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Query: 3q4o_A mol:protein length:196 Uncharacterized protein MJ0754, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMQPISEEEKEGLIEMREEEKLARDVYLTLYNKWKLQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISKEEYEEIISSSTERGMNRLast
1 -80.6003q4o_A mol:protein length:196 Uncharacterized protein MJ0754  ali model  100  1MGSSSSGLVPRGSHMQPISEEEKEGLIEMREEEKLARDVYLTLYNKWKLQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISKEEYEEIISSSTERGMNR 190
2 -74.6003q4n_A mol:protein length:193 Uncharacterized protein MJ0754  ali model follow..  97  6..........SSLPKQPISEEEKEGLIEMREEEKLARDVYLTLYNKWKLQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISKEEYEEIISSSTERGMNR 185
3 -46.8002fzf_A mol:protein length:175 hypothetical protein  ali model follow..  15  18..................DFSLEELLGMAIKAEIGAREFYKSLAEKIKIEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGP----ELQPVARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLLNW--EMYSQMMHIG............. 174
4 -46.4001vjx_A mol:protein length:157 putative ferritin-like diiron-carboxylate protein TM1526  ali model follow..  12  8....................KVSDILTVAIRLEEEGERFYRELSEHFNKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAG--YAFYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKDGLVNSDAQKTVKKIIDQEKEHLRKLLEMKREST........................... 151
5 -45.4002oh3_A mol:protein length:167 COG1633: Uncharacterized conserved protein  ali model follow..  12  2.................MGYTLAEFLAHAIALETEAAERYVELADMMEATVFRDMARFSTLHGDEIKQRSRALELPKL----MSWQYRWKTPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTPRP......................... 152
6 -36.0004r42_A mol:protein length:236 Alr3090 protein  ali model follow..  15  11...........VVNIGEANPRFAQLLLEQFTGELSAALQYWVQSFHVEKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEAYKSTLFLDSQGNAWTASYLNEGGDVVRDLRANIAAEAGARQTYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLGKL......................... 180
7 -31.7003sid_A mol:protein length:180 Symerythrin  ali model follow..  16  23..................HNNTDANAASSIEVEMECDCMYPTFAEIARRAMFDAIAKEEGMHAQLLTKLYSELEVKDSAET--LEAKRLVSTIESQIDAVASDSRGLRRALETALEVETIESQAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLE.......................... 178
8 -27.9002e0z_A mol:protein length:345 Virus-like particle  ali model follow..  14  17..................KEELMEILRLAIIAELDAINLYEQMARYSERKILLDVAREEKAHVGEFMALLLNLDPEQVTELKGGFEEVKELTAHINDNKKEESNVEYFEKLRSALLDGVNKGRSLLKHLPVTRIEGQSFRVDIIKFEDGVRVVKQE.................................. 161
9 -26.7002clb_A mol:protein length:188 DPS-LIKE PROTEIN  ali model follow..  12  23..................IKKLVDKLVKATAAEFTTYYYYTILRMHLTKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQ------ADISACSDAYLPENWKDPKEILKVLLEAEQCAIRTWKEVCDMTYGKDTYDLAQRILQEEIEHEAWFLELLYGRP........................... 171
10 -26.3004di0_A mol:protein length:144 Rubrerythrin  ali model follow..  18  10..................GSKTEENLKYAFAGESQANRRYLYFASKADVALFRSTAEGETGHAHGHLEYLEAVGDPAT---------------------GLPFGTSRQNLQSAIAGETHEYTDMYPGMAKTARFEEIANWFETLAKAERSHANRYTKALDGLVD.......................... 144
11 -25.9002hz8_A mol:protein length:115 De novo designed diiron protein  ali model follow..  12  2.........................................................DELRELLKAEQQAIKI------------------YKEVLKKAKEGDEQELARLIQEIVKAEKQAVKVYKEAAEKARNPEKRQVIDKILEDEEKHIEWLKAASKQGNAE......................... 91
12 -25.7005n5e_e mol:protein length:99 PFC_05175  ali model follow..  12  19........................................................................................................EELMEILRLAIIAELDAINLYEQMARYSEDENVRKILLDVAREEKAHVGEFMALLLNLDPEQVTELKGGFEEVKELTG........ 96
13 -25.4002qqy_A mol:protein length:149 Sigma B operon  ali model follow..  18  1...........SNAMSHDVKELIEGLNEDLAGEYSAIIMYNHNAATVSGPFFESEISDEQGHALYLAEKIKTLG------------------TPTTIPLRVKQAEDVREMLEYARQSEYETIKRYEKRKEQAAMTELVVKLEDMIADETNHMEELDRLLNDKA........................... 145
14 -25.2001za0_A mol:protein length:275 POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE)  ali model follow..  10  55...........DPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFILEWLGRWTAEEHLHAIALREYLVVTREVDP-------VANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHC............................ 203
15 -25.0001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  16  6..................GTKTAENLKQGFIGESMANRRYLYFAKRADEGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKPIG--------------------TLEQMIESAIAGETQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQLKG.......................... 142
16 -24.8002ib0_A mol:protein length:170 CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN  ali model follow..  12  1MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQ---------------SSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLG.............................. 149
17 -24.8003fvb_A mol:protein length:182 Bacterioferritin  ali model follow..  13  1MAMGTLEAQTQGPGSMKGEPKVIERLNEALFLELGAVNQYWLHYRLLNDKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSP----------------LRIGQNVKEVLEADLKGEYDARASYKESCDKLGDYVSKQLFDELLADEEGHIDFLETQLDLLA........................... 157
18 -24.3001nf4_A mol:protein length:179 bacterioferritin  ali model follow..  11  6...............EDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGK----------------VVTGQAVPVIYESDADQEDATIEAYSQFCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIK........................... 147
19 -24.1005uxi_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  12  1MQQLTDQSKELDFKSETYKDAYSRINAIVIEGEQEAHENYITLAQLLPEDELIRLSKMESRHKKGFEACGRNLAVTPDLQFAKEFFSGLHQN-----QTAAAEGKVVTCLLIQSLIIECFAIAAYNIYIPVA-DDFARKITEGVVKEEYSHLNFGEVWLKEHFAE......................... 162
20 -24.0005xx9_A mol:protein length:167 Bacterioferritin  ali model follow..  13  2................QGDPEVIEFLNEQLTAELTAINQYFLHAKLQDHKYTRAESFDEMRHAEVLTDRILLLDGLPNYQRLFH----------------VRVGQSVTEMFQADREVELEAIDRLRRGIEVMRDITSANVFEAILADEEHHIDYLETQLDLIEKLGESLYLSTV................ 153
21 -23.9002wtl_A mol:protein length:173 BACTERIOFERRITIN  ali model follow..  10  1...........ASGSMQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGS----------------LRIGQTLREQFEADLAIEYDVLNRLKPGCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDELYSAQCVSRPPTSAWSHPQFEK.... 173
22 -23.6005uwz_A mol:protein length:243 Aldehyde decarbonylase  ali model follow..  13  1MNRTAPSSAALDYRSDTYRDAYSRINAIVLEGEREAHANYLTLAEMLPDEALKKLAAMENRHFKGFQSCARNLEVTPDDPFARAYFEQLDGN-----QQAAAEGDLTTCMVIQALIIECFAIAAYNVYIPVA-DAFARKVTEGVVKDEYTHLNFGQQWLKER............................ 159
23 -23.4003gvy_A mol:protein length:161 Bacterioferritin  ali model follow..  12  2................QGDAKVIEYLNAALRSELTAVSQYWLHYRLQEDHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNP----------------LRIGQTLRETLDADLAAEHDARTLYIEACEKVRDYPSKMLFEELIADEEGHIDYLETQIDLMG........................... 142
24 -23.4001jgc_A mol:protein length:161 bacterioferritin  ali model follow..  10  2................KGDAKVIEFLNAALRSELTAISQYWVHFRLQEDKKSREESIEEMGHADKIIARILFLEGHPNLQKLDP----------------LRIGEGPRETLECDLAGEHDALKLYREACAEVGDIVSKNIFESLITDEEGHVDFLETQISLYD........................... 142
25 -23.4003bkn_A mol:protein length:161 Bacterioferritin  ali model follow..  10  2................QGDPDVLKLLNEQLTSELTAINQYFLHSKMQDNEHTRAESFEEMRHAETITDRILLLDGLPNYQRLFS----------------LRVGQTLREQFEADLAIEYEVLERLKPGCREKQDATSARLLEQILADEETHIDYLETQLQLMDALYAAQCVSRP................ 157
26 -23.3005zur_A mol:protein length:158 Bacterioferritin  ali model follow..  7  2................KGDKTVIQFLNKQLTNELTAINQYFLHARMLNHKHEYEESIGEMKHADRLIARIFMLDGLPNLQDLHK----------------LLIGEDVPELLACDLKLEQAAHATVREACESVRDYVSRDLFQDILDDTEEHIDYLETQIDLIDKVGLQNYLQSQ................ 153
27 -23.2004tof_A mol:protein length:158 Bacterioferritin  ali model follow..  10  2................KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGK----------------LLIGENTQEMLQSDLNLELCATKDLREACEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQENYLQSHMHEDD............... 158
28 -23.1005d8x_A mol:protein length:158 Ferroxidase  ali model follow..  10  2................KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDAHEYHESIDEMKHADKLIERILFLEGAPNLQDLGK----------------LLIGANTQEMLQCDLNLELKATKDLREACEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQENYLQSHMHEDD............... 158
29 -23.1004quw_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  15  16................SYKDAYSRINAIVIEGEQEAFDNYNRLAEMLPDDELHKLAKMEQRHMKGFMACGKNLSVTPDMGFAQKFFERLHEN-----KAAAAEGKVVTCLLIQSLIIECFAIAAYNIYIPVA-DAFARKITEGVVRDEYLHRNFGEEWLKANFDA......................... 161
30 -23.0004am2_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  13  2................KGDQKVIEYLNRGLRSELTAVSQYWLHYRMLEDKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDP----------------LRIGQTVKEVLESDLAAEREARALYQEGAASVGDFPSKNLFEELMGDEEHHIDFLETQLDLVSELYAQHHIGKLD............... 158
31 -23.0003is7_A mol:protein length:158 Bacterioferritin  ali model follow..  10  2................KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGK----------------LLIGENTQEMLQCDLNLELKATKDLREACEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQENYLQSHMHEDD............... 158
32 -23.0005k53_A mol:protein length:262 aldehyde deformylating oxygenase  ali model follow..  15  42................TYKDAYSRINAIVIEGEQEAHDNYLTLAELLADK-LVGLSKMENRHMKGFQACGRNLKVTPDMAFAKQFFSELHKN-----QTAAAQGQIVTCLLIQSLIIECFAIAAYNIYIPVA-DDFARKITEGVVKEEYSHLNFGEVWLQAHFEE......................... 187
33 -22.8004z5s_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  13  16................IYKDAYSRINAIVIEGEQEAYSNYLQMAELLPEEELTRLAKMENRHKKGFQACGNNLQVNPDMPYAQEFFAGLHGN-----QHAFSEGKVVTCLLIQALIIEAFAIAAYNIYIPVA-DDFARKITEGVVKDEYTHLNYGEEWLKANFAT......................... 161
34 -22.6003qb9_A mol:protein length:174 Bacterioferritin  ali model follow..  9  4................QGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGS----------------LRIGQTLREQFEADLAIEYDVLNRLKPGCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMD........................... 144
35 -22.4001bcf_A mol:protein length:158 BACTERIOFERRITIN  ali model follow..  10  2................KGDTKVINYLNKLLGNELVAINQYFLHARMFKNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGK----------------LNIGEDVEEMLRSDLALELDGAKNLREAADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQQNYLQAQIREE................ 157
36 -22.4004pgi_A mol:protein length:250 Aldehyde decarbonylase  ali model follow..  13  30................RYKDAYSRINAIVIEGEQEAHDNYIAIGTLLPDEELKRLAKMEMRHKKGFTACGKNLGVKADMDFAREFFAPLRDN-----QTALGQGKTPTCLLIQALLIEAFAISAYHTYIPVS-DPFARKITEGVVKDEYTHLNYGEAWLKANLES......................... 175
37 -22.4004kvr_A mol:protein length:244 Aldehyde decarbonylase  ali model follow..  13  30................RYKDAYSRINAIYIEGEQEAHDNYIAIGTLLPDEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREFFAPLRDN-----QTALGQGKTPTCLLIQALLIEAFAISAYHTYIPVS-DPFARKITEGVVKDEYTHLNYGEAWLKAN............................ 172
38 -22.3001sof_A mol:protein length:156 Bacterioferritin  ali model follow..  10  2................KGDKIVIQHLNKILGNELIAINQYFLHARMYEDKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGK----------------LLIGEHTKEMLECDLKLEQAGLPDLKAAIAYCEDYASRELLEDILESEEDHIDWLETQLDLIDENYLQSQMDE................. 156
39 -22.2001jku_A mol:protein length:266 pseudocatalase  ali model follow..  10  12............AKPDRSDPIMARRLQESLWGETTGMMSYLSQGWASTKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMTEDEGVRDMLKFLLARETQHQLQFMKAQEELEEKYGII-FSDGDGSKAFEGQVAKDGEK 238
40 -22.2003e2c_A mol:protein length:158 Bacterioferritin  ali model follow..  11  2................KGDTKVINYLNKLLGNELVAINQYFLHARMFKNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGK----------------LNIGEDVEEMLRSDLALELDGAKNLREAADSVHDYVSRDMMIEILRDERGHIDWLRTELDLIQQNYLQAQIREE................ 157
41 -22.1004cvp_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  10  3................KGDTKVINYLNKLLGNELVAINQYFLHARMFKNDVEYRESIDEMKHADRYIERILFLEGLPNLQDLGK----------------LNIGEDVEEMLRSDLALELDGAKNLREAADSVRDYVSRDMMIEILRDEEGHIDWLETELDLIQQNYLQAQIREE................ 158
42 -21.8001yux_A mol:protein length:202 Nigerythrin  ali model follow..  11  26..................VGSTLENLKAAIAGETGAHAKYTAFAKAARERLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAA----------------PSAYSCDLNLISGANGEIYETSDMYPAFIRKAQNSKAVHVFTRAKLAESVHAERYLAAYNDI............................ 163
43 -21.6002vzb_A mol:protein length:170 PUTATIVE BACTERIOFERRITIN-RELATED PROTEIN  ali model follow..  14  15..................VKSLIDQLNAALSEEWLAYYQYWVGALVVEQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELAR--------KYDSPTAFDSVSLLNQNVSSERCAILRYQEIANFTNGKDTCDIAKHILAEEEEHEQDLQDYLTDIA........................... 161
44 -21.3003r2h_A mol:protein length:154 Bacterioferritin  ali model follow..  13  2................QGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDERLNHEMEEETQHADALLRRILLLE------------------TPRMRPDDIHPGTTVPEMLEADLKLERHVRAALAKGCEQHKDFVSRDILKALADTEEDHAYWLEQQLGLIARMGLENYLQSQ................ 153
45 -21.2002cwl_A mol:protein length:302 manganese-free pseudocatalase  ali model follow..  13  19..................DPNAAAAVQALLFGEMSTLMNYMYQSFNFRYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPESAPLGFWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMTDNPVAREMIGYLLVRGGVHAAAYGKALESLTGVEMTKMLPIPKID............. 214
46 -20.8003k6c_A mol:protein length:95 Uncharacterized protein NE0167  ali model follow..  5  16.......................................................................................................ETRDMHRAIISLREELEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRCDPAFDKEL.................... 82
47 -20.6005k52_A mol:protein length:265 Aldehyde decarbonylase  ali model follow..  13  44..................KDAYSRINAIVIEGEDEAANNYVRLAELMPEEELASLAKMEARHKKGFTACGKNLNVTPDMDFAKKFFSDLHGN-----QVAAAAGNIVTCLLIQALIIEAFAISAYNVYIPHA-DDFARKITENVVKDEYLHLNFGEQWLKANFES......................... 187
48 -20.0001mft_A mol:protein length:53 Four-helix bundle model  ali model follow..  15  1...........................................................................................................MDYLRELYKLEQQAMKLYREASEKARNPEKKSVLQKILEDEEKHIEWLETIN............................... 52
49 -19.7001b71_A mol:protein length:191 PROTEIN (RUBRERYTHRIN)  ali model follow..  13  6..................GSRTEKNILTAFAGESQARNRYNYFGGQAKKDIFAETADQEREHAKRLFKFLEGGDLEIVAAFPA-----------------GIIADTHANLIASAAGEHHEYTEMYPSFARIARYEEIARVFASIAVAEEFHEKRFLDFARNIKE.......................... 144
50 -19.4005ux2_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  10  10................AYREAYSRINGVVIVGEGLANRHFQMLARRIPADELQRLGRMEGDHASAFVGCGRNLGVVADLPLARRLFQPLHDL-----KRHDHDGNRAECLVIQGLIVECFAVAAYRHYLPVA-DAYARPITAAVMNDESEHLDYAETWLQRHFDQ......................... 155
51 -19.2005da5_A mol:protein length:116 Rru_A0973  ali model follow..  7  16.....................................................................................................KEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILAHNRDEEKEHAAMTLEWLRRNDAKWAEHL.................... 84
52 -18.8004etr_A mol:protein length:153 Putative uncharacterized protein  ali model follow..  10  9..................LDDTLDVLNDLLQTSKDGEAGFHACAEDLRDPAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLH----RRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDARA........................... 153
53 -18.5005ux1_A mol:protein length:237 tRNA-(MS(2)IO(6)A)-hydroxylase-like  ali model follow..  13  35..............VEQANAHPMEVLIDHAHCERKAAGAAVQMMFRYLCEPLSPLAREELEHFEQVLALIKARGRY------LEPLPSPGYGADLARQIRKGEPQRMLDSFLVAGLIEARSHERMALLAEHSPDPQLRELYSDLLASEARHFGLY-----VLCEQRYPRELIVERLEVLALAEVK..... 200
54 -18.2005n5f_A mol:protein length:98 encapsulated ferritin  ali model follow..  8  17.......................................................................................................ETKNMHRALVTLIEELEAVDWYQQRADACSEPGLHDVLIHNKNEEVEHAMMTLEWIRRRSPVFDAHMRTYLFTERPILELEE..... 98
55 -17.3005l8f_A mol:protein length:116 Rru_A0973  ali model follow..  4  16.....................................................................................................KEETVNRHRAIVSVMEALEAVDWYDQRVDASTDPELTAILAHNRDEAKEAAAMTLEWLRRNDAKWAEHL.................... 84
56 -17.3003oj5_A mol:protein length:189 Ferritin family protein  ali model follow..  8  2............TEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQ----------------DRPREALALALDQERDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFVAR............ 162
57 -17.2001oq4_A mol:protein length:363 Acyl-[acyl-carrier protein] desaturase  ali model follow..  8  84...........RERAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVR-TRAWTAEENRHGDLLNKYLYLSGRVDMRQ------IEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGRQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKL............................ 243
58 -17.1002uw1_A mol:protein length:338 PLASTID DELTA4 MULTIFUNCTIONAL ACYL-ACYL CARRIER PROTEIN DESATURASE  ali model follow..  9  59...........RERAKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKWTRAWTAEENRHGDLLNKYLYLSGRVDM------RKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIA................. 229
59 -16.4005u1b_A mol:protein length:189 MtrE protein,Ferritin chimera  ali model follow..  12  24.................LSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTLFLFDHAAEEYEHAKKLIVFLNENNVPVQLTS----------------SAPEHKFEGLTQIFQKAYEHEQESINNIVDHAIKSKDHATFNFLQWYVSEQHEEEVLFKDILDKIE........................... 164
60 -16.4002itb_A mol:protein length:206 TRNA-(Ms(2)io(6)a)-hydroxylase, putative  ali model follow..  20  26...................ADQETLLIDHKNCEFKAASTALSLIAKYNTHLMSRLAREELVHHEQVLRLMKRRGVP------LRPVSAGRYASGLRRLVRAHEPVKLVDTLVVGAFIEARSCERFAALVPHL-DEELGRFYHGLLKSEARHYQGY-----KLAHNYGDEADIARCVELVRAAEME..... 185
61 -16.2004zkh_A mol:protein length:169 Ferritin  ali model follow..  12  2..................SEELLDLFNRQVTQEFTASQVYLSASIWFDQN-MLAQSAEEREHGLGFVDFANKRN-------------IPIELQAVPAPVSCAEWSSPEDVWQSILELEQRSLLNLAEAASTCHDFAVMAFLNPFHLQQVNEEDKIGSILAKVT........................... 143
62 -16.2004zlw_A mol:protein length:168 Ferritin  ali model follow..  12  2..................SEELLDLFNRQVTQEFTASQVYLSASIWFDQN-MLAESAEEREHGLGFVDFANKRN-------------IPIELQAVPAPVSCAEWSSPEDVWQSILELEQRSLLNLAEAASTCHDFAVMAFLNPFHLQQVNAEDKIGSILAKVT........................... 143
63 -16.0003qz3_A mol:protein length:184 Ferritin  ali model follow..  12  11.................LSQAMVEHLNEQINLEFFSSNLYLQMSAWCEDEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAPRHD----------------ASLGEVFRETYQHEQQQINKLAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKLE........................... 151
64 -16.0001nnq_A mol:protein length:171 Rubrerythrin  ali model follow..  14  1..............MVVKRTMTKKFLEEAFAGESMAHMRYLIFAEKAEQELFRAIAYAEFVHAKNHFIALGKLG---------------------------KTPENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEK.......................... 130
65 -15.8004mud_A mol:protein length:235 Ring oxydation complex/ phenylacetic acid degradation related protein  ali model follow..  11  14................DLTNTLVNIIELRADFELAMVEQYSPWLVNAPT-FVAKLVSDELNHGWQLVRLLEEFKVKDVIE-----RISNARLGIHKLEVSNLPLFNWEDVIAFTFLVDGAGLYQLKILKDCSFEP-LSTLASSMIKEEESHIFFSQNELRNYQNKNRMQGAINFWFPRAVE......... 176
66 -15.6004cmy_A mol:protein length:203 FERRITIN  ali model follow..  14  2.................LSKTILDKLNHQVNFEAASAHLYLQMSAWLLTAFFRAHAEEEKAHMMKLFDYINETGSLALIGEVATPAPE----------------KSHIELLEAAYNHELQSINDLVDTALREKDYSTFQFLQWYVAEQHEEEYLFSSMLHKARIINTMDGRALFRFDEEVRK........ 161
67 -15.4001krq_A mol:protein length:167 ferritin  ali model follow..  13  2.................LSKEVVKLLNEQINKEMYAANLYLSMSSWCYEAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQN----------------KSLLDVFEKTYEHEQKSINTLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIK........................... 142
68 -15.3002jd6_0 mol:protein length:174 FERRITIN HOMOLOG  ali model follow..  12  2.................LSERMLKALNDQLNRELYSAYLYFAMAAYFEDNWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPPKE----------------ESPLKAFEAAYEHEKKSIYELAALAEEEKDYSTRAFLEWFINEQVEEEASVKKILDKLK........................... 142
69 -15.2003kx9_A mol:protein length:173 Ferritin  ali model follow..  11  1..............MASISEKMVEALNRQINAEIYSAYLYLSMASYFDSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSE----------------DSPLAAFEHVYEHEVKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLR........................... 144
70 -15.1003bve_A mol:protein length:181 Ferritin  ali model follow..  12  10.................LSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHK----------------EGLTQIFQKAYEHEQESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIE........................... 150
71 -15.1003vnx_A mol:protein length:204 ferritin  ali model follow..  12  19LSTVTQAPVTDSYARVEYHIECEAAINEQINIEYTISYVYHALHSYFARKFFKEASDEEREHAHMLMDYQTKRG----------GRVELKPLAAPEMEFANDDKGEALYAMELALSLEKQKLQALQAIADKHKDAALCDFVEGLLSEQVDAVKEHAVYVSQLRGKGVGVYLLDQELGE............ 201
72 -15.1004xgs_A mol:protein length:165 Ferritin  ali model follow..  11  1................HLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINT----------------ESPFAEYSSLDELFQETYKLEQQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLS........................... 142
73 -15.1001eum_A mol:protein length:165 FERRITIN 1  ali model follow..  12  2.................LKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAE----------------SSLDELFQETYKHEQQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLS........................... 142
74 -15.0003a68_A mol:protein length:212 Ferritin-4, chloroplastic  ali model follow..  11  31.......VPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRKFFKESSEEEREHAEKLMEYQNKRG----------GKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKEKLLNLHSVATKNGDVQLADFVETYLGEQVEAIKRISEYVAQLR........................... 189
75 -15.0001s3q_A mol:protein length:173 ferritin  ali model follow..  11  1..............MASISEKMVEALNRQINAEIYSAYLYLSMASYFDSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSE----------------DSPLAAFEHVYEHEVKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLR........................... 144
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.