ 248
41 -11.6005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  11  28.......DREIQIISKFEEPLIVVLGNVLSDEECDELIELSK-------------------------SKLARSKVGSSRDVNDIRTSSGAFLDD--ELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDHSRSAANNRISTLVMGGETFF-------PKLNLSVHPRKGMAVYFQSLNELTLHG-------GAPVTKGEKWIAT........ 208
42 -11.2004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  16  10.PQLQRLAADADVDRMC-EDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADKYPPHFKYVPNV--------ATTCPTFRNTVLINPVIHAICEAYFQRTGD------YWLSAAFLREIESGMPAQPHRDDHYQPLEAPPVSLSVGATEVILGSHRPERDQAVLATMDPGDVLIVRQRV---VHAGGGNRTTAGKPRRVVLAYFNSVQLTPFE 237
43 -11.0002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  10  24TLEQRKFYEE---------NGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMH------TMLINKPPDSGKKTSRHPLHEHISRNNGCLVVLPGTHKGSLKPHDYENKARVHLVMEKGDTVFFHPLL---IHGSGQNKTQ------GFRKAISCHFASAD. 256
44 -11.0004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  10  2..TTATLDRAAAIERFR-RDGFANAGPVLAPDAIARLKAGAERLITRF-TDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLHREELAQLAAAFVDGPVVPTA------YALVLKEPYRAAEVPWHRDRDDAGPHNGCLEAVPGSHLLPDDAEVAATGPVVPVPVSQGDVVVHDVRL---VHGSGPNANG------SWRRTIVIEYADPA. 218
45 -10.9004xab_A mol:protein length:252 EvdO2  ali model follow..  11  11DHRDREEFRS---------RGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPL------LPQIIKPEKYVPELLDSPHFARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHQDEDEATVESGCLHYLPGGHRGPVLPHHHDPTSAVACPLAPGGAVVHDFRT---PHYAGPNLTD------QPRRAYVLVFMSAP. 237
46 -10.9004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  13  35..................EDGVAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLADFIPDHVARVHNLVDFSHCFRH------HELLHKICRLTFEES--GDYWLGYGAVIENGPGTTQKWHRDQTDFDAETGKTQYILGSNKRVELGEPDADHPIEYVGLKPGDTTIVSGKI---THRGSDNRSD------KMRRAMPI....... 239
47 -10.7004xbz_A mol:protein length:334 EvdO1  ali model follow..  7  39LPEHVTAFRR---------QGVLVVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGH---PLLLRIMEQLVGPNLIPTW------DSMVFKTPAGAPRLAWHRDAVGVTGAGRVIDAGINCVWCIPESNYWDTTGAVPAVMQPGDLLLHNILT---LHG-------APAVVGKQRRVIYFEYRPAE. 259
48 -10.5005epa_A mol:protein length:279 SnoK  ali model follow..  9  19SKEAVRFYRE---------QGYVHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQAWQ-----------KHPELRSLVLHPEISGIALRLAGAPLRVYS------SDILVKEPKRTLPTLVHDDETDVPVERGCMSYVPGSHLRAREDRQEPWQPRVAVPVRAGDVVFHHCRT---VHMAEANTSD------SVRMAHGVVYMDAD. 237
49 -10.5004csw_A mol:protein length:406 CUPIN 4 FAMILY PROTEIN  ali model follow..  11  19GGLAPEEFLANQKRPLLIRQALPGFRSPITPEELAGLACEEGVTARLILEKGGAYPWEVRYGPFEPEDFVALPPTHWTLLVQE-----------VDRLVPEVAALLETVRFVPNWRLDDIMVSYAPEGGTVGAHIDNYD------VFLVQAWGRRRWQINHRPVEEPDAEWILEPGDVLYL---PPRIPHYGVALEDCMT-------FSIGFRAPDQAE 228
50 -10.3003nnf_A mol:protein length:344 CurA  ali model follow..  12  16.SNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQ---------------EKLALLNYITGKNLMIMHNALFSVEPNHKGLPWHVGVGSFSFTKPLDKITKEHRGGMQY-DYTIKDGYEEDEYNLGDAFFFNK---YVLHQSVPLKPGLH----KLRRAFVIRLVDYD. 270
51 -10.3005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  15  37..................EDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKRF-------------SKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGMGYHFNDTMVIEVQPGAPQRLHRDQEGPDAPECLVNFFCGATRLVPGSNRYGKIDSVPAIMQPGDCYMMSGKV---IHG-----AGHNATLSDQRRALAF....... 241
52 -10.2005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  11  10.PTLRRIPRSAGDEAIF-EDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMND-------------ELLHGLCKRLFGPESGDYWLTTSSVLETEPGYHGQELHREHDTLGRQSPESMLNFGATRVLPGSHLPKADTAIPAVMNPGDAVLFTGKT---LHGAGKNNTTDFL-----RRGFPL....... 227
53 -10.0004diq_A mol:protein length:489 Lysine-specific demethylase NO66  ali model follow..  13  52APMPPDHFYRRLWEREAV-----YYQGLFSTADLDSMLRNEEVQFGQHLDAARYINGRRETLNPPGRALPAAAWSLYQAGCSLRLLCPQAFSTTVWQFLAVLQEQFGSMAG----------SNVYPNSQGFAPHYDDIE------AFVLQLEGRKLWRVYRPRAPEPVLQTVLEPGDLLYF---PRGFIHQAECQDGVHS-------LHLTLS...... 262
54 -9.9904y4r_A mol:protein length:454 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66  ali model follow..  11  36APMPPDHFYRRLWEREAV-----YYQGLFSTADLDSMLRNEEVQFGQHLDAARYINGRRETLNPPGRALPAAAWSLYQAGCSLRLLCPQAFSTTVWQFLAVL-------QEQFGSMAGSNVYLTPPNSQGFAPHYDDIE------AFVLQLEGRKLWRVYRPRVPEPVLQTVLEPGDLLYF---PRGFIHQAECQDGVHS-------LHLTLS...... 246
55 -9.9302xdv_A mol:protein length:442 MYC-INDUCED NUCLEAR ANTIGEN  ali model follow..  12  24SPIKTETFFKEFWEQKPLPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKL-------ECYFGSLVGSNVYITPAGSQGLPPHYDDVE------VFILQLEGEKHWRLYHPTVPRPVHEFMLKPGDLLYF---PRGTIHQADTPAGLAHS------THVTIS...... 234
56 -9.8602opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  11  5SPSQLQKFQQ---------DGFLVLEGFLSAEECVAMQQRIGEIVPLHCRTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFFKVQTLARSLGLQMPVVVQ------SMYIFKQPHFGGEVSPHQDAEDATLENGCLWFIPGSHTSGVSRRMVDNSLFVPTPVQRGALVLIHGEV---VHKSKQNLSD------RSRQAYTFHLMEAS. 268
57 -9.7805ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  9  18.PAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENKEKDASVPTADAFAFPFSTAGTALTAWVALVDVPVERGCMTFVPGSHLL-FTRPGEIWMPRVTVPLRAGDCTFHHART---VHSAGANSTD------EPRLSTSAVYMDAT. 240
58 -9.7505ybm_A mol:protein length:314 PrhA  ali model follow..  11  37..................EDGCVVIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKRF-------------SKCVIASPTFRNEIIESDLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPQRLHRDQEGPAGPECVINFFCGATRLVPGSHLFGKIETVPAIMQPGDCYLMSGKV---IHGAGHNATTTDR-----RRALALAIIRR.. 246
59 -9.7105y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  16  9KSQIPRLSAINDLHKIW-EHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLSTTTRLVN---APISKAYREDVLN--------SKVLHRICSDAFHVYG--DYWVLMGAVMELAPSNPQPLHRDMEYLKPDAPATSINFGATHVILGSHKVSMDATVRALMNPGDALLITDST---IHCGGAETTGTET-----RRLLTI....... 229
60 -9.6404nub_A mol:protein length:384 50S ribosomal protein L16 arginine hydroxylase  ali model follow..  13  5LTLNWPDFLERQKRPVVLKRGFNNFIDPISPDELAGLAME----SEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQA-----------VNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYD------VFIIQGTGRRRWRVGAALQMEAIIDEELEPGDILYI---PPGFPHEGYALENAMN-------YSVGFRAPNTRE 209
61 -9.6404lit_A mol:protein length:407 50S ribosomal protein L16 arginine hydroxylase  ali model follow..  13  33LTLNWPDFLERQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRL-----SHQDGKWQVSHGPFESYDHLGETNWSLLVQA-----------VNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYD------VFIIQGTGRRRWRVGEKLQMEAIIDEELEPGDILYI---PPGFPHEGYALENAMN-------YSVGFRAPNTRE 237
62 -9.6206EC3 Entity 1(prereleased)  ali follow..  10  250.GAQIRRFRE---------DGFVNAGPVFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLFR---PELAELAAAFVGSPVVPTA------FALVLKEPKRAAGVPWHRDRDTAGPENGCLEGVPGSHLLPDDIDVPDGGPRVPVPSKVGDVIVHDV---RLVHGSGPNPSD------QWRRTIVIEFANPA. 457
63 -9.6105zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  10  36..................EDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHM-----------GDLVLTSKTYRDEL-PFAHEVLEKVFKKDSGDYWLNMGNILNMLPGAEAQRPHRDDHMDPATSPDLMINIGGTLLLPKSHTANAEDLPAAEMQVGDALIFTGKC---VHGGGANRSD------KPRIGLAL....... 236
64 -9.3104p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  13  24................................DQRRLTDDLAVLAKSNFSSEYSDFACGRWEFCMLRNQSGKQEEQRVVVHETPALATPQSLPYLNELLDNHFDRD---------SIRYARIIRISENACIIPHRDYLELEGKFIRVHLVLNEKCSNTEENNI-------FHMGRGEIWFLDASLP---HSAGCFSP-------TPRLHLVV....... 181
65 -9.1704xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  10  8TREQLYIFDT---------TGFLVIPGVFGSGEVESFRSELERLDTVDPGFPRTRRYPDLPAASPVFARL----------------------DRLLAPVRDVVNQPLRLLEGYGLRRTKDSVLYLHGGNDRQVGRDLSDGKLYCPYVKALVGSFCYVQGSHKAGFPTLSDVFVRSGDVLLLNEAL---MHGTRRKLTE------GDRLLTAFG...... 226
66 -9.1003al5_A mol:protein length:338 JmjC domain-containing protein C2orf60  ali model follow..  15  137.............................................................................................DIRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMDN-----LLIQVTGKKRVVLFSPRDSKARRYECSLEAGDVLFI---PALWFHNVISEEFGVG-------VNIFWKHL.... 270
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.