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Query: 4nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSGVDLGTENLYFQSMLEEDKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQIESNVLEDFEFPKDERNILSFHEVKHFEKMLKGDAGAKTDNTPKESMTSVISDSVKLSEAEFTYLSQYISPEHLSSKGIEKLQKQFVENSSLQIESFLNDDKSELLKKVIKQKELEQECPYHSKDVKAPWKTAIPPHKARYLYIDGKEYRNFQTEADILEALNNNDLPNFQFTKDAIKIISDASGNSRENNFDAELALIDLAVFHKSTIFKKYLALLTSLCPVSEQILIRRFRPGMDFTLATKCRFNELLKSNPDIIDAVLEGTLCLTPSAGWESGELGGYELYMMDDDEDNKQYLKEDVEDASVYRADDSGDSVLINDPPAWNTFNLVLRDESVLEFVKYVSWSAKSSRWDVKMKWDVKSCDEDGQEDEALast
1 -179.0004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model  100  1MSSGVDLGTENLYFQSMLEEDKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQIESNVLEDFEFPKDERNILSFHEVKHFEKMLKGDAGAKTDNTPKESMTSVISDSVKLSEAEFTYLSQYISPEHLSSKGIEKLQKQFVENSSLQIESFLNDDKSELLKKVIKQKELEQECPYHSKDVKAPWKTAIPPHKARYLYIDGKEYRNFQTEADILEALNNNDLPNFQFTKDAIKIISDASGNSRENNFDAELALIDLAVFHKSTIFKKYLALLTSLCPVSEQILIRRFRPGMDFTLATKCRFNELLKSNPDIIDAVLEGTLCLTPSAGWESGELGGYELYMMDDDEDNKQYLKEDVEDASVYRADDSGDSVLINDPPAWNTFNLVLRDESVLEFVKYVSWSAKSSRWDVKMKWDVKSCDEDGQEDEA 641
2 -174.0003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  97  1MKRKTAEEKERNSKQISLEEDKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQIESNVLEDFEFPKDERNILSFHEVKHFEKMLKGDAGAKTDNTPKESMTSVISDSVKLSEAEFTYLSQYISPEHLSSKGIEKLQKQFVENSSLQIESFLNDDKSELLKKVIKQKELEQECPYHSKDVKAPWKTAIPPHKARYLYIDGKEYRNFQTEADILEALNNNDLPNFQFTKDAIKIISDASGNSRENNFDAELALIDLAVFHKSTIFKKYLALLTSLCPVSEQILIRRFRPGMDFTLATKCRFNELLKSNPDIIDAVLEGTLCLTPSAGWESGELGGYELYMMDDDEDNKQYLKEDVEDASVYRADDSGDSVLINDPPAWNTFNLVLRDESVLEFVKYVSWSAKSSRWDVKMKWDVKSCDEDGQEDEA 644
3 -171.0003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  100  2.................LEEDKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQIESNVLEDFEFPKDERNILSFHEVKHFEKMLKGDAGAKTDNTPKESMTSVISDSVKLSEAEFTYLSQYISPEHLSSKGIEKLQKQFVENSSLQIESFLNDDKSELLKKVIKQKELEQECPYHSKDVKAPWKTAIPPHKARYLYIDGKEYRNFQTEADILEALNNNDLPNFQFTKDAIKIISDASGNSRENNFDAELALIDLAVFHKSTIFKKYLALLTSLCPVSEQILIRRFRPGMDFTLATKCRFNELLKSNPDIIDAVLEGTLCLTPSAGWESGELGGYELYMMDDDEDNKQYLKEDVEDASVYRADDSGDSVLINDPPAWNTFNLVLRDESVLEFVKYVSWSAKSSRWDVKMKWDVKSCDEDGQEDEA 625
4 -106.0004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  19  28.VGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFS-HEVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRR----------EPHISTLRKILFEDFRSWLSDISKIDLE--STIDMSCAKYEFTDALLCHDDELEGRR---IAFILYLVPPWDRSMGGTLDLYSIDEHF-QPKQIVKSLIPSWNKLVFFEV-SPVSFHQVSEVSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPH----------------------------------------------------------------IPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVE-------------WSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLATSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEF-----------ALDLILYCGCEG--WEPEYGGFTSYIA-----------------------KGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQFWDFSFIYYE............ 556
5 -57.1005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  12  4...........................EEALPSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHAVIRHCAGRLGSYKINGRTKAMVACYPGNGLGYVRHVDNPHGDG-RCITCIYYLNQNWDVKVHGGLLQIFPEGR-----PVVANIEPLFDRLLIFW-SDRRNPHEVKP--AYATRYAITVWYFDADERARAKDKYQLASGQKGVQVPVSQ................................................................................................................................................................................................................................................................................................................................................................................... 239
6 -54.4002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  12  13.................................KLALEYIVPCM---NKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDG-RCVTCIYYLNKDWDAKVSGGILRIFPEGK-----AQFADIEPKFDRLLFFW-SDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKGVRVELN...................................................................................................................................................................................................................................................................................................................................................................................... 236
7 -54.3004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  11  1.......................GSQTKPLPALKLALEYIVPCM---NKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDG-RCVTCIYYLNKDWDAKVSGGILRIFPEGK-----AQFADIEPKFDRLLFFW-SDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKGLRVELNKPS................................................................................................................................................................................................................................................................................................................................................................................... 237
8 -53.8004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  14  1...........MGSSSSGLVPRGSHMASHISPEHPMLAAVVDDL---ATHGWSQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATQEVRETIRGDQIQWIDPGQAEACDQYL--AAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRFRDDDRRMVSAVLYLNEGWQPHDGGQLRMFLADGV-------EHDVEPVAGCLVVFL--SGEVPHEVLPA--GRERLSLTGWFRRRGND......................................................................................................................................................................................................................................................................................................................................................................................................... 221
9 -53.4002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  11  5...............................ALKLALEYIVPCM---NKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDG-RCVTCIYYLNKDWDAKVSGGILRIFPEGK-----AQFADIEPKFDRLLFFW-SDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPS................................................................................................................................................................................................................................................................................................................................................................................... 233
10 -52.0005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  11  17................................LKLALEYIVPAM---NKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSDDLICHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNCNGDG-RCVTCIYYLNKDWDAKVSGGILRIFPEGK-----AQFADIEPKFDRLLFFW-SDRRNPHEVQP--AYATRYAITVWYFDADERAAAKVKYLTGEKGVRVELNKPS................................................................................................................................................................................................................................................................................................................................................................................... 244
11 -51.9002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  11  18.................................KLALEYIVPCM---NKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDG-RCVTCIYYLNKDWDAKVSGGILRIFPEGK-----AQFADIEPKFDRLLFFW-SDRRNPHEVQPA--YATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPS................................................................................................................................................................................................................................................................................................................................................................................... 244
12 -51.4006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  12  1MGSSSSGLVPRGS-RPKIGCDKTGLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNG--QLARNVSVNRIRGDKIAWIGGDERGCEAIKYLSSDSLISRCNGRLGNYMITGRTKCMVACYPGSGLGYIRHIDNPNRDG-RCVTVLYYLNPNWNSQDCGGQLWLYPNNE-----NKVVKIDPIFDRLLLFW-SDRRNPHEVKP--AYAMRYAITLWYFDEKERALSSQNG.................................................................................................................................................................................................................................................................................................................................................................................................. 250
13 -51.0005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  11  17................................LKLALEYIVPCM---NKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSDDLVLHCNGKLGSYKVNGRTKAMVACYPGNGTGYVRHVDNPNGDG-RCVTCIYYLNKDWDAKVSGGILRIFPEGK-----AQFADIEPKFDRLLFFW-SDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPS................................................................................................................................................................................................................................................................................................................................................................................... 244
14 -31.3005iqs_A mol:protein length:315 WelO5  ali model follow..  16  1MKSDYDPTTENLYFQGSMSNNTVSTKPALHFLDKKYPTAIQDIIINRS-FDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGHAIVGQSPDLKDYFASSAIFRQACRTMFQEQVESIFHSLSGLPVEIPTGTPATIRLLLEGREIAVHVGNDFLDLSDQLSYFIPLT---VPEAGGELVVYSLEWNPQEASKYSVAYAPGPGDMLLFN--GGRYYHRVSEVIGNSPRRTIGGFLAFSKQRD........................................................................................................................................................................................................................................................................................................................................................................................................ 302
15 -25.7003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  13  1....................................MGSDKIENLYFQG-MLIEIPNVFSKQEVSHLREQLDAR---RWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPP-------LFNRYQGGETFGYHIDNAMIRTDLSATLFLSEPENYQ---GGELVIQDTYGQ--------QSIKLSAGSLVLY---PSSSLHQVTPVLSGE-RTAAFMWLQSM............................................................................................................................................................................................................................................................................................................................................................................................................ 190
16 -24.5003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  8  1MQHTYPAQLMRAARAEHMTIAAAIHALDADEAD-------------------AIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATS-VTLGQLQREQGDKLVSKAAEYFG--IACRVNDGLRTTRFVRLFSDALDAKPLTIGHDYE-FAPHCDDVSYGRPRQLGGFLTIQ---GADNDAGMVMWDNRPESRAALDEMHMLKPQPGQLTLF---QSKNLHAIERC--TSTRRTMGLFL............................................................................................................................................................................................................................................................................................................................................................................................................... 262
17 -23.0006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  11  1MGSSGLVPRGSVPTEVTLYD-TRKEEWEKKYLHPEFLSHLQNFKDFTEICNDVYSFPLFTPAFCKEVIEVMDKANLW---SKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDIN-LAFVVKYDMQSELAPHHD---SSTYTLNIALNEYGKEYT---AGGCEFIRHKF---------IWQGQKVGYATIHA-GKLLAYHRALPITSGK-RYILVSFVN.............................................................................................................................................................................................................................................................................................................................................................................................................. 229
18 -21.3005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  11  2....................GSSSSGLVPRGSHMEGFETSDRPGVCDGKY-YEKIDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGEH--------VIDKIQKKTREFLNSKKHCIDKYDVQVARYKPGQYYYHHYDGDDCDDARLATLMVYLKA---EEGGGGETDFP---------TLKTKIKPKKGTSIFFRKLYKETLHAGLPVKSG-EKIIANQWIRAVK........................................................................................................................................................................................................................................................................................................................................................................................................... 222
19 -19.4005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  10  28....................................DREIQIISKFEEPL-IVVLGNVLSDEECDELIELSKSKLARS-------KVGSSRDVNDIRTSSGAFLDDNELTAKIEKRI---------SSIMNVPASHGEGLHI--LNYEVDQQYKAHYDYFAEHSRRISTLVMYLN---DVEEGGETFF----------PKLNLSVHPRKGMAVYFESLNELTLHGGAPVTKG-EKWIATQWVRRGT........................................................................................................................................................................................................................................................................................................................................................................................................... 215
20 -19.4002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  8  11....................................EWRGEVVHLSWSPR-AFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTG-------------TWFAKGEDSVISKIEKRVAQVTMIPLENHELQVLHYHDGQKYEPHYDYFHDPVNRVVTMLMYLT---TVEEGGEAEQKVTGDGWSECAKRGLAVKPIKGDALMF-SNDPASLHGSCPTLKG-DKWSATKWIHVAP........................................................................................................................................................................................................................................................................................................................................................................................................... 222
21 -17.9004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  10  1.........................MTTATLDRAAAIERFRRD-------GFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWERDLLHREELAQLAAAFVD-GPVVPTAYALVLKEPYRAAEVPWHRDRVNVGPRTVCNLSICLDD--AGPHNGCLEAVPAEVAKVRATGPVVPVPVSQGDVVVH---DVRLVHGSGPNANGSWRRTIVIEYADPA........................................................................................................................................................................................................................................................................................................................................................................................................... 218
22 -17.3003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  10  7..............................................VTRLYHAPLSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYASLTDLPWRF-PIFADLVKSL-DAHVAAFAEDLEDLDGRALELEDLWINILPEGGSHASHI-----HPHSVISGTTYVS---MPGGTSALKLEDPRHTARDELRQFIYVTPAVGDVLLW---ESWLRHEVPMNMSEDDRISVS.................................................................................................................................................................................................................................................................................................................................................................................................................. 198
23 -17.1005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  10  1MGSSSSGLVPRGSHMPPI----------RRVNASQGSDAAYQILQED---GCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRD--ELLNLPFAHEVLEKVFKKDSGDYWLNMGNILNMLPGA--RPHRDD-ATSPDLMINITFPLN-EFRHDNGGTLLL--PNADFYANAEDLPAAEMQVGDALIF---TGKCVHGGGANRSDKPRIGLALAA............................................................................................................................................................................................................................................................................................................................................................................................................... 238
24 -16.9002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  11  1.................MSLAQIKSLF-------------------ATRLYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTS-YASLTDLPWRFPIFADLVKSL-DAHVAAFAEDLEELDGKALRLEDIWINILPEGGVHGSHI-----HPHSVISGTTYVA----PEGTSALKLEDRRKGAREELRTFRSVAPKVGDVLLW---ESWLRHEVPMNMAEEDRISVS.................................................................................................................................................................................................................................................................................................................................................................................................................. 202
25 -16.8005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  13  2....................PTITETSKPTLRRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDEL------MNDELLHGLCKRLFGPESGDYWLTTSSVLETEPGY--ELHREH-RQSPESMLNFLTALT-DFTAENGATRVLWEDFSAPPPKADTAIPAVMNPGDAVLF---TGKTLHG-KNNTTDFLRRGFPLIMQSCQFTPVEASVALPRELVETMTPLAQKM.................................................................................................................................................................................................................................................................................................................................................................................. 258
26 -16.6004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  10  7MTSQHQEHTGTKRFSIQSDPVEIHRAIVED--------------------GVAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLADFIPDHVARVHNLVDFRHEILNHELLHKICRLTFEESGDYWLGYGAVIENGPGT----HRDQ-PDAPEGMLNFFTALTD---DAETGKTQYILVELGEPDADHPIEYVGLKPGDTTIV---SGKITHRGSDNRSDKMRRAMPIMIIPSILTPFDATCHLSRELVETMTPLAQKM.................................................................................................................................................................................................................................................................................................................................................................................. 270
27 -16.4002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  10  1.........SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEEN-------GFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQELFRYCTLPEILKYVECFTG-PNIMAMHTMLINKPPDSGKKTSRHPLHQDRPSDLIVCAWTAMEH--ISRNNGCLVVLPGTHKDYEENKARVHLVMEKGDTVFF---HPLLIHGSGQNKTQGFRKAISCHFASAD........................................................................................................................................................................................................................................................................................................................................................................................................... 256
28 -15.1005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  10  2......GSSSSGLVPRGSHMPSRLQKFPATAPADEIYAAFKED-------GCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVT--RVKRFSKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGMGYHFNDTMVIEVQPGAPAQRLHRDQELYPWWNSMGPDAPECLVNFFCAVTP---TVENGATRLVPATDCPQYGKIDSVPAIMQPGDCYMM---SGKVIHG-HNATLSDQRRALAFST............................................................................................................................................................................................................................................................................................................................................................................................................... 243
29 -14.9004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  6  2....................PEFTVDSKPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLHFKYVPNVATTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFLR------------EIESGMPAQPFHRDD-LEAPPVSLSVIFPLT-EFTEENGATEVIHRWTEVGTPERDQAVLATMDPGDVLIV---RQRVVHGGNRTTAGKPRRVVLAYF............................................................................................................................................................................................................................................................................................................................................................................................................... 228
30 -14.7004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  9  7...............................LTREQLYIFDTT-------GFLVIPGVFGSGEVESFRSELERLDTVDPGFPRTRRYPDLPAASPV----FARLALDDRLLAPVRDVVNQPLRLLEGYGLRRTKDSVLYLHGGNSELLDLGDRQVGRDLSITHTYHYVKALVYLSDIQSPEDGS-FCYVQGSHKADSGFPTLSDVFVRSGDVLLL---NEALMHGTRRKLTEGDRLLTAFGYGPTFFTEWRELDAETADLRGAGYVDHDVEEDFV.............................................................................................................................................................................................................................................................................................................................................................................. 260
31 -14.7004xab_A mol:protein length:252 EvdO2  ali model follow..  7  1......................MDAMEVVGTIDHRDREEFRSR-------GFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKYVPLLDSPHFARCRSIASAFLDMEEELEFYGHAILKPPRYGAPTPWHQDEA-RWRRRGLSIWTTLDE--ATVESGCLHYLPGGHRGDVDPTSAVACPLAPGGAVVH---DFRTPHYAGPNLTDQPRRAYVLVFMSAP........................................................................................................................................................................................................................................................................................................................................................................................................... 237
32 -14.6003emr_A mol:protein length:310 EctD  ali model follow..  11  7.SRQNNQPKILKRKDPVIYTDRSKD--NQAPITKEQLDSYEKN-------GFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPESNDIRSIFHVHQDD-----NYFQDVANDKRILDIVRHLLG-SDVYVHQSRINYKPGFKGKEFDWHSDF---PRMRAISVSIALSD--NYSFNGPLMLIPGSHNYTRIGGGISVPTGKAGSVTLF---ESNTMHGSTSNITPYPRNNLFMVYNSVK........................................................................................................................................................................................................................................................................................................................................................................................................... 270
33 -14.6004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  8  9.....SRQRADAEMRPRLDPVVHSEWTNDAPISARQAAAFDRD-------GYIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQSNEIRSIFEIHAQSP-----VMARLAADARLADVARFLLG-DEVYIHQSRLNYKPGFKGREFYWHSDF---PRMRALSMSVLLAE--NTPHNGPLMVIPGSHRELAHRHGIVAPTGKPGTVILF---DCNLMHGSNGNITPFPRANAFLVYNAVS........................................................................................................................................................................................................................................................................................................................................................................................................... 269
34 -14.3005ybm_A mol:protein length:314 PrhA  ali model follow..  8  2.....GSSSSGLVPRGSHMPPRLQR-FPATASADEIFAAFQED-------GCVVIEGFISPEQVARFSQEVDPAMEKIPVEVT--RTKRFSKCVIASPTFRNEIIESDLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPAQRLHRDQELYPWWNSMGPAGPECVINFFCAVTP---TEENGATRLVPERDCPQFGKIETVPAIMQPGDCYLM---SGKVIHG-HNATTTDRRRALALAI............................................................................................................................................................................................................................................................................................................................................................................................................... 243
35 -14.2003nnf_A mol:protein length:344 CurA  ali model follow..  9  1.............MSSGVDLGTENLYFQSNAMNREQVEQLKQEYEEK---GYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGG-----IDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMH--NALFSVEPNHKGLPWHVGVFTKTEDFGASI-------WTKEHRGGMQYVSTKDYTIKDGYEEDEYNL--GDAFFF---NKYVLHQSVP-GLHKLRRAFVIRLVDYD........................................................................................................................................................................................................................................................................................................................................................................................................... 270
36 -14.2004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  18  1MSSGVDLGTENLYFQSMPERSDYEE---QQLQKEEEARKVK---------SGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFSAVINDYQPGGCIVSHVDPIHERPIVSVSFFSDSALCFGCK---------FQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEIHCIRPQDIKERRAVII.................................................................................................................................................................................................................................................................................................................................................................................................................. 233
37 -14.1005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  9  1MMTSKDHVKSQI----------------PRLSAINDLHKIWPTVEEH---GAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLSTTTRLVNVLAPISKAYREDV--LNSKVLHRICSDAFHVYGDYWVLMGAVMELAPSNPAQPLHRDM-PDAPATSINFLVALS-PFTAENGATHVIHKWQNLSNVSMDATVRALMNPGDALLI---TDSTIHC-AETTGTETRRLLTITM............................................................................................................................................................................................................................................................................................................................................................................................................... 231
38 -14.0005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  6  2...........................GRMQLTADQVEKYKSD-------GYVLLEGAFSPEEVHVMRQALKKDQEVQ---------GPHRILEEDGRTVRALYASHTRQSVFDQLSRSDRLLGPATQLLE-CDLYIHQFKINTKRAFGGDSWAWHQDF---PAPRAVNVGVFLSD--VTEFNGPVVFLSGSHQQMVEKHPMVSPKAASGSVMLF---HPEIIHGSAPNISPFARDLLIITYNDVA........................................................................................................................................................................................................................................................................................................................................................................................................... 235
39 -14.0004xbz_A mol:protein length:334 EvdO1  ali model follow..  8  10...PRGSHMMSSVGDLRVVNRIAECDIRRTGLLPEHVTAFRRQ-------GVLVVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGHPLLLRIMEQLVG-PNLIPTWDSMVFKTPAGAPRLAWHRDA---GAGRVIDAGIYLDP---APEDNCVWCIPESNYSEWDTTGAVPAVMQPGDLLLH---NILTLHG-APAVVGKQRRVIYFEYRPAE........................................................................................................................................................................................................................................................................................................................................................................................................... 259
40 -13.9005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  8  1MARSADQETEPGVPADLPAE-------SDPAALERLAARYRRD-------GYVHVPGVLDAGEVAEYLAEARRLLA---------HEESVRWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGLRLFKLEVLLKENKEKDASVPTAPHHDAF-STAGTALTAWVALVD---PVERGCMTFVPGSHLPGEIWMPRVTVPLRAGDCTFH---HARTVHSAGANSTDEPRLSTSAVYMDAT........................................................................................................................................................................................................................................................................................................................................................................................................... 240
41 -13.6002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  7  2.............................ACLSPSQLQKFQQD-------GFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSG-PVFKSITHSFKVQTLARSLGL-QMPVVVQSMYIFKQPHFGGEVSPHQDAS-EPLGRVLGVWIAVED--ATLENGCLWFIPGSHTSARDNSLFVPTPVQRGALVLI---HGEVVHKSKQNLSDRSRQAYTFHLMEAS........................................................................................................................................................................................................................................................................................................................................................................................................... 268
42 -13.6005epa_A mol:protein length:279 SnoK  ali model follow..  10  1MARSADPDPGGPTTAENLSKEAVRFYREQ---------------------GYVHIPRVLSETEVTAFRAACEEVLE---------EGREIWGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAG-APLRVYSSDILVKEPKRTLPTLVHDDET-NELSATLTAWIALTD--VPVERGCMSYVPGSHLPDYPWQPRVAVPVRAGDVVFH---HCRTVHMAEANTSDSVRMAHGVVYMDAD........................................................................................................................................................................................................................................................................................................................................................................................................... 237
43 -13.4004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  11  3....................................VRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSR------------------WSEASMAIMRRVQAAAFGPGQTLSVHVLDLEARGYIKPHVDSIKGATIAGLSL-------------LSPSVMRLVHTQEPGEWLELLLEP--GSLYILRGSARYDFHEILRRIPRGRRISVI.................................................................................................................................................................................................................................................................................................................................................................................................................. 186
44 -13.1002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  10  1...........................................MQEPLAAGAVILRRFAFNAAEQLIRDINDYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQR-----AATAAGYPDFQPDACLI--NRYAPGAKLSLHQDKDEPDLRAPIVSVSL----------GLPAIFQ---GGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGDCRYNLT--FRQAGKKEN....................................................................................................................................................................................................................................................................................................................................................................................................... 207
45 -13.0002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  8  1...................GSHMTNVTGDYTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMREGLV----ALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIGPNQDFRTF------W-TRESGGVALADGSHREVSEDEHLLHSPMEPGDILLF---HAHMCHKSIPNLSKDPRMSMDTRVQPAKSH......................................................................................................................................................................................................................................................................................................................................................................................................... 256
46 -13.0004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  10  44VANTTTLLDSGGGINKKSLLQNLLSKCKTTFQQSITLKDEKWLKNVRTAYFVCYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINSSRTINYLVSLNDSYYYPSTAFNSLKPSNDGHRIRKPHKD---NLDITPSSLFYFGNFQNT---EGYLEL--------TDKNCKVFVQP--GDVLFFK--GNEYKHVVANITSGW-RIGLVYFAHKG............................................................................................................................................................................................................................................................................................................................................................................................................ 299
47 -12.8003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  11  21..................................................GAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPINRYAPGAKLSLHQDKDEPDLRAPIVSVSL----------GLPAIFQ---GGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGDCRYNLT--FRQAGKKE........................................................................................................................................................................................................................................................................................................................................................................................................ 219
48 -12.6006EC3 Entity 1(prereleased)  ali follow..  9  248...............................RLGAQIRRFRED-------GFVNAGPVFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLFRPELAELAAAFVG-SPVVPTAFALVLKEPKRAAGVPWHRDRANVAPHTVCNLSICLDT--AGPENGCLEGVPIDVPEIRDGGPRVPVPSKVGDVIVH---DVRLVHGSGPNPSDQWRRTIVIEFANPA........................................................................................................................................................................................................................................................................................................................................................................................................... 457
49 -12.4004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  10  1............................................QEPLAAGAVILRRFAFNAAEQLIRDINDYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAM---------QSFHNLCQRAATAAGYPDFQPDACINRYAPGAKLCLHQDKIHPDLRAPIVSVSL----------GLPAIFQFGGLKRNDPLKRLLLEH--GDVVVWGGESRLFYHGIQPLKAGDCRYNLT.................................................................................................................................................................................................................................................................................................................................................................................................................. 197
50 -12.2004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  2................................ESEYEERRDAEARRVKS---IKQASIFTLEECARIEAKIDEVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVI--NDYQPGGCIVSHVDPIHERPIVSVSFFSDSALCFGCK---------FLFKPIRVSEPVLHLPVRRGSVTVLSGYAADDIHCIRPQDIKERRAVII.................................................................................................................................................................................................................................................................................................................................................................................................................. 212
51 -12.2004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  13  2.....................................QQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFSAVINDYQPGGCIVSHVDPIHERPIVSVSFFSDSALCFGCK---------FQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEIHCIRPQDIKERRAVII.................................................................................................................................................................................................................................................................................................................................................................................................................. 209
52 -11.9005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  12  12..................................................GMVLLKKFLKHDDQVDIIRRCQKLGIGSSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPVNFYTSSGKLGLHQDKDETKSLHKGLPVVSFS--------GDTAEF----GDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKPGRLNLT.................................................................................................................................................................................................................................................................................................................................................................................................................. 227
53 -10.7002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  9  38.....................................................LYPGFVDVKEADWILEQLCQDVPWKQRTGIRED--ITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTFNSLLC--NLYRNEDSVDWHSDDEPSLGRCPIIASLSF---------GATRTFPPEENGDYTYVERVKIPLDHGTLLIMEGATQADWHRVPK-HSREPRVNLT-W................................................................................................................................................................................................................................................................................................................................................................................................................ 232
54 -10.6002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  9  2.......................SHMSKKFALTAEQRASFEKN-------GFIGPFDAYSPEEMKETWKRTRLRLL------DRSAAAYQDLDAISGGTNIANYDRHLDDDFLASHICRPEICDRVESILGPNVLCWRTEFF--PKYPGDEGTDWHQADENEEFGGTITVWTAFTD--ANIANGCLQFIPGTQNSKPDEASAVPMQMKAGQFIIF---WSTLMHASYPGESQEMRMGFASRYVPSF........................................................................................................................................................................................................................................................................................................................................................................................................... 262
55 -10.6004mg2_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  15  14.....................................................SYTVLFGKAEADEIFQELEKEVEYFTGALARVQVADAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVL--------------INRYKDGDHICEHRDDERELAPGSPIASVSF---------GASRDFDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWHSLPV-KVLAPRVNLT.................................................................................................................................................................................................................................................................................................................................................................................................................. 198
56 -10.6003rzm_A mol:protein length:206 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  15  14.....................................................SYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVL--------------INRYKDGDHICEHRDDERELAPGSPIASVSF---------GASRDFDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWHSLPV-KVLAPRVNLT.................................................................................................................................................................................................................................................................................................................................................................................................................. 198
57 -10.5004mgt_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  16  14.....................................................SYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVL--------------INRYKDGDHICEHRD--DERELAPGSPIASVS--------GASRDFDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWHSLPV-KVLAPRVNLT.................................................................................................................................................................................................................................................................................................................................................................................................................. 198
58 -10.2003h8o_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  16  16.....................................................SYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVL--------------INRYKDGDHIGEHRD--DCRELAPGSPIASVS--------GASRDFDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWHSLPV-KVLAPRVNLT.................................................................................................................................................................................................................................................................................................................................................................................................................. 200
59 -10.1003rzg_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  15  16.....................................................SYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVL--------------INRYKDGDHICEHRDDERDLAPGSPIASVSF---------GASRDFDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWHSLPV-KVLAPRVNLT.................................................................................................................................................................................................................................................................................................................................................................................................................. 200
60 -9.9503thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  10  99.....................................VQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNS---QKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHIDTHSEDEIVSLSLGSEIVMDFKHPDGIAVPVM---------------LPR--RSLLVMTGESRYLWHGITCLSKRGLRTSFT.................................................................................................................................................................................................................................................................................................................................................................................................................. 308
61 -9.7803gja_A mol:protein length:319 CytC3  ali model follow..  9  4.......................VSEQANFTFSPEEVARFERD-------GYIGPVKIFEPEEMTRRWNIIRRQLL---------DRSLAIYPDSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEFF--PKYQGDEGTDWHQAA-RPAFIGTITVWTAFTH--STEQNGCLQLMPGTHTWKPDESQAYPMVLKPGEAVIF---WSNTMHASLPHTGSKTRMGFAARYVPTQ........................................................................................................................................................................................................................................................................................................................................................................................................... 264
62 -9.5906fxk_A mol:protein length:718 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3  ali model follow..  9  495....TSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVG----YEDQWLQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDESLRPHHD---SSTFTLNVALNHKGLDYE---GGGCRFLRYD---------CVISSPRKGWALLHP----THYHEGLPTTWGT-RYIMVSFVDPAA........................................................................................................................................................................................................................................................................................................................................................................................................... 717
63 -9.1003pl0_A mol:protein length:254 Uncharacterized protein  ali model follow..  9  2MHVDIELPLGRATALQRLRAQGFCVLTPAALMPLDAFDMMLPY------WEELAPDLHLKDGGHYRYRRHMQTLQPGQLETVQHRAHWQPTTYNALHGGMERWFEPLSN-----EMIHLPSWSALLVALIEAHPFRIDTEGGVGRPTPEG----AHRD---GVDFVAVVFIGRQG-------GGETRVFDAAGPQG----VRFTLEQPWTVLLL---DDQQVIHESTPLLPLDPRDTLVLTYRSGGFQAPA...................................................................................................................................................................................................................................................................................................................................................................................................... 254
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.