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Query: 3qt1_I mol:protein length:133 DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerase III subunit RPC10, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQLQIRSADEPMTTFYKCVNCGHRWKENLast
1 -61.2003qt1_I mol:protein length:133 DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerase III subunit RPC10  ali model  100  1MGSSSSGLVPRGSHMTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQLQIRSADEPMTTFYKCVNCGHRWKEN 127
2 -55.5001i3q_I mol:protein length:122 DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE  ali model follow..  84  1..............MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSD 113
3 -54.9005x4z_I mol:protein length:115 DNA-directed RNA polymerase subunit  ali model follow..  66  1..............MASFRFCLECNNMLYPKEDKENQRLLYSCRNCDYTELAEDPKVYRHELITNIGETAGIVDDIGQDPTLPRSDKECPECHSRDCVFFQSQQRRKDTNMTLFYVCLNCKKTFRDE 113
4 -54.5003h0g_I mol:protein length:113 DNA-directed RNA polymerase II subunit RPB9  ali model follow..  50  1..............MSNFQYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAATSKVYRHELQSSNVENTTVSHDASTDPTLPRSDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFEEQ 113
5 -51.8005flm_I mol:protein length:125 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9  ali model follow..  39  1....MEPDGTYEPGIVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTHCGHRWTE. 125
6 -51.8005fj8_I mol:protein length:110 DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10  ali model follow..  38  2.................LSFCPSCNNMLLITSGDSG-VYTLACRSCPYEFPIEGIEIYDRKKLPRKEVDDVLGGGWDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWKEN 110
7 -42.3004c2m_I mol:protein length:125 DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12  ali model follow..  24  2............SVVGSLIFCLDCGDLLENPNAVLGSN--VECSQCKAIYPKSQFSNLKVVTTTAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRTN 124
8 -28.6001qyp_A mol:protein length:57 RNA POLYMERASE II  ali model follow..  38  2........................................................................SHMEQDLKTLPTTKITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWRS. 55
9 -27.6001pqv_S mol:protein length:309 Transcription elongation factor S-II  ali model follow..  29  231................................................CDAKDLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK.. 307
10 -26.3003gtm_S mol:protein length:173 Transcription elongation factor S-II  ali model follow..  22  49...............NEAAYKARYRIIYSNVISKNNPDLKHKIEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADHPLTTFCTCEACGNRWKFS 167
11 -26.3005xon_U mol:protein length:190 General transcription elongation factor TFIIS  ali model follow..  24  72...............VDDTYRNKLRSLIMNLKNKNNPTLRRSISKLVTMSAQELAPDSLKKEMEEIYKKNLFDAQGATENNSVTDRFECGKCKQRKVSYFQKQTRSAAAPLTTFCKCENCGNRWK.. 188
12 -26.1003po3_S mol:protein length:178 Transcription elongation factor S-II  ali model follow..  21  60...............NEAAYKARYRIIYSNVISKNNPDLKITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRWKFS 178
13 -25.3005iy6_U mol:protein length:301 Transcription elongation factor A protein 1  ali model follow..  31  223................................................MTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK.. 299
14 -13.4002fiy_A mol:protein length:309 Protein fdhE homolog  ali model follow..  14  184...................LCPACGSPMIRQGGKETGLRYLSCSLCACEWHYVR--------------------------------IKCSHCEESKYLSLEHDGQPAEKAVLRAETCPSCQGYLK.. 264
15 -12.4005k5i_A mol:protein length:117 Transcriptional repressor CTCF  ali model follow..  14  9....................CSLCSYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA----------------KFHCPHCDTARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHER 107
16 -12.1005c1z_A mol:protein length:405 E3 ubiquitin-protein ligase parkin  ali model follow..  16  261.........EECVLQMGGVLCPGCGAGLLPEPDQRGFAFCRECKEAYHEAVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRV 396
17 -11.9005yel_A mol:protein length:176 Transcriptional repressor CTCF  ali model follow..  15  65....................CRYCDYALIQHQKSHKNEKRFKCDQCDYASRQERHMIMHKRTHTGEK------------------PYACSHCDQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 163
18 -11.9005edv_A mol:protein length:380 E3 ubiquitin-protein ligase RNF31  ali model follow..  15  103................KFLWCAQCSFGFIYEREQLEATCPTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCKFSYAL---------ARGGCMHFHCTQCRHQF... 205
19 -11.8005kkq_A mol:protein length:150 Transcriptional repressor CTCF  ali model follow..  19  9....................CPDCDELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGER------------------PFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQS 104
20 -11.7005yef_A mol:protein length:199 Transcriptional repressor CTCF  ali model follow..  14  90....................CSLCSYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA----------------KFHCPHCDTARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHER 188
21 -11.7002n25_A mol:protein length:112 Zinc finger and BTB domain-containing protein 17  ali model follow..  15  6....................CEDCGGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTHSPLK------------------PYGCEECGKSYRLISLLNLHKKRHSGEARYRCEDCGKLFTTS 100
22 -11.6003zms_C mol:protein length:509 INSULINOMA-ASSOCIATED PROTEIN 1  ali model follow..  13  368....................CHHCAAYLRKHLLAHHQALQAKGAPLAPPAEDLLALYPGPDEKAPQEAAGDGEGAGVLGLSASAECHLCPVCGSKGAQERHLRLLHAAQV----FPCKYCPATFYSS 480
23 -11.6005c9v_A mol:protein length:330 E3 ubiquitin-protein ligase parkin  ali model follow..  14  177YNRYQQYAAEECVLQMGGVLCPGCGAGLLPEPDQRGFAFCRECKEAYHEAVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRV 321
24 -11.6002m0d_A mol:protein length:112 Zinc finger and BTB domain-containing protein 17  ali model follow..  12  6....................CDYCGTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADG------------------PLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCIHCQRQFADP 100
25 -11.5004zyn_A mol:protein length:425 E3 ubiquitin-protein ligase parkin  ali model follow..  13  281.........EECVLQMGGVLCPGCGAGLLPEQGQRGFVFCRDCKEAYHESMFEASGATSQAYRVDQRAAEQARWEEASKETIKKTTKPCPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNCGCEWNRA 416
26 -11.5002dlq_A mol:protein length:124 GLI-Kruppel family member HKR3  ali model follow..  16  10....................CPTCHYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ---------------VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQK 107
27 -11.5005k5h_A mol:protein length:122 Transcriptional repressor CTCF  ali model follow..  17  11....................CSMCDSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK------------------PYECYICHARQSGTMKMHILQKHTENVAKFHCPHCDTVIARK 107
28 -11.4006djx_A mol:protein length:432 RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase  ali model follow..  15  301..................VLCPGCGMGLLVEPECKKVTCQNGCGCLPEGTSTNASGSCEYSVDPNRAAEA--RWDEASKVTIKVMTKPCPKCRTPTERDGGAMHMVCTRAGCGFEWCWICQTEWTRD 424
29 -11.4005t0u_A mol:protein length:177 Transcriptional repressor CTCF  ali model follow..  12  8....................CHLCGTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEK-----------------PFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDT 103
30 -11.3002m48_A mol:protein length:141 E3 UBIQUITIN-PROTEIN LIGASE PARKIN  ali model follow..  17  1.........EEYVLQAGGVLCPGCGMGLLVEPDCRKVTCQNGCGYCLQGYHIGECLPEGTGASATNSCEYTVDPDEASNVTIKVSTKPCPKCRTPTERDGGCMHMVCTRAGCGFEWCWVCQTEWTRD 133
31 -11.3005v3g_D mol:protein length:174 PR domain zinc finger protein 9  ali model follow..  18  66....................CRECGSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEK------------------PYVCRECGRKSNLLSHQRTHTGEKP----YVCRECGRGFRNK 160
32 -11.2003tsq_A mol:protein length:658 Transcriptional regulatory protein  ali model follow..  17  1.GSQSAGGAMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPY------------------DRPFTVMAAFPLCPACDKE---YRDPLDRRFHAQPV---ACPECG...... 96
33 -11.2005yj3_C mol:protein length:107 Telomere zinc finger-associated protein  ali model follow..  13  10....................CEFCEPLLRHVASRHQEGRPHFCQICGKTFKAVEQLRVHVRRHKGVR------------------KFECTECGYKFTRQAHLRRHMEIHDRVENYNPRQRKLRNLII 105
34 -11.1002i13_A mol:protein length:190 Aart  ali model follow..  16  80....................CPECGANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK------------------PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174
35 -11.1005caw_A mol:protein length:321 E3 ubiquitin-protein ligase parkin  ali model follow..  12  174YEQYHRFATEEFILQAGGVLCPGCGQGILIDQNCNGYVFCGKCLCLNPTDVPFLSQNCDYPLDPEKLEKA--RWDEASSTVIKVLTKPCPKCRTSTERAGGCMHMICTRANCGFHWCWVCQGPWERD 313
36 -11.0002iyk_A mol:protein length:162 REGULATOR OF NONSENSE TRANSCRIPTS 1  ali model follow..  16  13....................CSYCGI--------HDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNV--FLLGFIPAKADSVVVLLCRQP....... 102
37 -11.0005und_A mol:protein length:202 Transcriptional repressor CTCF  ali model follow..  14  94....................CPHCDTVIARKSDLGVHLRKKKCRYCDAVFHERYALIQHQKSHKNEK------------------RFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQK 190
38 -11.0002k3r_A mol:protein length:123 Ribonuclease P protein component 4  ali model follow..  14  1MAKYNEKKEKKRIAKERIDILFSLAERVFPYSPELAKRYVELALLVQQKAKVKIPRKWKRRY--------------------------CKKCHAFLVPGINARVRRQKRMPHIVVKCLECGHIMR.. 100
39 -10.9003w5k_B mol:protein length:264 Zinc finger protein SNAI1  ali model follow..  21  156....................CKYCNKEYLLKMHIRSHTLPCVCGTCGKAFSRPWLLQGHVRTHTGEK------------------PFSCPHCSRRSNLRAHLQTHSDVKK----YQCQACARTFSRM 248
40 -10.9005egb_A mol:protein length:144 Histone-lysine N-methyltransferase PRDM9  ali model follow..  17  36....................CRECGSHLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEK------------------PYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRNK 130
41 -10.8004g9i_A mol:protein length:772 Hydrogenase maturation protein HypF  ali model follow..  21  89EKSSKGGKGGDSIIPPDIAICDDCLRELFDPTNKRYMYPFIVCTNCGPRFTIIEDLPY------------------DRENTTMKEFPMCDFCRSE---YEDPLNRRYHAEPT---ACPVCG...... 185
42 -10.7004k95_A mol:protein length:470 E3 ubiquitin-protein ligase parkin  ali model follow..  12  317YNRYQQYGAEECVLQMGGVLCPGCGAGLLPEQGQRGFVFCRDCKEAYHESMFEASGATSQAYRVDQRAAEQARWEEASKETIKKTTKPCPRCN------VPIEKNGGCMHMK-LEWCWNCGCEWNRA 461
43 -10.7002j7a_C mol:protein length:159 CYTOCHROME C QUINOL DEHYDROGENASE NRFH  ali model follow..  15  35............KYTDQRPFCTSCHIM-VGVTHKLSGHANISCNDCHAPHNLLAKLPFKAIAGARDTLGHPGDLILAGMETKEVVNANCKACHTMTNVEVASMEAKK--------YCTDC....... 139
44 -10.7004xr8_F mol:protein length:151 Protein E6  ali model follow..  11  30....................CVYCKQQLLRREVYDFAFRDLVCDKCLKFYSKISEYRHYSYSLYGTTLEQQYNKPLSD------LLIRCINCQKPLSPEEKQRHLDKKQRFHNI-RCMSCSRSSRTR 146
45 -10.6003cng_A mol:protein length:189 NUDIX hydrolase  ali model follow..  17  1...............GHMKFCSQCGGEVILRIPEGDTLPRYICPKCHTI.............................................................................. 34
46 -10.5001wjp_A mol:protein length:107 Zinc finger protein 295  ali model follow..  19  1........................GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN--------------------AAVCPYCSLR---FFSPELKQEHESKC--LTCLECMRTFKSS 82
47 -10.4003vd6_C mol:protein length:119 Erythroid transcription factor  ali model follow..  17  5....................CVNCGATATPRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRMIVSKRA----------------GTQCTNCQTTTTTLWRRNASGD-------PVCNACGLYFKLH 90
48 -10.3003vth_A mol:protein length:761 Hydrogenase maturation factor  ali model follow..  18  97...GSKEDGGFVPVSPDMGVCEDCLRELKDPKDRRYRYPFINCTNCGPRFSIIEDIPY------------------DRAKTSMKVFPMCEKCSRE---YHDPHDRRFHAQPV---ACFDCG...... 190
49 -10.3001b8t_A mol:protein length:192 PROTEIN (CRP1)  ali model follow..  14  10....................CGVCQKAVYFAEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAVYAAEKVIGAGKSWHKSCF-RCAKCGKSLEST 155
50 -10.3002wbt_A mol:protein length:129 B-129  ali model follow..  10  15....................SNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQ------FVCPLCLMSSSVSLKQHIRYTEHT----KVCPVCKKEFTST 113
51 -10.1005vmu_A mol:protein length:134 Transcriptional regulator Kaiso  ali model follow..  10  26....................CIVCKTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGER------------------RYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCR 120
52 -10.1004kfz_A mol:protein length:150 LMO-2  ali model follow..  13  2LDPSEEPVDEVLQIPPSLLTCGGCQQNIGDRIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRR---------DYLRLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVG 124
53 -10.0002dfy_X mol:protein length:195 fusion protein of LIM domain transcription factor LMO4 and LIM domain-binding protein 1  ali model follow..  12  6....................CAGCGRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRN---------DYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPG 108
54 -9.8504jcj_A mol:protein length:173 Insulin gene enhancer protein ISL-1,LIM domain-binding protein 1  ali model follow..  14  9....................CVGCGNILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKT--------------KRDYIRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPG 109
55 -9.8405wjq_D mol:protein length:288 Zinc finger protein 568  ali model follow..  16  179....................CKECGTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEK------------------PYECKECGKTFGRGSELSRHQKIHTGEKPYKCQQCGKAFIRG 273
56 -9.8401x0t_A mol:protein length:120 Ribonuclease P protein component 4  ali model follow..  13  48ALEIQKKAKVKIPRKWKRRYCKRCHTFLIP-RTKRMPHVVITCLECGYIMRYPYLREVKQKRKKAT............................................................. 120
57 -9.8103gj7_B mol:protein length:98 Nuclear pore complex protein Nup153  ali model follow..  13  12....................CDTCL------QNKVTDNKCIACQAAKLPLKETAKQTGIGTPSKSDKPASTSGTGFGDKFKPAIGTWDCDTCLVQNKPEAV--------------KCVACE...... 93
58 -9.7505m45_C mol:protein length:168 Acetone carboxylase gamma subunit  ali model follow..  9  73....................RCECGHDF-----------------CDWKDNWKLHARVHVRDTPQKMEEIYPRLMAPTPSWQVIREYFCPECG----TLHDVEAPTPWYPVI............... 143
59 -9.6602qkd_A mol:protein length:404 Zinc finger protein ZPR1  ali model follow..  17  177................................................ITYYDRTPQQAEMLGLQAEAPEEKAEEEDLRNEVLQFNTNCPECNAPQTNMKLVQIPHFKEVIIMATNCENCGHRTNE. 255
60 -9.6102ypa_C mol:protein length:145 RHOMBOTIN-2  ali model follow..  12  2.........GSSSQDPSLLTCGGCQQNIGDRIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDG---------LCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVG 115
61 -9.5801rut_X mol:protein length:188 Fusion protein of Lmo4 protein and LIM domain-binding protein 1  ali model follow..  11  8....................CAGCGRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSG---------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPG 110
62 -9.5005oqj_6 mol:protein length:461 Suppressor of stem-loop protein 1  ali model follow..  22  349....................CPNCHSKV---------SLPTVCPCCDLM------LILXXXXXXXXXXXXXXKTFAEVPTTEKFRSEDCFSCQSR-----XXXXXXXXXXXXSRYRCEDCKQEF... 436
63 -9.4805v3m_C mol:protein length:314 Zinc finger protein 568  ali model follow..  16  204....................CKECGTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEK------------------PYECKECGKTFGRGSELSRHQKIHTGEKPYKCQQCGKAFIRG 298
64 -9.4002jne_A mol:protein length:101 Hypothetical protein yfgJ  ali model follow..  23  29....................CPQCQHVLDQDNGH------ARCRSCGEFIEMKAL---------------------------------CPDCHQPLQVLKACGAVD--------YFCQHGHGLISK. 87
65 -9.3406f0k_A mol:protein length:211 Cytochrome c family protein  ali model follow..  16  61....................CRYCHN----VSDKANIPPTQTCINCHSQILTDSPRLQAVRDSWATDRSIEWVKVHHLPDYAHNNGVGCETCHGRIDQMDVVRLVEPLSMGW----CLECHRQPELY 169
66 -9.3305xfp_A mol:protein length:336 PHD finger protein 1  ali model follow..  11  73..........TVVPGNRLVSCEKCRHAYHQDAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGDAGHLSNRQQSYCYCGGPG------------EWNLKMLQCRSCLQWFHEA 190
67 -9.3203ldy_A mol:protein length:142 restriction endonuclease PacI  ali model follow..  13  1.................MTQCPRCQRNLAADEFYAGS---------SKMCKGCMTWQNLSYNANKEGHANTFTKATFLAWYGLSAQRHCGYCG-QCLGVDRSDSFEGYSPQNARLACFIC-NRIKSN 118
68 -9.2002cup_A mol:protein length:101 Skeletal muscle LIM-protein 1  ali model follow..  10  8....................CVECRKPIGADSNRFWHDTCFRCAKCLHPLANETFVAKDNKIL--------------NKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFSGPSSG...... 101
69 -9.1705ze8_A mol:protein length:435 cytochrome c552  ali model follow..  16  26.PAAQAEPGAEPIHRVSSELCANCHEDIYRQWKGSMH--------------AKSTALSDPIHGLFYQQEVGDPTAEGMVHKKSGKFPLCLYCHAPNAARDQTTKLDAHPAYTEGVNCVAC....... 130
70 -9.0905t6r_V mol:protein length:917 Maltose binding protein, 60S ribosomal export protein Nmd3 fusion  ali model follow..  18  429..KLTVDITQGIPREANISFCRNCERFLQPPGELESRELLAICKGLTKVRLVDASFIWTEPHSRRIRIKLTVQGEAMTNTIIQQTAMQCPDCARSYTTNTTVQIRQKVPHKRTFL............ 561
71 -9.0601dfx_A mol:protein length:125 DESULFOFERRODOXIN  ali model follow..  10  1............PKHLEVYKCTHCGNIVEVLHGGGAELVC--CGE-------PMKHMVEGSTDGAMEKHVPVIEKVDGGYLIKVGSVPHPMEEKHWIEWIELLADGDASKVTAREYCNLHG--WKAE 124
72 -9.0503w0f_A mol:protein length:287 Endonuclease 8-like 3  ali model follow..  13  170...KKQGDRMLCDVLLDQRVLPGVGNIIKNE-------ALFDSGLHPAVKVCQLSDKQACHLVKMTRDFSILFYRCCKAGSAISKRPNCDQCHSK------TVCRFGENSRMTYF-CPHCQK..... 281
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.