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Query: 4nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYELast
1 -154.0004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model  100  1MGSSSSGLVPRGSHMNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE 556
2 -106.0004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  19  2...........................SSGVDLGTENLYFQSMLEEDKIKGMFNPKIWDKTFQDLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSPNLFKLRQILYSKQYRDFFGYVTKAGKLSKTDMSINTYTKGCHLLTHDDVIGSRRILYLPDPDRKWKSHYGGGLRLFPSILPNPHSDPSAKLVPQFNQIAFFKVPGFSFHDVEEV-KVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNSEAEFTYLSQYISPEHLSSKGIEKLQKQFVENSSLQIESFLNDDKSELLKKVIKQKELEWKTAIPPHKARYLYIDGKEYRNFQTEADILEALNNNDLPNFQFTKDAIKIIS----------------------DASGNSRENNFDAELALIDLAVFHKSTIFKKYLALLTSLCPVSEQILIRRFRPGMDFTLATKCRFNEVLEGTLCLTPSAESGELGGYELYMMDSGDSVLINDPPAWNTFNLVLRDESVLEFVKYVSWSAKSS---------RWDVKMKWDV 629
3 -106.0003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  17  2...........KRKTAEVKGEKERNSKQISLEEDKIKGMFNPKIWDKTFQDGLKKEIEDS------------QPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSPNLFKLRQILYSKQYRDFFGYVTKAGKLSKTDMSINTYTKGCHLLTHDDVIGSRRILYLPDPDRKWKSHYGGGLRLFPSILPNPHSDPSAKLVPQFNQIAFFKVPGFSFHDVEEV-KVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNSEAEFTYLSQYISPEHLSSKGIEKLQKQFVENSSLQIESFLNDDKSELLKKVIKQKELPWKTAIPPHKARYLYIDGKEYRNFQTEADILEALNNNDLPNFQFTKDAIKII----------------------SDASGNSRENNFDAELALIDLAVFHKSTIFKKYLALLTSLCPVSEQILIRRFRPGMDFTLATKCRIDAVLEGTLCLTPSAESGELGGYELYMMDSGDSVLINDPPAWNTFNLVLRDESVLEFVKYVSWSAKSS---------RWDVKMKWDV 632
4 -104.0003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  18  3...............................EEDKIKGMFNPKIWDKTFQDGLKKEIEDS------------QPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWKLRQILYSKQYRDFFGYVTKAGKLSKTDMSINTYTKGCHLLTHDDVIGSRRILYLPDPDRKWKSHYGGGLRLFPSILPNPHSDPSAKLVPQFNQIAFFKVPGFSFHDVEEV-KVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNSEAEFTYLSQYISPEHLSSKGIEKLQKQFVENSSLQIESFLNDDKSELLKKVIKQKELEWKTAIPPHKARYLYIDGKEYRNFQTEADILEALNNNDLPNFQFTKDAIKIIS----------------------DASGNSRENNFDAELALIDLAVFHKSTIFKKYLALLTSLCPVSEQILIRRFRPGMDFTLATKCRFNEVLEGTLCLTPSAESGELGGYELYMMDSGDSVLINDPPAWNTFNLVLRDESVLEFVKYVSWSAKSS---------RWDVKMKWDV 613
5 -54.1002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  18  10..........................................................PALKLALEYIVPCMNKHGICVVDDFLGKE-TGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKPGCETIGLLMSSMDDLIRHCNGKLGSYKINRTKAMVACYPGNGTGYVRHVDNPNGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQ----FADIEPKFDRLLFFWSDRRNPH---EVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKP...................................................................................................................................................................................................................................................................................... 238
6 -53.0004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  18  9...........................................................ALKLALEYIVPCMNKHGICVVDDFLGKE-TGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKIRGDKITWIKEPGCETIGLLMSSMDDLIRHRTKAMVACYPGNGTGYVRHVDNPNGRCVTCIYYLNKDWDAKVSGGILRIFPEGK----AQFADIEPKFDRLLFFWSDRRNPH---EVQPAYATRYAITVWYFDADERARAKVKYLTGEKGLRVELNKP...................................................................................................................................................................................................................................................................................... 236
7 -52.5002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  17  6............................................................LKLALEYIVPCMNKHGICVVDDFLGKE-TGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKPGCETIGLLMSSMDDLIRHCNGKLGSYKINRTKAMVACYPGNGTGYVRHVDNPNGRCVTCIYYLNKDWDAKVSGGILRIFPEGK----AQFADIEPKFDRLLFFWSDRRNPH---EVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKP...................................................................................................................................................................................................................................................................................... 232
8 -51.6004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  17  1.......................................MGSSSSGLVPRGSHMASHISPEHPMLAAVVDDLATHGWSQQAHFLPAD-LVRALAAECRRRDAEGELNPVGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLLEDFECHFALYPPGAFYRRHLDRFDRRMVSAVLYLNEGWQPHDGGQLRMFLADGV------EHDVEPVAGCLVVFLSG-EVPH---EVLPAGRERLSLTGWFRRRGNDP.......................................................................................................................................................................................................................................................................................................... 222
9 -51.6005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  16  9.........................................................SAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGALMAHVDAVIRHCAGR--GRTKAMVACYPGNGLGYVRHVDN-DGRCITCIYYLNQNWDVKVHGGLLQIFPEGR----PVVANIEPLFDRLLIFWSDRRNPH---EVKPAYATRYAITVWYFDADERARAKDKYQLASGQKGVQVPVS...................................................................................................................................................................................................................................................................................... 238
10 -50.9005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  17  15..........................................................PALKLALEYIVPCMNKHGICVVDDFLGKE-TGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKPGCETIGLLMSSMDDLVLHCNGKLGSYKVNRTKAMVACYPGNGTGYVRHVDNPNGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQ----FADIEPKFDRLLFFWSDRRNPH---EVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKP...................................................................................................................................................................................................................................................................................... 243
11 -50.7006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  21  1MGSSSSGLVPRGSHMDERRPKIGCDKTGLALEKTWQLQK------NERLSNMVVNQL---------------NTNGFCIINNFLGSS-CSTEVLQQVLNLYQSGVRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYM-----RTKCMVACYPGSGLGYIRHIDNRDGRCVTVLYYLNPNWNSQDCGGQLWLYPNNENK----VVKIDPIFDRLLLFWSDRRNPH---EVKPAYAMRYAITLWYFDEKERALSSQNGT................................................................................................................................................................................................................................................................................................... 251
12 -50.6002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  18  15..........................................................PALKLALEYIVPCMNKHGICVVDDFLGKE-TGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKPGCETIGLLMSSMDDLIRHCNGKLGSYKIGRTKAMVACYPGNGTGYVRHVDNPDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQ----FADIEPKFDRLLFFWSDRRNPH---EVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKP...................................................................................................................................................................................................................................................................................... 243
13 -49.9005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  17  15..........................................................PALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIKEPGCETIGLLMSSMDDLICHRTKAMVACYPGNGTGYVRHVDNCNGRCVTCIYYLNKDWDAKVSGGILRIFPEGK----AQFADIEPKFDRLLFFWSDRRNPH---EVQPAYATRYAITVWYFDADERAAAKVKYLTGEKGVRVELNKP...................................................................................................................................................................................................................................................................................... 243
14 -25.3003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  16  16.............................................................................IEIPNVFSKQEVSHLREDARRWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRTDLSATLFLSEP-ENYQGGELVIQDTYGQ-------QSIKLSAGSLVLY--PSSSLHQVTPVLSG--ERTAAFMWLQSMVRDEGQR....................................................................................................................................................................................................................................................................................................... 197
15 -24.9005iqs_A mol:protein length:315 WelO5  ali model follow..  12  1MKSDYDIPTTENLYFQGSMSNNTVSTKPALHFLDINATEV------KKYPTAIQDIIINRS-------------FDGMIIRGVFPRDTMEQVARCQIYGHAIVGQSPDLKDYFASSAIFRQACRTMFQGSPDFEEQVESIFHSLSGLPVETYTPATIRLLLEGREIAVHVGNDFSDQLSYFIPLT---VPEAGGELVVYSLEWNPQEAS-SVAYAPGPGDMLLFN-GGRYYHRVSEV-IGNSPRRTIGGFLAFSKQRD.......................................................................................................................................................................................................................................................................................................... 302
16 -21.9002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  14  14................................................................GEVVHLSWSPR--FLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHQRVVTMLMYLT---TVEEGGETVLPNAEQKVTGDGWSEAVKPIKGDALMFSNDPASLHGSCPTLKGD--KWSATKWIHVAP............................................................................................................................................................................................................................................................................................................. 222
17 -21.2005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  11  21................................................................SDRPGVCDGKY-YEKIDGFLSDIELINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGEHEVIDKIQKKTREFLNIDKYNFEDVQVARYKPGQYYYHHYDGDDQRLATLMVYLKA---EEGGGGETDFP--------TLKTKIKPKKGTSIFFKLYKETLHAGLPVKSG--EKIIANQWIRAVK............................................................................................................................................................................................................................................................................................................. 222
18 -21.0003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  7  1............................................MQHTYPAQLMRFGTAARAEHMTIAAAIHADEADAIVMDIVPDGERDAWWDDQLQREQGDKLVSKAAEYFGIACRVNDGLRTTRFVRLFSDAAKPLTIGHDYEVEFLLATRRVYEPFEAPFNFAPHCDDVSPRQLGGFLTIQ---GADNDAGMVMWDNRPESRARAAKIMLKPQPGQLTLF--QSKNLH---AIERCTSTRRTMGLFL................................................................................................................................................................................................................................................................................................................. 262
19 -20.1006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  8  2...........GSSASGLVPRGSVPTEVTLYDLPTRKEEWEKKYLHPEFLSHLQNFKDFDY----------TEICNDVYSFPLFTPAFCKEVIEVSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDINAFVVKYDMESELAPHHDSSTYTLNIALNEYGKEYT---AGGCEFIRHKF--------IWQGQKVGYATIHAGKLLAYHRALPITSG--KRYILVSFVN................................................................................................................................................................................................................................................................................................................ 229
20 -19.8005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  15  31................................................................IQIISKFEEPL-IVVLGNVLSDEECDELIELSKSKLA----RSKVGSSRDVNDIRTSSGAFLD--DNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFANRISTLVMYLN---DVEEGGETFF---------PKLNLSVHPRKGMAVYFSLNELTLHGGAPVTKGE--KWIATQWVRRGT............................................................................................................................................................................................................................................................................................................. 215
21 -15.4003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  12  6..........................................................................FVTRLYHAPLSDAIDAEEMESSCYAIAEDDEAGQ-YTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGRALELEINILPEGGSHASH--IHPHSVISGTTYVS----PGGTSALKLEDPRTARDELRQFIYVTPAVGDVLLW--ESWLRHEV-PMNMSEDDRISVS.................................................................................................................................................................................................................................................................................................................... 198
22 -14.6002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  12  10..........................................................................FATRLYHAPLSEALDPAEFAASCYSIAEDDDAGQ-YTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEINILPEGGVHGSH--IHPHSVISGTTYVA----PEGTSALKLEDPRGAREELRTFRSVAPKVGDVLLW--ESWLRHEV-PMNMAEEDRISVS.................................................................................................................................................................................................................................................................................................................... 202
23 -12.8005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  8  1.........................GPTITETSKPTLRRIPRSAGDEAIFQVLQED-------------------GVVVIEGFMSADQFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMNDELHGLCKRLFGPESGDYWLTTSSVLPGYHGQELHREH----MLNFLTALT-DFTAENGGSHLWEDFSAPPPKADTAIPAVMNPGDAVLF--TGKTLHGAGKNNTTDFLRRGFPLIMQSCQFTPVEASVALPRELVETMTPLAQKMVGW................................................................................................................................................................................................................................................................................. 261
24 -12.3004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  12  2...................................................HMVPALTREQLYIFDTT-------GFLVIPGVFGSGEV-ESFRSELERLD--TVDPGFPRTRRYPDLPAASPVFARLALD---DRLLAPVRDVVNQPLR--LEGYGLRRTKDSVLYLHDGKLYCPYVKALVYLSDIQSPEDGS-FCYVQGSHKANGFPTLSDVFVRSGDVLLL--NEALMHG-TRRKLTEGDRLLTAFGYGPTFFTEWRELDAETADLRGAGYVDHDVEEDFV................................................................................................................................................................................................................................................................................ 260
25 -12.3004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  6  3........................................TATLDRAAAIERFRRD-------------------GFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLHREELAQLAAAFVDGPVV-AYALVLKEPYRAAEVPWHRDRVPRTVCNLSICLDD--AGPHNGCLEAVPGSAKVRATGPVVPVPVSQGDVVVH--DVRLVHG-SGPNANGSWRRTIVIEYADPA............................................................................................................................................................................................................................................................................................................. 218
26 -12.1005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  9  2...................GSSSSGLVPRGSHMPSRLQKFPATAPADEIYAAFKED-------------------GCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDRVKRFSKLVTTSPTFRHEI--LENDLMHELLQRVFSKPGEGNDTMVIEVQPGAPAQRLHRDQ--ECLVNFFCAVTP---TVENGATRLVPTDCPQYGKIDSVPAIMQPGDCYMM--SGKVIHGAGHNATLSDQRRALAFST................................................................................................................................................................................................................................................................................................................. 243
27 -11.9002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  8  10.............................................................................VILRRFAFNAA-EQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVS--------GLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPRYNLT.................................................................................................................................................................................................................................................................................................................... 198
28 -11.8004xbz_A mol:protein length:334 EvdO1  ali model follow..  14  1MGSSSSGLVPRGSHMMSSVGDLRVVNRIAE-------CDIRRTGLLPEHVTAFRRQ-------------------GVLVVRGLLTPQEL-ADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEYAGHPLLLRIMEQLVGPNLI-WDSMVFKTPAGAPRLAWHRDAGAGRVIDAGIYLDP---APEDNCVWCIPESNYWGDTTGAVPAVMQPGDLLLH--NILTLHGAPA--VVGKQRRVIYFEYRPAE............................................................................................................................................................................................................................................................................................................. 259
29 -11.8005ybm_A mol:protein length:314 PrhA  ali model follow..  16  1MGSSSSGLVPRGSHMPPRLQR------------------FPATASADEIFAAFQED-------------------GCVVIEGFISPEQFSQEVDPAMEKIPVEVTNNGNSNDRTKRFSKCVIASPTFRNEIIESDLMHELCDRVFSKPGEGNDNMVIEVQPGAPAQRLHRDQ--ECVINFFCAVTP---TEENGATRLVPRDCPQFGKIETVPAIMQPGDCYLM--SGKVIHGAGHNATTTDRRRALALAI................................................................................................................................................................................................................................................................................................................. 243
30 -11.8003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  11  100......................................................................................................................................HNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVS--------GLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPRYNLT.................................................................................................................................................................................................................................................................................................................... 211
31 -11.7004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  12  5...............................................................GSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYD----HWDAAIHGFRETEKSRWSEASMAIMRRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDSIK----ATIAGLS--------LSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFHEILRDEESRGRRISVI.................................................................................................................................................................................................................................................................................................................... 186
32 -11.7003nnf_A mol:protein length:344 CurA  ali model follow..  10  2...........................SSGVDLGTENLYFQSNAMNREQVEQLKQEYEEK---------------GYCQIKKIFDFSAI-KTIQKTLDQASKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNALFSVEPNHKGLPWHVGVGEDFGASIWIPLDK--TKEHRGGMQYVSTKIFIKDGYEEDEYNL--GDAFFF--NKYVLHSVPLKPGLHKLRRAFVIRLVDYD............................................................................................................................................................................................................................................................................................................. 270
33 -11.5004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  8  5.........................................................................AAGAVILRRFAFNAA-EQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDKIHPDLRAPIVSVS--------GLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPRYNLT.................................................................................................................................................................................................................................................................................................................... 197
34 -11.2005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  10  2.....................ARSADQETEPGVPADLPAESDPAALERLAARYRRD-------------------GYVHVPGVLDAGEYLAEARRLLAHEESVRWGSGAGTVMDYVADAQLGSDTMRRL--ATHPRIAALAEYLAGSPLRLFKLEVLLK-DASVPTAPHHDAFAGTALTAWVALVD---PVERGCMTFVPGSHLGEIWMPRVTVPLRAGDCTFH--HARTVHS-AGANSTDEPRLSTSAVYMDAT............................................................................................................................................................................................................................................................................................................. 240
35 -11.2002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  10  1......................SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEEN-------------------GFLVIKNLVPDADI-QRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVLPEILKYVECFTGPNIM-HTMLINKPPDSGKKTSRHPLHQSDLIVCAWTAMEH--ISRNNGCLVVLPGTHKGSENKARVHLVMEKGDTVFF--HPLLIHG-SGQNKTQGFRKAISCHFASAD............................................................................................................................................................................................................................................................................................................. 256
36 -11.1004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  8  9..................SRQRADAEMRPRLDPVVHSEWTNDAPISARQAAAFDRD-------------------GYIVLEDIFSADEV-AFLQKAAGNLLADPAALDADTIVTEPQSNEIRSIFEIHAQSAADARLADVARFLLGDEVY-QSRLNYKPGFKGREFYWHSDF-RMRALSMSVLLAE--NTPHNGPLMVIPGSHRTYHRHGIVAPTGKPGTVILF--DCNLMHG-SNGNITPFPRANAFLVYNAVS............................................................................................................................................................................................................................................................................................................. 269
37 -11.0005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  12  16...........................................................SAINDLHKIWPTVEEHGAAIIESFLSLDIV-RRLNEEVDPFVKIEPIPAAKTKDHPNHVLSTTTRLVNVLEDVLNSKVLHRICSDAF-DYWVLMGAVMELAPSNPAQPLHRDM----SINFLVALS-PFTAENGATHVIWQNLSNVSMDATVRALMNP-GDALLI--TDSTIHCGGAETTGTETRRLLTITMGISQLTPLESNLAVPRPVIESLTPLAQRLLGW................................................................................................................................................................................................................................................................................. 263
38 -10.9004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  7  4.GVDLGTENLYFQSMPERSDYEEQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEK---------------GLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHERPIVSVSFFSD--------ALCFFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEIHCIRP-QDIKERRAVII.................................................................................................................................................................................................................................................................................................................... 233
39 -10.8003emr_A mol:protein length:310 EctD  ali model follow..  10  7................SRQNNQPKILKRKDPVIYTDRSKDNQAPITKEQLDSYEKN-------------------GFLQIKNFFSEDEV-IDMQKAIFELQDSIKDVASDKVIREPESNDIRSIFHVHQDDANDKRILDIVRHLLGSDVY-QSRINYKPGFKGKEFDWHSDFERMRAISVSIALSD--NYSFNGPLMLIPGSHNTRIGGGISVPTGKAGSVTLF--ESNTMHG-STSNITPYPRNNLFMVYNSVK............................................................................................................................................................................................................................................................................................................. 270
40 -10.7005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  15  1MGSSSSGLVPRGSHMPP--------------------RRVNASQGSDAAYQILQED-------------------GCVIVEQVICPNII-AKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLLNLPFAHEVLEKVFKKDSGDNMGNILNMLPGAEAQRPHRDD----MINITFPLN-EFRHDNGGTLLLGPNADFYANAEDLPAAEMQVGDALIF--TGKCVHGGGA--RSDKPRIGLALAAQPGYLTPRESNVNVPRDIVETMTPLAQRMIGW................................................................................................................................................................................................................................................................................. 270
41 -10.6004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  10  1MTTFKQQTIKEKETKRKYCIKGTT-NRGEEVANTTTLLDSGGGINKKSLLQNLLSKCKTTFQQSFTNANITRTAYFVCYLPNVLPKE-LVEEFTEKFESIQTGRKKDTGYSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTC--STAFNSLKPSNDGHRIRKPHKDN-LDITPSSLFYFGNQNT---EGYLELTDKN-------CKVFVQP--GDVLFFKGNEYK-HVVANITSG--WRIGLVYFAHKG.............................................................................................................................................................................................................................................................................................................. 299
42 -10.6004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  8  1.........................GPEFTVDSKPQLQRLAADADVDRMCRLLEED-------------------GAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLHFKYVPNVATTCPTFRNTV--LINPVIHAICEAYFQGDYWLSAAFLREIESGMPAQPFHRDD----SLSVIFPLT-EFTEENGATEVIWTEVGTPERDQAVLATMDP-GDVLIV--RQRVVHA-GNRTTAGKPRRVVLAYFNSVQLTPFETYRTMPREMVESMTVLGQRMLGW................................................................................................................................................................................................................................................................................. 260
43 -10.4004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  9  2.....................RGSGSMTSQHQEHTGTKRFSIQSDPVEIHRAIVED-------------------GVAIIEGFLTPEQLNKDVDAPLKADREQLKFKADKKDDPHFWLADFIPDHVARVHNLVSHCFRHEILNHELLHKICRLYGAVIENGPGT----HRDQ----MLNFFTALT-DFDAETGKTQYIRVELGEPDADHPIEYVGLKPGDTTIV--SGKITHRGSD--RSDKMRRAMPIMIIPSILTPFDATCHLSRELVETMTPLAQKMICR................................................................................................................................................................................................................................................................................. 273
44 -10.3005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  13  14.............................................................................VLLKKFLKHDDQVDIIRRCQKLGDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKP-LPVVSFS--------GDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPRLNLT.................................................................................................................................................................................................................................................................................................................... 227
45 -10.0004xab_A mol:protein length:252 EvdO2  ali model follow..  10  1...................................MDAMEVVGTIDHRDREEFRSR-------------------GFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPHFARCRSIASAFLDMALEFYGHAILKPPRYGAPTPWHQDEARRRGLSIWTTLDE--ATVESGCLHYLPGGHRGPDPTSAVACPLAPGGAVVH--DFRTPHY-AGPNLTDQPRRAYVLVFMSAPAEVADPEPRP................................................................................................................................................................................................................................................................................................... 247
46 -10.0005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  8  2........................................GRMQLTADQVEKYKSD-------------------GYVLLEGAFSPEEVHVMRQALKKDQEVQGPHRILEEDGRTVRALYASHTRQSVFDQLSSDRLLGPATQLLECDLY-QFKINTKRAFGGDSWAWHQDFIAPRAVNVGVFLSD--VTEFNGPVVFLSGSHQRGEKHPMVSPKAASGSVMLF--HPEIIHG-SAPNISPFARDLLIITYNDVA............................................................................................................................................................................................................................................................................................................. 235
47 -9.6602iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  8  2...GSSSSGLVPRGSHMRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHP----------------------------VLRTLKNRIEENTGHTFN---SLLCNLYRNEDSVDWHSDDEPS---PIIASLS--------GATRTFPEENGDYTYVERVKIPLDHGTLLIMATQADWQHRVPKEYHSREPRVNLT-W.................................................................................................................................................................................................................................................................................................................. 232
48 -9.5802fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  5  2....................................SHMSKKFALTAEQRASFEKN-------------------GFIGPFDAYSPEEM-KETWKRTRLRLLDRSAAAYQDLDAISGGTNIANYDRHLDDDFLRPEICDRVESILGPNVLCWRTEFFPKYPGDEGTDWHQADTFGGTITVWTAFTD--ANIANGCLQFIPGTQNSMDEASAVPMQMKAGQFIIF--WSTLMHSYPHSGESQEMRMGFASRYVPSF............................................................................................................................................................................................................................................................................................................. 262
49 -9.3404npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  20.............................................................................IKQASIFTLEE-CARIEAKIDEVVAKADKGLYREHRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVDPIHERPIVSVSFFSD--------ALCF-LFKPIRVSEPVLHLPVRRGSVTVLSGYAADDIHCIRPQDIKER-RAVII.................................................................................................................................................................................................................................................................................................................... 212
50 -9.3202rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  8  1.............................GSHMTNVTGDYTDCTPLLGDRAALDSFYEEH---------------GYLFLRNVLDRDLV-KTVAEQMREGLVALGAADPHATLEELTIDSFESVDEVAMHDWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSHYLTPFHQDGPNQDFRTFWIPLIR---TRESGGVALADGSHREDEHLLHSPMEP--GDILLF--HAHMCHKSIPNLSKDLMRMSMDTRVQPAKSHRGFNAMTP................................................................................................................................................................................................................................................................................................... 264
51 -9.2604o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  6  1......................GQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEK---------------GLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHERPIVSVSFFSD--------ALCF-QFKPIRVSEPVLSLPVRRGSVTVLSGYAADEIHCIRP--DIKERRAVII.................................................................................................................................................................................................................................................................................................................... 209
52 -9.2305epa_A mol:protein length:279 SnoK  ali model follow..  10  1...........................MARSADPDPGGPTTAENLSKEAVRFYREQ-------------------GYVHIPRVLSETEVTAFRAEEVLEKEGREIWGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAGAPLR-SSDILVKEPKRTLPTLVHDDETLSATLTAWIALTD---PVERGCMSYVPGSHLDYPWQPRVAVPVRAGDVVFH--HCRTVHM-AEANTSDSVRMAHGVVYMDAD............................................................................................................................................................................................................................................................................................................. 237
53 -9.1603gja_A mol:protein length:319 CytC3  ali model follow..  8  1....................................................MTTVSEQANFTFSPEEVARFERDGYIGPVKIFEPEEMWNIIRRQLLDRSLAIYPDSNGKANISNYDRHLDIDLLAEH--IMRPEIVDRVGSLIGRNLLCWRSEFFPKYQGDEGTDWHQAATFIGTITVWTAFTH--STEQNGCLQLMPGTHTSMDESQAYPMVLKPGEAVIF--WSNTMHA-PHTGSKTDYRMGFAARYVPTQ............................................................................................................................................................................................................................................................................................................. 264
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.