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Query: 3sid_A mol:protein length:180 Symerythrin, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGLNYNQEDFMGLDRFFQDAVSHNNTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEVALast
1 -73.9003sid_A mol:protein length:180 Symerythrin  ali model  100  1MGLNYNQEDFMGLDRFFQDAVSHNNTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEVA 180
2 -49.2001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  29  2..................KDLKGTKTAENLKQGFIGE-SMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDK------------------PIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQLKGGT 144
3 -48.1004di0_A mol:protein length:144 Rubrerythrin  ali model follow..  28  6..................AQLKGSKTEENLKYAFAGE-SQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPF--------------------GTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGLVD.. 144
4 -42.8001yux_A mol:protein length:202 Nigerythrin  ali model follow..  24  9.....TVKNATNFNMVADSKTSVGSTLENLKAAIAGE-TGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPSAY---------------SCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYNDIDAPD 167
5 -41.3002qqy_A mol:protein length:149 Sigma B operon  ali model follow..  18  4..................MSHDVKELIEGLNEDLAGE-YSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTTIP---------------LRVKQAEDVREMLEYARQSEYETIKR-YEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLNDKA... 145
6 -40.7001nf4_A mol:protein length:179 bacterioferritin  ali model follow..  17  8.....................RKAKVIEVLNKARAME-LHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKE--------------GKVVTGQAVPVIYESDADQEDATIE-AYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLG 150
7 -40.3002oh3_A mol:protein length:167 COG1633: Uncharacterized conserved protein  ali model follow..  16  4.......................YTLAEFLAHAIALET-EAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQ---RWKTPPEVGDENDIHYLMTPYHALRYARDNEIRG----MEYYKEAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTPRPS 153
8 -39.8003fvb_A mol:protein length:182 Bacterioferritin  ali model follow..  13  1....MAMGTLEAQTQGPGSMKGEPKVIERLNEALFLE-LGAVNQYWLHYRLLNDWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTV--------------SPLRIGQNVKEVLEADLKGEYDARAS-YKESREICDKLGDYVSKQLFDELLADEEGHIDFLETQLDLLAKIG 160
9 -39.3001b71_A mol:protein length:191 PROTEIN (RUBRERYTHRIN)  ali model follow..  24  2..................KSLKGSRTEKNILTAFAGES-QARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVAAF----------------PAGIIADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIKEGR 146
10 -39.2002clb_A mol:protein length:188 DPS-LIKE PROTEIN  ali model follow..  10  1MQEKPQEPKVVGVEILEKSGLDIKKLVDKLVKATAAE-FTTYYYYTILRMHLTGMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQL---ADISACSDAYLPENWKDPKEILKVLLEAEQCAIRT-WKEVCDMTYG-KDPRTYDLAQRILQEEIEHEAWFLELLYGRPSGH 174
11 -38.8005xx9_A mol:protein length:167 Bacterioferritin  ali model follow..  15  1...................MQGDPEVIEFLNEQLTAE-LTAINQYFLHAKLQDHKGWTKLAKYTRAESFDEMRHAEVLTDRILLLDGLPNYQRL--------------FHVRVGQSVTEMFQADREVELEAIDR-LRRGIEVMRAKHDITSANVFEAILADEEHHIDYLETQLDLIEKLG 145
12 -38.7001jgc_A mol:protein length:161 bacterioferritin  ali model follow..  16  1...................MKGDAKVIEFLNAALRSE-LTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKL--------------DPLRIGEGPRETLECDLAGEHDALK-LYREARDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISLYDRLG 145
13 -38.3003gvy_A mol:protein length:161 Bacterioferritin  ali model follow..  14  1...................MQGDAKVIEYLNAALRSE-LTAVSQYWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRL--------------NPLRIGQTLRETLDADLAAEHDARTL-YIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDLMGSIG 145
14 -38.2002wtl_A mol:protein length:173 BACTERIOFERRITIN  ali model follow..  17  5...................MQGDPDVLRLLNEQLTSE-LTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRI--------------GSLRIGQTLREQFEADLAIEYDVLNR-LKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLG 149
15 -37.9003bkn_A mol:protein length:161 Bacterioferritin  ali model follow..  17  1...................MQGDPDVLKLLNEQLTSE-LTAINQYFLHSKMQDNWGFTELAEHTRAESFEEMRHAETITDRILLLDGLPNYQRL--------------FSLRVGQTLREQFEADLAIEYEVLER-LKPGIVLCREKQDATSARLLEQILADEETHIDYLETQLQLMDKLG 145
16 -37.5004r42_A mol:protein length:236 Alr3090 protein  ali model follow..  13  11...............VVNIGEANPRFAQLLLEQFGGATGE-LSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEAYKSTLDSQGNAWTASYLNEGGDVVRDLRANIAAEAGARQ----TYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLGKLT 181
17 -37.4003qb9_A mol:protein length:174 Bacterioferritin  ali model follow..  17  3...................MQGDPDVLRLLNEQLTSE-LTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRI--------------GSLRIGQTLREQFEADLAIEYDVLNR-LKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLG 147
18 -37.2004am2_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  17  1...................MKGDQKVIEYLNRGLRSE-LTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTL--------------DPLRIGQTVKEVLESDLAAEREARAL-YQEGAAYAASVGDFPSKNLFEELMGDEEHHIDFLETQLDLVSKLG 145
19 -37.2001sof_A mol:protein length:156 Bacterioferritin  ali model follow..  17  1...................MKGDKIVIQHLNKILGNE-LIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQEL--------------GKLLIGEHTKEMLECDLKLEQAGLPD-LKAAIAYCESVGDYASRELLEDILESEEDHIDWLETQLDLIDKIG 145
20 -36.8005zur_A mol:protein length:158 Bacterioferritin  ali model follow..  12  1...................MKGDKTVIQFLNKQLTNE-LTAINQYFLHARMLNHWGFDKLGKHEYEESIGEMKHADRLIARIFMLDGLPNLQDL--------------HKLLIGEDVPELLACDLKLEQAAHAT-VREAIAHCESVRDYVSRDLFQDILDDTEEHIDYLETQIDLIDKVG 145
21 -36.5001vjx_A mol:protein length:157 putative ferritin-like diiron-carboxylate protein TM1526  ali model follow..  16  8........................KVSDILTVAIRLEE-EGERFYRELSEHFN----GEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSII----LYYELKDGLVNSDAQKTVKKIIDQEKEHLRKLLEMKREST... 151
22 -36.4001bcf_A mol:protein length:158 BACTERIOFERRITIN  ali model follow..  13  1...................MKGDTKVINYLNKLLGNE-LVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDL--------------GKLNIGEDVEEMLRSDLALELDGAKN-LREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMG 145
23 -36.4004tof_A mol:protein length:158 Bacterioferritin  ali model follow..  14  1...................MKGDKKVIQHLNKILGNE-LIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDL--------------GKLLIGENTQEMLQSDLNLELCATKD-LREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVG 145
24 -36.3003e2c_A mol:protein length:158 Bacterioferritin  ali model follow..  13  1...................MKGDTKVINYLNKLLGNE-LVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDL--------------GKLNIGEDVEEMLRSDLALELDGAKN-LREAIGYADSVHDYVSRDMMIEILRDERGHIDWLRTELDLIQKMG 145
25 -36.1005d8x_A mol:protein length:158 Ferroxidase  ali model follow..  14  1...................MKGDKKVIQHLNKILGNE-LIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGAPNLQDL--------------GKLLIGANTQEMLQCDLNLELKATKD-LREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVG 145
26 -35.9004cvp_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  13  1..................AMKGDTKVINYLNKLLGNE-LVAINQYFLHARMFKNWGLKRLNDVEYRESIDEMKHADRYIERILFLEGLPNLQDL--------------GKLNIGEDVEEMLRSDLALELDGAKN-LREAIGYADSVRDYVSRDMMIEILRDEEGHIDWLETELDLIQKMG 146
27 -35.9003is7_A mol:protein length:158 Bacterioferritin  ali model follow..  14  1...................MKGDKKVIQHLNKILGNE-LIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDL--------------GKLLIGENTQEMLQCDLNLELKATKD-LREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVG 145
28 -35.6002fzf_A mol:protein length:175 hypothetical protein  ali model follow..  17  16....................MADFSLEELLGMAIKAEI-GAREFYKSLAEKIKI---EALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPV--ARELEKVQDIIDLIRWAMKAEEIA----AEFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLLN.. 163
29 -35.2001nnq_A mol:protein length:171 Rubrerythrin  ali model follow..  27  1..................MVVKRTMTKKFLEEAFAGES-MAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLG-----------------------------KTPENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEK.. 130
30 -34.6002vzb_A mol:protein length:170 PUTATIVE BACTERIOFERRITIN-RELATED PROTEIN  ali model follow..  15  13....................LDVKSLIDQLNAALSEE-WLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELARCKY-----DSPTAFDSVSLLNQNVSSERCAILR-YQEIANFTNG-KDYTTCDIAKHILAEEEEHEQDLQDYLTDIARMK 164
31 -33.1003r2h_A mol:protein length:154 Bacterioferritin  ali model follow..  15  1...................MQGHPEVIDYLNTLLTGE-LAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRMRP---------------DDIHPGTTVPEMLEADLKLERHVRAA-LAKGIALCEQHKDFVSRDILKALADTEEDHAYWLEQQLGLIARMG 145
32 -31.7003q4o_A mol:protein length:196 Uncharacterized protein MJ0754  ali model follow..  16  19......................SEEEKEGLIEMREEEK-LARDVYLTLYNKWKL-------QIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIA----DLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGS.. 164
33 -30.5003q4n_A mol:protein length:193 Uncharacterized protein MJ0754  ali model follow..  16  14......................SEEEKEGLIEMREEEK-LARDVYLTLYNKWKL-------QIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIA----DLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGS.. 159
34 -29.8001jku_A mol:protein length:266 pseudocatalase  ali model follow..  14  1MFKHT-----RKLQYNAKPDRSDPIMARRLQESLGGQETTGMMSYLSQGWAST--GAEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDPSLATTMNAGYVTSSGNLVADMRFNVVRESEARLQ----VSRLYSMTEDEGVRDMLKFLLARETQHQLQFMKAQEELEE.. 194
35 -28.4002cwl_A mol:protein length:302 manganese-free pseudocatalase  ali model follow..  15  1MFLRIDRLQIE----LPMPKEQDPNAAAAVQALLGGREMSTLMNYMYQSFNFRGKKLKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPESAPLGNGEYVFTSGNLILDLLHNFFLEVAARTH----KLRVYEMTDNPVAREMIGYLLVRGGVHAAAYGKALESLTG.. 201
36 -25.8003qz3_A mol:protein length:184 Ferritin  ali model follow..  17  12......................SQAMVEHLNEQINLE-FFSSNLYLQMSAWCEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAPRHD--------------ASLGEVFRETYQHEQKITQQINK-LAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKLELVG 154
37 -25.4003oj5_A mol:protein length:189 Ferritin family protein  ali model follow..  15  8......................KTKFHALMQEQIHNE-FTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQ--------------DRPREALALALDQERTVTDQVGR-LTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAG 150
38 -25.4005uxi_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  20  20.......................DAYSRINAIVIEGE-QEAHENYITLAQLL-----PESHDELIRLSKMESRHKKGFEACGRNLAVTPDLQFAKE----SGLHQNFQTAAAEGKVVTCLLIQSLIIECFAIA-AYNIYIPVA----DDFARKITEGVVKEEYSHLNFGEVWLKEHFAES 163
39 -25.4004z5s_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  21  19.......................DAYSRINAIVIEGE-QEAYSNYLQMAELL-----PEDKEELTRLAKMENRHKKGFQACGNNLQVNPDMPYAQE----AGLHGNFQHAFSEGKVVTCLLIQALIIEAFAIA-AYNIYIPVA----DDFARKITEGVVKDEYTHLNYGEEWLKANFATA 162
40 -24.7005u1b_A mol:protein length:189 MtrE protein,Ferritin chimera  ali model follow..  15  25......................SKDIIKLLNEQVNKE-MNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIVFLNENNVPVQLTSI-------------SAPEHKFEGLTQIFQKAYEHEQHISESINN-IVDHAIKSKDHATFNFLQWYVSEQHEEEVLFKDILDKIELIG 167
41 -24.4005uwz_A mol:protein length:243 Aldehyde decarbonylase  ali model follow..  20  20.......................DAYSRINAIVLEGE-REAHANYLTLAEML-----PDHAEALKKLAAMENRHFKGFQSCARNLEVTPDDPFARA----EQLDGNFQQAAAEGDLTTCMVIQALIIECFAIA-AYNVYIPVA----DAFARKVTEGVVKDEYTHLNFGQQWLKERFVTV 163
42 -24.2004quw_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  19  19.......................DAYSRINAIVIEGE-QEAFDNYNRLAEML-----PDQRDELHKLAKMEQRHMKGFMACGKNLSVTPDMGFAQ--KFFERLHENFKAAAAEGKVVTCLLIQSLIIECFAIA-AYNIYIPVA----DAFARKITEGVVRDEYLHRNFGEEWLKANFDAS 162
43 -24.0004kvr_A mol:protein length:244 Aldehyde decarbonylase  ali model follow..  19  33.......................DAYSRINAIYIEGE-QEAHDNYIAIGTLL-----PDHVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFARE----APLRDNFQTALGQGKTPTCLLIQALLIEAFAIS-AYHTYIPVS----DPFARKITEGVVKDEYTHLNYGEAWLKANLESC 176
44 -23.9004pgi_A mol:protein length:250 Aldehyde decarbonylase  ali model follow..  20  33.......................DAYSRINAIVIEGE-QEAHDNYIAIGTLL-----PDHVEELKRLAKMEMRHKKGFTACGKNLGVKADMDFARE----APLRDNFQTALGQGKTPTCLLIQALLIEAFAIS-AYHTYIPVS----DPFARKITEGVVKDEYTHLNYGEAWLKANLESC 176
45 -23.7001eum_A mol:protein length:165 FERRITIN 1  ali model follow..  13  1....................MLKPEMIEKLNEQMNLE-LYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAE--------------SSLDELFQETYKHEQLITQKINE-LAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAG 145
46 -23.7004xgs_A mol:protein length:165 Ferritin  ali model follow..  13  3......................KPEMIEKLNEQMNLE-LYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTV-------------ESPFAEYSSLDELFQETYKLEQLITQKINE-LAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAG 145
47 -23.7001krq_A mol:protein length:167 ferritin  ali model follow..  12  3......................SKEVVKLLNEQINKE-MYAANLYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQN--------------KSLLDVFEKTYEHEQFITKSINT-LVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIG 145
48 -23.6004zkh_A mol:protein length:169 Ferritin  ali model follow..  10  1.....................GSEELLDLFNRQVTQE-FTASQVYLSASIWFDQNDWEGMAAYMLAQSAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAE------------SSPEDVWQSILELEQANTRSLLN-LAEAASTCHDFAVMAFLNPFHLQQVNEEDKIGSILAKVTDEN 146
49 -23.5004zlw_A mol:protein length:168 Ferritin  ali model follow..  10  1.....................GSEELLDLFNRQVTQE-FTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAE------------SSPEDVWQSILELEQANTRSLLN-LAEAASTCHDFAVMAFLNPFHLQQVNAEDKIGSILAKVTDEN 146
50 -23.5004ztt_A mol:protein length:166 Bacterial non-heme ferritin  ali model follow..  13  4......................KPEMIEKLNEQMNLE-LYASLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAE--------------SSLDELFQETYKHEQLITQKINE-LAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAG 146
51 -23.4003bve_A mol:protein length:181 Ferritin  ali model follow..  15  11......................SKDIIKLLNEQVNKE-MNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHK--------------EGLTQIFQKAYEHEQHISESINN-IVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIG 153
52 -23.3004cmy_A mol:protein length:203 FERRITIN  ali model follow..  13  3......................SKTILDKLNHQVNFE-AASAHLYLQMSAWLLTQSLDSTAAFFRAHAEEEKAHMMKLFDYINETGSLALIGEVATPAPE--------------KSHIELLEAAYNHELAITQSIND-LVDTALREKDYSTFQFLQWYVAEQHEEEYLFSSMLHKARIIN 145
53 -23.2002jd6_0 mol:protein length:174 FERRITIN HOMOLOG  ali model follow..  18  3......................SERMLKALNDQLNRE-LYSAYLYFAMAAYFEDLGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPPKE--------------ESPLKAFEAAYEHEKFISKSIYE-LAALAEEEKDYSTRAFLEWFINEQVEEEASVKKILDKLKFAK 145
54 -22.9005k53_A mol:protein length:262 aldehyde deformylating oxygenase  ali model follow..  20  45.......................DAYSRINAIVIEGE-QEAHDNYLTLAELL-----ADKKAELVGLSKMENRHMKGFQACGRNLKVTPDMAFAKQ----SELHKNFQTAAAQGQIVTCLLIQSLIIECFAIA-AYNIYIPVA----DDFARKITEGVVKEEYSHLNFGEVWLQAHFEES 188
55 -22.8005n5e_e mol:protein length:99 PFC_05175  ali model follow..  18  20...................................................................................................................ELMEILRLAIIAELDAIN----LYEQMARYSEDENVRKILLDVAREEKAHVGEFMALLLNLDP.. 78
56 -22.7003kx9_A mol:protein length:173 Ferritin  ali model follow..  14  5......................SEKMVEALNRQINAE-IYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSE--------------DSPLAAFEHVYEHEVNVTKRIHE-LVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIG 147
57 -22.7005k52_A mol:protein length:265 Aldehyde decarbonylase  ali model follow..  23  45.......................DAYSRINAIVIEGE-DEAANNYVRLAELM-----PEQSEELASLAKMEARHKKGFTACGKNLNVTPDMDFAKK----SDLHGNFQVAAAAGNIVTCLLIQALIIEAFAIS-AYNVYIPHA----DDFARKITENVVKDEYLHLNFGEQWLKANFESA 188
58 -22.5001s3q_A mol:protein length:173 ferritin  ali model follow..  14  5......................SEKMVEALNRQINAE-IYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAV-------------EEPPSEWDSPLAAFEHVYEHEVNVTKRIHE-LVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIG 147
59 -22.3002e0z_A mol:protein length:345 Virus-like particle  ali model follow..  9  12.................DKPYTKEELMEILRLAIIAEL-DAINLYEQMARYSED---ENVRKILLDVAREEKAHVGEFMALLLNLDPEQGGFEEVKELTGIEAHINDNKKEESNVEYFEKLRSALLDGVNKGR----SLLKHLPVTRIEGQSFRVDIIKFEDGVRVVKQEYK........ 163
60 -22.3005ls9_A mol:protein length:173 Ferritin, putative  ali model follow..  13  5......................SEKMVEALNRQINAE-IYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELCHAMKMFDFVSERGGRIFLQDI-------------KKPDSEWESPLAAFEHVYEHEVNVTKRIHE-LVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIG 147
61 -22.2001vlg_A mol:protein length:176 ferritin  ali model follow..  18  11......................SEKVRKALNDQLNRE-IYSSYLYLSMATYFDAEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPSN--------------NGIKDAFEAALKHEEFVTQSIYN-ILELASEEKDHATVSFLKWFVDEQVEEEDQVREILDLLEKAN 153
62 -22.1001za0_A mol:protein length:275 POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE)  ali model follow..  11  63.......................RTITDACEILLILKDNLAGHHRELVEHFILE---DWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANE-----DVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAV----FCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLD.. 205
63 -21.7002hz8_A mol:protein length:115 De novo designed diiron protein  ali model follow..  22  32...................................................................................................................ELARLIQEIVKAEKQAVK----VYKEAAEKARNPEKRQVIDKILEDEEKHIEWLKAASKQGNA.. 90
64 -21.6005hjf_A mol:protein length:185 Ferritin, Dps family protein  ali model follow..  12  28.....................VTAPVTEGFNVVLA-SFQALYLQYQKHHFVVEGSEFYSLHEFFNESYNQVQDHIHEIGERLDGLGGVPVATFSKLAELTCFEQESEGVY-----SSRQMVENDLAAEQAIIGV-IRRQAAQAESLGDRGTRYLYEKILLKTEERAYHLSHFLAK..... 174
65 -21.6005u1a_A mol:protein length:182 Ferritin,MtrE protein chimera  ali model follow..  13  1....................MLSKDIIKLLNEQVNKE-MNSSNLYMSMSS-SSSYSLDGCGTFLFDHAAEEYEHAKKLIVFLNENNVPVQLTSISAPEHK--------------EGLTQIFQKAYEHEQHISESINN-IVDHAIKSKDHATFNFLQWYVSEQHEEEVLFKDILDKIELIG 160
66 -21.5001moj_A mol:protein length:182 Dps-like ferritin  ali model follow..  11  26.....................RAEQCVDALNADLA-NVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVEDEDVY-----DIRTSLANDMAIYGDIIEA-TREHTELAENLGDHATAHMLREGLIELEDDAHHIEHYLED..... 172
67 -21.2001jig_A mol:protein length:146 Dlp-2  ali model follow..  13  2.....................TKTNVVEVLNKQVA-NWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLAT------MKEYLATSSVNEGTSKESAEEMVQTLVNDYSALIQE-LKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSAFLK...... 146
68 -20.8002d5k_A mol:protein length:156 Dps family protein  ali model follow..  13  1..................MASNQQDVVKELNQQVA-NWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGT------LTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQ-LENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLSL..... 149
69 -20.5002vxx_A mol:protein length:192 STARVATION INDUCED DNA BINDING PROTEIN  ali model follow..  13  25.....................TTTPICEGMNRLLA-SFQALYLQYQKHHFVVEGAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALCCFTPEPEGAF-----NCRQMLSNDLQAEQAIIGV-LRQQATQAESLGDRATAYLYDQILLKTEERAYHIGHFLAN..... 171
70 -20.2005ux2_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  15  13.......................EAYSRINGVVIVGE-GLANRHFQMLARRI-----PADRDELQRLGRMEGDHASAFVGCGRNLGVVADLPLAR--RLFQPLHDLFKRHDHDGNRAECLVIQGLIVECFAVA-AYRHYLPVA----DAYARPITAAVMNDESEHLDYAETWLQRHFDQV 156
71 -19.9003wnw_A mol:protein length:212 Ferritin heavy chain  ali model follow..  17  32.......................QDAEAAINRQINLE-LYASYVYLSMSCYFDRDALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDD-------------ESGLNAMECALHLEKSVNQSLLE-LHKLATDKNDPHLCDFIETYLSEQVKSIKELGDHVTNLRKMG 177
72 -19.4002cf7_A mol:protein length:165 DPR  ali model follow..  12  14.....................SLADSKAVLNQAVA-DLSVAHSILHQVHWYMRGRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKEV----LGDYNVTIEEQLARVVEVFR-YLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQAPK.. 164
73 -19.1003k6c_A mol:protein length:95 Uncharacterized protein NE0167  ali model follow..  10  18...................................................................................................................RDMHRAIISLREELEAVD----LYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRCDP.. 76
74 -19.1001n1q_A mol:protein length:149 DPS Protein  ali model follow..  12  5.....................IQQLVAVLLNRQVA-NWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIAT------LAASLEEASIKEATGGESAAEMVSSVVNDFVDLVGE-LKVARDVADEADDEATADMLDAIEAGLEKHVWMLEAFLE...... 149
75 -18.9001z6o_A mol:protein length:212 Ferritin light chain  ali model follow..  10  35.......................GNVATELQAYAKLH-LERSYDYLLSAAYFNNYNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHSTMKTERKNYTA--------NHELEALAKALDTQKERAFYIHREATRNSQHLHDPEIAQYLEEFIEDHAEKIRTLAGHTSDLKKFI 189
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Bourne PE, Allerston CK, Krebs W, Li W, Shindyalov IN, Godzik A.,Friedberg I, Liu T, Wild D, Hwang S, Ghahramani Z, Chen L, Westbrook J. The status of structural genomics defined through the analysis of current targets and structures. Pac Symp Biocomput. 2004;:375-86.