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Query: 4etr_A mol:protein length:153 Putative uncharacterized protein, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSHMNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDARALast
1 -64.3004etr_A mol:protein length:153 Putative uncharacterized protein  ali model  100  1GSHMNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDARA 153
2 -25.4002fzf_A mol:protein length:175 hypothetical protein  ali model follow..  11  10GLPIEKMADFSLEELLGMAIKAEIGAREFYKSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPVARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLL 162
3 -23.0002oh3_A mol:protein length:167 COG1633: Uncharacterized conserved protein  ali model follow..  10  1G------MGYTLAEFLAHAIALETEAAERYVELADMMENLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTP 150
4 -22.9001vjx_A mol:protein length:157 putative ferritin-like diiron-carboxylate protein TM1526  ali model follow..  12  1...MGSDKIMKVSDILTVAIRLEEEGERFYRELSEHFNG-EIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEILRRKTLKEVLDIAISVEKDSIILYYELKDGLVNSDAQKTVKKIIDQEKEHLRKLLEMKREST 151
5 -22.3002clb_A mol:protein length:188 DPS-LIKE PROTEIN  ali model follow..  11  17..EKSGLDIKKLVDKLVKATAAEFTTYYYYTILRMHLTGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISACSDAYLPENWKD--KEILKVLLEAEQCAIRTWKEVCDYGKDPRTYDLAQRILQEEIEHEAWFLELLYGRP 171
6 -22.0002vzb_A mol:protein length:170 PUTATIVE BACTERIOFERRITIN-RELATED PROTEIN  ali model follow..  16  10...QGKLDVKSLIDQLNAALSEEWLAYYQYWVGALVVEGADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELARC----YDSPTAFDSVSLLNQNVSSERCAILRYQEIANNGKDYTTCDIAKHILAEEEEHEQDLQDYLTDIA 161
7 -21.8003qb9_A mol:protein length:174 Bacterioferritin  ali model follow..  16  1...MGMQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNTELAAHTRAESFDEMRHAEEITDRILLLDGLPN------------YQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVEKQDTTSAVLLEKIVADEEEHIDYLETQLELMD 144
8 -21.6002qqy_A mol:protein length:149 Sigma B operon  ali model follow..  17  1.SNAMSHDVKELIEGLNEDLAGEYSAIIMYNHNAATVSGQVLKPFFESEISDEQGHALYLAEKIKTLGGTPT-------------TIPLRVKQAEDVREMLEYARQSEYETIKRYEKRKENLNMTELVVKLEDMIADETNHMEELDRLLNDKA 145
9 -20.9002wtl_A mol:protein length:173 BACTERIOFERRITIN  ali model follow..  15  1.ASGSMQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNTELAAHTRAESFDEMRHAEEITDRILLLDGLPN------------YQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVEKQDTTSAVLLEKIVADEEEHIDYLETQLELMD 146
10 -20.9004r42_A mol:protein length:236 Alr3090 protein  ali model follow..  9  18........NPRFAQLLLEQFGGELSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEAYKSTLFAV--TASYLNEGGDVVRDLRANIAAEAGARQTYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLG 178
11 -20.3005xx9_A mol:protein length:167 Bacterioferritin  ali model follow..  16  1.....MQGDPEVIEFLNEQLTAELTAINQYFLHAKLQDHTKLAKYTRAESFDEMRHAEVLTDRILLLDGLPN------------YQRLFHVRVGQSVTEMFQADREVELEAIDRLRRGIEAKHDITSANVFEAILADEEHHIDYLETQLDLIE 142
12 -20.0003bkn_A mol:protein length:161 Bacterioferritin  ali model follow..  15  1.....MQGDPDVLKLLNEQLTSELTAINQYFLHSKMQDNTELAEHTRAESFEEMRHAETITDRILLLDGLPN------------YQRLFSLRVGQTLREQFEADLAIEYEVLERLKPGIVEKQDATSARLLEQILADEETHIDYLETQLQLMD 142
13 -20.0003gvy_A mol:protein length:161 Bacterioferritin  ali model follow..  17  1.....MQGDAKVIEYLNAALRSELTAVSQYWLHYRLQEDGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPN------------LQRLNPLRIGQTLRETLDADLAAEHDARTLYIEARDKVRDYPSKMLFEELIADEEGHIDYLETQIDLMG 142
14 -19.9001jgc_A mol:protein length:161 bacterioferritin  ali model follow..  16  1.....MKGDAKVIEFLNAALRSELTAISQYWVHFRLQEDAKMAKKSREESIEEMGHADKIIARILFLEGHPN------------LQKLDPLRIGEGPRETLECDLAGEHDALKLYREARDEVGDIVSKNIFESLITDEEGHVDFLETQISLYD 142
15 -19.9001nf4_A mol:protein length:179 bacterioferritin  ali model follow..  17  2.AGNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDGELAANMKLIAIDEMRHAENFAERIKELGGEPT------------TQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIK 147
16 -19.8001sof_A mol:protein length:156 Bacterioferritin  ali model follow..  18  1.....MKGDKIVIQHLNKILGNELIAINQYFLHARMYEDEKLGKHEYHESIDEMKHADKLIKRILFLEGLPN------------LQELGKLLIGEHTKEMLECDLKLEQAGLPDLKAAIASVGDYASRELLEDILESEEDHIDWLETQLDLID 142
17 -19.8004am2_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  19  1.....MKGDQKVIEYLNRGLRSELTAVSQYWLHYRMLEDKDLAKKWRAESIEEMAHADKFVERILFLEGLPN------------LQTLDPLRIGQTVKEVLESDLAAEREARALYQEGAASVGDFPSKNLFEELMGDEEHHIDFLETQLDLVS 142
18 -19.8003fvb_A mol:protein length:182 Bacterioferritin  ali model follow..  20  15....SMKGEPKVIERLNEALFLELGAVNQYWLHYRLLNDTRLAKKEREESIEEMHHADKLIDRIIFLEGFPN------------LQTVSPLRIGQNVKEVLEADLKGEYDARASYKESREKLGDYVSKQLFDELLADEEGHIDFLETQLDLLA 157
19 -19.7003e2c_A mol:protein length:158 Bacterioferritin  ali model follow..  19  1.....MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNKRLNDVEYHESIDEMKHADRYIERILFLEGLPN------------LQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGSVHDYVSRDMMIEILRDERGHIDWLRTELDLIQ 142
20 -19.6004cvp_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  18  1....AMKGDTKVINYLNKLLGNELVAINQYFLHARMFKNKRLNDVEYRESIDEMKHADRYIERILFLEGLPN------------LQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGSVRDYVSRDMMIEILRDEEGHIDWLETELDLIQ 143
21 -19.6001bcf_A mol:protein length:158 BACTERIOFERRITIN  ali model follow..  18  1.....MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNKRLNDVEYHESIDEMKHADRYIERILFLEGLPN------------LQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQ 142
22 -19.6004tof_A mol:protein length:158 Bacterioferritin  ali model follow..  17  1.....MKGDKKVIQHLNKILGNELIAINQYFLHSRMWNDKRLGAHEYHESIDEMKHADKLIERILFLEGLPN------------LQDLGKLLIGENTQEMLQSDLNLELCATKDLREAIVQVHDYVSRDLLKDILESEEEHIDYLETQLGLI. 141
23 -19.4005zur_A mol:protein length:158 Bacterioferritin  ali model follow..  18  1.....MKGDKTVIQFLNKQLTNELTAINQYFLHARMLNHDKLGKHEYEESIGEMKHADRLIARIFMLDGLPN------------LQDLHKLLIGEDVPELLACDLKLEQAAHATVREAIASVRDYVSRDLFQDILDDTEEHIDYLETQIDLI. 141
24 -19.4003is7_A mol:protein length:158 Bacterioferritin  ali model follow..  17  1.....MKGDKKVIQHLNKILGNELIAINQYFLHSRMWNDKRLGAHEYHESIDEMKHADKLIERILFLEGLPN------------LQDLGKLLIGENTQEMLQCDLNLELKATKDLREAIVQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQ 142
25 -19.2005d8x_A mol:protein length:158 Ferroxidase  ali model follow..  17  1.....MKGDKKVIQHLNKILGNELIAINQYFLHSRMWNDKRLGAHEYHESIDEMKHADKLIERILFLEGAPN------------LQDLGKLLIGANTQEMLQCDLNLELKATKDLREAIVQVHDYVSRDLLKDILESEEEHIDYLETQLGLI. 141
26 -19.2002ib0_A mol:protein length:170 CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN  ali model follow..  9  12.PKRSPSEGSADNAALCDALAVEHATIYGYGIVSALS-PPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAA----------GYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWP 152
27 -18.9003q4n_A mol:protein length:193 Uncharacterized protein MJ0754  ali model follow..  11  6SSLPKQPISEEEKEGLIEMREEEKLARDVYLTLYNKWKLQ----IFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYG 158
28 -18.8003q4o_A mol:protein length:196 Uncharacterized protein MJ0754  ali model follow..  10  19........SEEEKEGLIEMREEEKLARDVYLTLYNKWKLQ----IFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYG 163
29 -18.3004di0_A mol:protein length:144 Rubrerythrin  ali model follow..  11  1GPSMAQLKGSKTEENLKYAFAGESQANRRYLYFASKADVNDIAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPF-----------------GTSRQNLQSAIAGETHEYTDMYPGMAKDEGFEEIANWFETLAKAERSHANRYTKALDGL. 142
30 -18.2001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  10  1...MKDLKGTKTAENLKQGFIGESMANRRYLYFAKRADEPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDP---------------ATDKPIGTLEQMIESAIAGETYEWTQMYPGFAKEEGFPEVAEWFETLARAEKSHAEKFQNVLKQL. 140
31 -17.2003r2h_A mol:protein length:154 Bacterioferritin  ali model follow..  14  1.....MQGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDSKLYERLNHEMEEETQHADALLRRILLLEGTPR-------------MRPDDIHPGTTVPEMLEADLKLERHVRAALAKGIAQHKDFVSRDILKAQLDTEEDHAYWLEQQLGLI. 141
32 -16.5005hjf_A mol:protein length:185 Ferritin, Dps family protein  ali model follow..  8  23..LLDRSVTAPVTEGFNVVLASFQALYLQYQKHHFVVEGSSLHEFFNESYNQVQDHIHEIGERLDGLGGVPVATFSKLAELTCF----QESEGVYSSRQMVENDLAAEQAIIGVIRRQAASLGDRGTRYLYEKILLKTEERAYHLSHFLAKDS 176
33 -16.3001moj_A mol:protein length:182 Dps-like ferritin  ali model follow..  13  22...MDADRAEQCVDALNADLANVYVLYHQLKKHHWNVEGADLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASV----VEDEDVYDIRTSLANDMAIYGDIIEATREHTENLGDHATAHMLREGLIELEDDAHHIEHYLEDDT 174
34 -16.1001n1q_A mol:protein length:149 DPS Protein  ali model follow..  13  1...MKTSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEE----ASIKEATGGESAAEMVSSVVNDFVDLVGELKVARDEADDEATADMLDAIEAGLEKHVWMLEAFLE... 149
35 -15.7001jig_A mol:protein length:146 Dlp-2  ali model follow..  13  1......STKTNVVEVLNKQVANWNVLYVKLHNYHWYVTGPTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSS----VNEGTSKESAEEMVQTLVNDYSALIQELKEGMEEAGDATSADMLLAIHTTLEQHVWMLSAFLK... 146
36 -15.7002cf7_A mol:protein length:165 DPR  ali model follow..  12  9..FSPRPSLADSKAVLNQAVADLSVAHSILHQVHWYMRGRIWHPKMDEYMEEIDGYLAEMSERLITLGGAPF--STLKEFSENSQLKEVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQAP 163
37 -15.7002vxx_A mol:protein length:192 STARVATION INDUCED DNA BINDING PROTEIN  ali model follow..  8  21...LEKATTTPICEGMNRLLASFQALYLQYQKHHFVVEGAPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALCCF----PEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATSLGDRATAYLYDQILLKTEERAYHIGHFLANDS 173
38 -15.7005n5e_e mol:protein length:99 PFC_05175  ali model follow..  15  15.....PYTKEELMEILRLAIIAELDAINLYEQMARYSEDENVRKILLDVAREEKAHVGEFMALLLNLDPE................................................................................... 79
39 -15.5002qf9_A mol:protein length:179 Putative secreted protein  ali model follow..  8  1...MSLAADSADAGFARDMSVHHQQAVEMSYIVRDRTDDEEVRRLAYDIAQTQANQRGMMIGWLDLWALPKVSSDPPMTATDAEMKKLGTLDGKQAEVYYLQLMTEHHRGGVHMAKGCVERCTVGVEKRLARGMVESQESEIRLMADLLAE.. 167
40 -15.4002c41_A mol:protein length:158 DPS FAMILY DNA-BINDING STRESS RESPONSE PROTEIN  ali model follow..  13  2..SATTTLKEQVLTTLKREQANAVVMYLNYKKYHWLTYGPDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKV----ATVTPSSGQLTVKQMIEEAIANHELIITEMHQDAEEAGDIGTADLYTRLVQTHQKHRWFLKEFLAK.. 152
41 -15.4002d5k_A mol:protein length:156 Dps family protein  ali model follow..  16  1...MA-SNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSI----VKEAAKGYSAEQMVEELSQDFTNISKQLENAIENAGDDVSEDMFIGMQTSVDKHNWMFKSYLSL.. 149
42 -15.3002rbd_A mol:protein length:171 BH2358 protein  ali model follow..  9  1..GMGILSGNPQDEPLHTYLSTNNGLINGYRSFINHTGDEDLKNLIDEAIQAMQDENHQLEELLRSNGVGLPPAPPDRPAARLDDIPVGARFN---DPEISATISMDVAKGLVTCSQIIGQSIREDVALMFSQFHMAKVQFGGKMLKLNKNKG 156
43 -15.3002xgw_A mol:protein length:199 PEROXIDE RESISTANCE PROTEIN  ali model follow..  17  35..KKEASKNEKTKAVLNQAVADLSVAASIVHQVHWYMRGPYLHPKMDELLDSLNANLDEVSERLITIGGAPY--STLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGLDEEGDAGTNDLFTAAKTEAEKTIWMLQAERGQGP 189
44 -15.2002hz8_A mol:protein length:115 De novo designed diiron protein  ali model follow..  10  23.KKAKEGDEQELARLIQEIVKAEKQAVKVYKEAAEKARNPEKRQVIDKILEDEEKHIEWLKAASKQG...................................................................................... 88
45 -15.2003sid_A mol:protein length:180 Symerythrin  ali model follow..  12  20.....AVSHNNTDANAASSIEVEYECDCMYAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASRGLRRALETALEVETIESQKFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENL. 176
46 -15.1001yux_A mol:protein length:202 Nigerythrin  ali model follow..  12  22....SKTSVGSTLENLKAAIAGETGAHAKYTAFAKAAREEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKP------------TVAAPSAYSCDLNLISGANGEIYETSDMYPAFIREEGNSKAVHVFTRAKLAESVHAERYLAAYND.. 162
47 -15.1004eru_A mol:protein length:170 YciF Bacterial Stress Response Protein  ali model follow..  11  2.NAMNIKTVEDLIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESGIKLMKCVAMEGLIEEANEVIESTEKNEDAALIAAAQKVEHYEIASYGTLATLA--SKALKLLKETLDEEKQTDLKLTDLAVS.. 159
48 -15.0002gs4_A mol:protein length:166 Protein yciF  ali model follow..  10  1...MNMKTIEDVIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIMKCVAMEGLIEEANEVIESTEKNEDAALIAAAQKVEHYEIASYGTLATLA--RKAAKLLKETLEEEKATDIKLTDLAIN.. 156
49 -15.0005xgo_A mol:protein length:200 DNA protection during starvation protein,Bacterioferritin  ali model follow..  8  28..DVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGAAVHEMLDGFRTALIDHLDTMAERAVQLGGVAL---GTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIECNLDLIQ 178
50 -14.9003ogh_B mol:protein length:171 Protein yciE  ali model follow..  12  1.SNAMNR-IEHYHDWLRDAHAMEKQAESMLESMASRIDNPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAA-DTASIPTIEAILNEEKHMADWLIQHIPQTT 155
51 -14.8002e0z_A mol:protein length:345 Virus-like particle  ali model follow..  9  13....KPYTKEELMEILRLAIIAELDAINLYEQMARYSEDENVRKILLDVAREEKAHVGEFMALLLNLDPEGFEEVKELTGIEAHINDNKKEESNVEYFEKLRSALLDGVNKGRSLLKHLPVTRIEGQSFRVDIIKFEDGVRVVKQEYK..... 163
52 -14.7002gyq_A mol:protein length:173 ycfI, putative structural protein  ali model follow..  12  1GHMGFFSRDIQTMEDLRDIYYAEQQITKALPKMIEQATNRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAIDGLIKEADETAGEIADKDAAIVANAQAVEHYEIARYGTLIAWA--DDIVRFLTTNLNEEKAANTKLNTVALRKG 164
53 -14.6001b71_A mol:protein length:191 PROTEIN (RUBRERYTHRIN)  ali model follow..  8  1...MKSLKGSRTEKNILTAFAGESQARNRYNYFGGQAKKVQISDIFAETADQEREHAKRLFKFLEGGDLEIVA-------------AFPAGIIADTHANLIASAAGEHHEYTEMYPSFARIAREEEIARVFASIAVAEEFHEKRFLDFARNIK 143
54 -14.6003hiu_A mol:protein length:166 Uncharacterized protein  ali model follow..  13  4........RERLVKWLQDAYAMEKEAETMMAAMASRIEHPELKRRIEQHVEETQQQSAGVQRCLELLNGSIPTAKGMLSSVLASMHAAGNSMMTDEVTKGVGISYAFEHLEIASYRALVVAA-EQEVAQICEDILQQEIEMAEWLIEHQEAIV 152
55 -14.6003k6c_A mol:protein length:95 Uncharacterized protein NE0167  ali model follow..  11  12....ELSDETRDMHRAIISLREELEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRC...................................................................................... 74
56 -14.5001umn_A mol:protein length:165 DPS-LIKE PEROXIDE RESISTANCE PROTEIN  ali model follow..  13  9..FSPRPSLADSKAVLNQAVADLSVAHSILHQVHWYMRGRIWHPKMDEYMEEIDGYLDEMSERLITLGGAPF--STLKEFSENSQLKEVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQAP 163
57 -14.3001ji5_A mol:protein length:142 Dlp-1  ali model follow..  16  1..........QVIEVLNKQVADWSVLFTKLHNFHWYVKGPTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEI----SSIQEAAYGETAEGMVEAIMKDYEMMLVELKKGMENSDDEMTSDLLLGIYTELEKHAWMLRAFLN... 142
58 -14.2005ffa_A mol:protein length:204 CopM  ali model follow..  8  41....GMHMQWTDQSFIEMMTPHHQDAIDMAEMALQKAEHPELKKLARNIIRDQEREIKEMKTWYQQWFKRPVPALS-QGHGMMAMDLDALATAQNFDREFIRQMIPHHQMAVMMASNLKTNTERPEMDKLMDDIIRSQSAEIKQMKQWYQN.. 194
59 -14.2003iq1_A mol:protein length:159 DPS family protein  ali model follow..  16  10..GLDTTQSQKLANALNNLLANYQVFYMNTRGYHWNIQGKELHAKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKA----AQIKEHTDSIDGRSSMQGLVDGFSILLHQQRDILEETGDEGTSALMSDYIREQEKLVWMLNAWLK... 159
60 -14.1001qgh_A mol:protein length:156 NON-HEME IRON-CONTAINING FERRITIN  ali model follow..  16  1...MKTINSVDTKEFLNHQVANLNVFTVKIHQIHWYMRGHTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPF--STLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIEKEGDDVTNDMLIAFKASIDKHIWMFKAFLGKAP 154
61 -14.1004a25_A mol:protein length:169 FERRITIN DPS FAMILY PROTEIN  ali model follow..  6  17...TGFDASSRLNAGLQEVLVDLTALHLQGKQAHWNIVGEDLHLQLDTLVEAARGFSDDVAERMRAVGGVPDARPQTVAAS----RIGDVGPDEIDTRACVEAIVALVRHTVDTIRRVHDDAEDPASADLLHAITLELEKQAWMIGSENRS.. 165
62 -14.0003bt5_A mol:protein length:177 Uncharacterized protein DUF305  ali model follow..  11  17...............VQHMLQHHAQALDLAAPMLERSQQRTVRSLALDIQLSQREQMRQMEAMLGRWGQPPGEPISPEHA-EAEVAGLSTLPVEQAERQFLRLMIRHHQGAVAMTLPMLDAAARPEVERLARQIVVTQRGEIRTMEGVLGR.. 158
63 -13.7002iy4_A mol:protein length:156 NON-HEME IRON-CONTAINING FERRITIN  ali model follow..  16  1...MKTINSVDTKEFLNHQVANLNVFTVKIHQIHWYMRGHTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPF--STLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYQQGIEKEGDNVTNDMLIAFKASIDKHIWMFKAFLGKAP 154
64 -13.7002bjy_A mol:protein length:156 NON-HEME IRON-CONTAINING FERRITIN  ali model follow..  16  1...MKTINSVDTKEFLNHQVANLNVFTVKIHQIGWYMRGHTLGEKMDDLYSEFGEQMDEVAERLLAIGGSPF--STLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIEKEGDDVTNDMLIAFKASIDKHIWMFKAFLGKAP 154
65 -13.6002chp_A mol:protein length:153 METALLOREGULATION DNA-BINDING STRESS PROTEIN  ali model follow..  11  5...NAKTNQTLVENSLNTQLSNWFLLYSKLHRFHWYVKGPTLHEKFEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEH----ASITDGGNETSASEMVQALVNDYKQISSESKFVIGENQDNATADLFVGLIEEVEKQVWMLSS...... 150
66 -13.6004z5s_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  11  11.DYSSEIYKDAYSRINAIVIEGEQEAYSNYLQMAELL--PEDKEELTRLAKMENRHKKGFQACGNNLQVNPDMPYAQEFFAGLHGNFQHAFSEGKVVTCLLIQALIIEAFAIAAYNI-YIPVADDFARKITEGVVKDEYTHLNYGEEWLKANF 159
67 -13.5005uxi_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  11  12.DFKSETYKDAYSRINAIVIEGEQEAHENYITLAQLL--PESHDELIRLSKMESRHKKGFEACGRNLAVTPDLQFAKEFFSGLHQNFQTAAAEGKVVTCLLIQSLIIECFAIAAYNI-YIPVADDFARKITEGVVKEEYSHLNFGEVWLKEHF 160
68 -13.5004quw_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  11  11.DFQSESYKDAYSRINAIVIEGEQEAFDNYNRLAEML--PDQRDELHKLAKMEQRHMKGFMACGKNLSVTPDMGFAQKFFERLHENFKAAAAEGKVVTCLLIQSLIIECFAIAAYNI-YIPVADAFARKITEGVVRDEYLHRNFGEEWLKANF 159
69 -13.4002c2f_A mol:protein length:207 DNA-BINDING STRESS RESPONSE PROTEIN  ali model follow..  13  53...LEEKEFQTVAETLQRNLATTISLYLKFKKYHWDIRGRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYSTV----VPQETVRDARTQVADLVQDLSRVGKGYRDDSQEANDPVTADMYNGYAATIDKIRWMLQAIMDDER 205
70 -13.3002fjc_A mol:protein length:156 Antigen TpF1  ali model follow..  12  6...PDARAIAAICEQLRQHVADLGVLYIKLHNYHWHIYGIQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGI----EETEKEITIVSALARVKRDFEYLSTRFSQTQVESGDAVTDGIITDILRTLGKAIWMLGATLKA.. 156
71 -13.3001dps_A mol:protein length:167 DPS  ali model follow..  8  20..DVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGAAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPL----SYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIECNIE... 167
72 -13.3002c2j_A mol:protein length:211 DNA-BINDING STRESS RESPONSE PROTEIN  ali model follow..  9  39..AAGTEDLKKSVQALQNTLTELQALQLQTKQAHWNVSGTTLHELLQDHYEGISKFADDVAERQLSVGASSDGRAITIVAASRL----EIPGGFLDDAQVIQFFTYQYETVGQRIHQRVGEKVDPTTANLLQEVEHIIEKYQWQMRAFLQNTP 191
73 -13.2003ge4_A mol:protein length:173 DNA PROTECTION DURING STARVATION PROTEIN  ali model follow..  8  14..DLPSNTKTTMIALLNENLAATIDLALITKQAHWNLKGPAVHEMLDGFRAELDDHVDTIAERAVQIGGTAYGTTQVVVKESRL----PYPTDIYAVHDHLVALIERYGDVANLVRKSIKDAGDDDTADIFTAASRSLDKALWFLEAHVQESN 167
74 -13.2005n5f_A mol:protein length:98 encapsulated ferritin  ali model follow..  7  13....LLSEETKNMHRALVTLIEELEAVDWYQQRADACSEPGLHDVLIHNKNEEVEHAMMTLEWIRRR...................................................................................... 75
75 -13.2005da5_A mol:protein length:116 Rru_A0973  ali model follow..  8  15.....LKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILAHNRDEEKEHAAMTLEWLRRN...................................................................................... 76
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.