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Query: 4nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDKIHPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKELast
1 -97.7004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model  100  1QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDKIHPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE 205
2 -96.2002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  98  2QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE 206
3 -91.9003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  98  15QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE 219
4 -69.8005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  31  6LQYLRPGMVLLKKFLKHDDQVDIIRRCQGIGSGGFYTPGYRDGGKLSLQMMCLG---KNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPNLRPGRLNLTFRQ..... 230
5 -55.5004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  18  35..RKVKSGIRQMRLFSQDECAKIEARIDEVVSRA------EKGLYNEHTVDRAPLRNKYFFGEGYTYGAQRLYPPGDVDEIPEWVHQLVIQKLVEHRIPEGFVNSAVINDYQPGGCIVSHVD-PIHIFERPIVSVSFFSDSALCFGCKRVSEPVLSLPVRRGSVTVLSGYAADITHCIRPQD------IKERRAVIILRKTRLDA 241
6 -55.2004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  18  15..RVKSGIKQ-ASIFTLEECARIEAKIDEVVAKA------DKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKSKGEVDDIPDWVHEVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHV-DPIHIFERPIVSVSFFSDSALCFGCKRVSEPVLHLPVRRGSVTVLSGYAADITHCIRPQD------IKERRAVIILRKTRADA 220
7 -53.5003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  20  107.QALPPGLMVVEEIISSEEEKMLLESVDWTED-----------TDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGLPDICESFLEKWLR-KGYIKHKPDQMTINQYEPGQGIPAHID-THSAFEDEIVSLSLGSEIVMDFKH--PDGIAVPVMLPRRSLLVMTGESRYWTHGITCRKFDTVQSKRGLRTSFTFRKVRQTP 316
8 -52.6004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  18  11.RKVKSGIRQ-MRLFSQDECAKIEARIDEVVSRA------EKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLLYPPGDVDEIPEWVHQLVIQKLVEHRIPEGFVNSAVINDYQPGGCIVSHV-DPIHIFERPIVSVSFFSDSALCFGCKRVSEPVLSLPVRRGSVTVLSGYAADITHCIRPQD------IKERRAVIILRKTRLDA 217
9 -50.3004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  17  12.SRLQDAAVVRPGFLSTAEEETLSRELE-------------------------PELRRRRYEYDHWDAAIHGFRETEKSRWSEASMAIMRRVQAAAFGPQTLLSSVHVLDLEARGYIKPHVD-SIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYFSHEILRDEESFRRIPRGRRISVICRSLPEGM 194
10 -47.5003h8o_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  21  6RHIRAEGDSSYTVLFGKAEADEIFQELEVEYFTGALARVQVFGKWHSVPRKQATYGD---AGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHIGEHRDDCRELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKILLTK 208
11 -47.4003rzg_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  21  6RHIRAEGDSSYTVLFGKAEADEIFQELEVEYFTGALARVQVFGKWHSVPRKQATYGD---AGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERDLASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKILLTK 208
12 -47.3003rzm_A mol:protein length:206 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  21  4RHIRAEGDSSYTVLFGKAEADEIFQELEVEYFTGALARVQVFGKWHSVPRKQATYGD---AGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKILLT. 205
13 -47.2004mgt_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  21  4RHIRAEGDSSYTVLFGKAEADEIFQELEVEYFTGALARVQVFGKWHSVPAKQATYGD---AGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKILLG. 205
14 -46.8002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  17  36.......VCLYPGFVDVKEADWILE--QLCQDVPWKQRTGIEDITYQQPRLTAWYGE------PYTYSRITMEPNPHWHPV------LRTLKNRIEENTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGPIIASLSFGATRTFEMRKKPPPEERVKIPLDHGTLLIMEGATQDWQHRVPKEYH-----SREPRVNLTFRTVYPDP 227
15 -46.0004mg2_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  21  4RHIRAEGDSSYTVLFGKAEADEIFQELEVEYFTGALARVQVAGKWHSVPRKQATYGD---AGLTYTFSGLTLSPKPWIPV-------LERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNHWYHSLPVRKK-----VLAPRVNLTFRKIL... 203
16 -26.8003lfm_A mol:protein length:495 Protein fto  ali model follow..  12  168.......................................................................................SYNGQDEVDIKSRAAYNVTLLNFFGMGKMAVSWHHDENLVDRSAVYSYSCEGPEEESEDDSHLEGRGLAIPLHQGDCYFMLDDLNTHQHCVLA---------SQPRFSSTHRVAECST 312
17 -16.3005iqs_A mol:protein length:315 WelO5  ali model follow..  9  57......DGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIYGHAIVGQSPDLKDYFASSAIFRQACRTMFQGSPDFEEQVESIFH-EGQTYTPATIRLLLEGREIAVHVGNDFLLMPSDQLSYFIGELVVYSLEWNPQEAQSVAYAPGPGDMLLFNG--GRYYHRVSEVIGN------SPRRTIG........ 292
18 -16.0003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  13  11...FQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQLD------------------KDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDPDGMIRTDLSATLFLGGELVI-----QDTYGQQSIKLSAGSLVLYPSSS---LHQV-------TPVLSGERTAAF........ 184
19 -13.9004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  15  31DDLATHGWSQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATQEVRETIRG------------DQIQWIDPGQAEACDQYLAAMLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRFRDDDRRMVSAVLYGQLRMF-----LADGVEHDVEPVAGCLVVF--LSGEVPHEVLPAGRE--------RLSLT........ 212
20 -13.5002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  12  26PCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI---------GDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 213
21 -13.4002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  9  30....EHGYLFLRNVLDRDLVKTVAEMREGLVALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFWNN--------PSTIKVFEQVFPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIGPNQDFRTFWIGGVALADGSHRSEDEHLLHSPMEPGDILLFHAHM---CHK---SIPNLSKDPRLMRMSMDTRVQPAKS 255
22 -13.2003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  10  48EDSQPYNWGTIHELVNDDLLRAVRKEIE---------------TEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKFGYVTKAGKLSGSKTDMNTYTKGCHLLTHDDVIGSRRISFILYLPDGGLRLFP-PNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVD------KHRLSIQYHIPQVGE 252
23 -13.1004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  12  19PCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI---------GDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 206
24 -13.0006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  11  58........VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYV----------VFNYVAPFVRHLYNNYKTKDINLAFVVKYDMERQSELAPHHDSSTYTLNIALNEYG-AGGCEF------IRHKFIWQGQKVGYATIHAGKLLA-YHRA-------LPITSGKRYILV........ 225
25 -12.8002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  12  21PCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI---------GDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 208
26 -12.6003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  9  29EDSQPYNWGTIHELVNDDLLRAVRKEIE---------------TEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKFGYVTKAGKLSGSKTDMNTYTKGCHLLTHDDVIGSRRISFILYLPDGGLRLFPSILPNVPHSDPSAKLVPNQIAFFKVLPGFSFHDVEEVKVD------KHRLSIQ........ 223
27 -12.6005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  12  26PAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI--------RGDKITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRAMVACYPGNGTGYVRHVDNCNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 213
28 -12.6002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  12  15PCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI--------RGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 202
29 -12.4003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  10  37........AIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATSVTLGQLQREQGDKLVSKFGIACRVNDGLRTTRFVRLFSDALDAKPLTIGHDYEVEFLLATRRVYEPFEAFAPHCDDVSYGRDTVQLGGFLAGMVMWDNRPESRAAAKIMLKPQPGQLTLFQSKN---LHAIERC--------TSTRRTMGL....... 260
30 -12.4004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  10  45EDSQPYNWGTIHELVNDDLLRAVRKEIE---------------TEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNL-KQYRDFFGYVTKAGKLSGSKTDMS-INTYTKGCHLLTHDDVIGSRRISFILYLPDGGLRLFPSILPNVPHSDPSAKLVPNQIAFFKVLPGFSFHDVEEVKVD------KHRLSIQ........ 239
31 -12.3005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  12  26PCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDI---------GDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDGGILRIFPEGKAQFADIEPKFDRLLFFW-SDRRNPHEVQPAYAT--------RYAIT........ 213
32 -11.9002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  10  7.KSLFATRLYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREG------YPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPLRTFRSVAPKVGDVLLWES---WLRHEVPMNMAE------EDRISVSFNYAWGEG 210
33 -11.5006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  12  49NQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIR----------GDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGMITGRTKCMVACYPGSGLGYIRHIDNPNRDGRCVTVLYYLNPNGGQLWLYPNNENKVVKIDPIFDRLLLFWSDRRN-PHEVKPAYAM--------RYAIT........ 234
34 -11.5004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  8  74....PFLHCVIPNFIQSQDLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF---------------------EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLV-GTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKS-----RLSIS........ 248
35 -11.4005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  11  21PCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSI---------GDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRN-PHEVKPAYAT--------RYAIT........ 208
36 -11.4003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  12  76................................................................................LDAHVAAFAEDLEFDLDGRALELEDLWINILPEGGSHASHIHPHSVISGTTYVSMPGGTSALKRKTARDELRQFIYVTPAVGDVLLWES---WLRHEVPMNMSE------DDRISVSFNYRWAEG 206
37 -11.3002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  13  23.....PRAFLLKNFLSDEECDYIVEKAR--------------------PKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGLTTVEEGGETVLPNAEQKVTGDGWSECAKRGAVKPIKGDALMFYS--PASLHGSCPTLKGDKWSAT........ 215
38 -11.3005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  6  30.....KYYEKIDGFLSDIECDVLINAAI------------------KGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGEHEVIDKIQKKTREFLNIDKYNFEDVQVARYKPGQYYYHHYDDDACPKDQRLATLMVGGETDF-------PTLKTKIKPKKGTSIFFWVADPVTRKLYKETLHAGLPVKSGEKIIANIRA..... 220
39 -11.0004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  11  35....EDGVAIIEGFLTPEQVQKLNKDVD-----APLKADREQLKFKADKKDDPHFWLADFIPDHVARVHNLVDFSHCFRHEHELLHKICRLTFEES--GDYWLGYGAVIENGPGTTQKWHRDQTDFDAETGKTQYILGSNKRVELGEPDADHPIEYVGLKPGDTTIVSGKI---THRGSDNRSD------KMRRAMPI....... 239
40 -11.0004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  12  109.......LAYLPNVLPKELVEEFTEKFESIQTGR-KKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAGHRIRKPHKDNLDITPS---SLFYFGN--QNTEGYLELTDKNCKVFVQPGDVLFFKG--NEYKHVVANITS-------GWRIGLVY....... 294
41 -10.9005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  12  40.....PLIVVLGNVLSDEECDELIELSK--------------------SKLARSKVGSSRDVNDIRTSSGAFLDDN------ELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDHSRSAANNRISTLVMGGETFF-------PKLNLSVHPRKGMAVYFQSLNELTLHG-------GAPVTKGEKWIAT........ 208
42 -10.6004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  9  30....EDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADKYPPHFKYVPNV----ATTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAQPFHRDDATHPLMHYQPLEAPPVSLFTEENGATEVILGSHRPERDQAVLATMDPGDVLIVRQRV---VHAGGGNRTTAGKPRRVVLAYFNSVQLTPFE 237
43 -10.5002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  11  33....ENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMH------TMLINKPPDSGKKTSRHPLHQDLHYSDLIVCAWTGCLVVLGIQDYEENKARVHLVMEKGDTVFFHPLL---IHGSGQNKTQ------GFRKAISCHFASAD. 256
44 -10.5004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  10  17....RDGFANAGPVLAPDAIARLKAGAERLITRF-TDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLHREELAQLAAAFVDGPVVPTA------YALVLKEPYRAAEVPWHRD-DDAGPHNGCLEAVPGSHLLPDDAEVAATGPVVPVPVSQGDVVVHDVRL---VHGSGPNANG------SWRRTIVIEYADPA. 218
45 -10.3005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  14  37....EDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKRF-------------SKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGMGYHFNDTMVIEVQPGAPQRLHRDQEGPDAPECLVNFFCGATRLVPGSNRYGKIDSVPAIMQPGDCYMMSGKV---IHGAGHNATLSDQ-----RRALAF....... 241
46 -10.2004xab_A mol:protein length:252 EvdO2  ali model follow..  11  20....SRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPL------LPQIIKPEKYVPELLDSPHFARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHQDEDEATVESGCLHYLPGGHRGPVLPHHHDPTSAVACPLAPGGAVVHDFRT---PHYAGPNLTD------QPRRAYVLVFMSAP. 237
47 -9.9205ybm_A mol:protein length:314 PrhA  ali model follow..  13  37....EDGCVVIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKRFS------------VIASPTFRNEIIESDLMHELCDRVFSKPGEGMGY--HFNDNMVIEVQPGAPAQRLHRDQEGPAGPECVINFFCGATRLVPGSHLFGKIETVPAIMQPGDCYLMSGKV---IHGAGHNATTTDR-----RRALALAIIRR.. 246
48 -9.9201vrb_A mol:protein length:342 Putative asparaginyl hydroxylase  ali model follow..  10  114..................................................................................PQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYT------NLIFQIQGEKTWKLAKNENVSNPMQVNLTPGTMLYL---PRGLWHSTKSDQATLA-------LNITFGQPAWLD 252
49 -9.8903nnf_A mol:protein length:344 CurA  ali model follow..  12  33....EKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQ---------------EKLALLNYITGKNLMIMHNALFSVEPNHKGLPWHVGVGSFSFTKPLDKITKEHRGGMQY-DYTIKDGYEEDEYNLGDAFFFNK---YVLHQSVPLKPGLH----KLRRAFVIRLVDYD. 270
50 -9.8605zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  10  36....EDGCVIVEQVICPNIIAKISDDVNVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNL----------PFAHEVLEKVFKKDSGDYWLNMGNILNMLPGAEAQRPHRDDHMDPATSPDLMINIGGTLLLNADFYANAEDLPAAEMQVGDALIFTGKC---VHGGGANRSD------KPRIGLAL....... 236
51 -9.8005epa_A mol:protein length:279 SnoK  ali model follow..  10  28....EQGYVHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQAWQK-----------HPELRSLVLHPEISGIALRLAGAPLRVYS------SDILVKEPKRTLPTLVHDDETDVPVERGCMSYVPGSHLRAREDRQEPWQPRVAVPVRAGDVVFHHCRT---VHMAEANTSD------SVRMAHGVVYMDAD. 237
52 -9.7504xbz_A mol:protein length:334 EvdO1  ali model follow..  7  48....RQGVLVVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGH---PLLLRIMEQLVGPNLIPTW------DSMVFKTPAGAPRLAWHRDAVGVTGAGRVIDAGINCVWCIPESNYWDTTGAVPAVMQPGDLLLHNILT---LHG-------APAVVGKQRRVIYFE...... 254
53 -9.7005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  11  26QVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMND-------------ELLHGLCKRLFGPESGDYWLTTSSVLETEPGYHGQELHREHDTLGRQSPESMLNFGATRVLPGSHLPKADTAIPAVMNPGDAVLFTGKT---LHGAGKNNTTDFL-----RRGFPL....... 227
54 -9.5305ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  8  35....RDGYVHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENKEKDASVPTADAFAFPFSTAGTALTAWVALVDVPVERGCMTFVPGSHLL-FTRPGEIWMPRVTVPLRAGDCTFHHART---VHSAGANSTD------EPRLSTSAVYMDAT. 240
55 -9.3005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  17  30....EHGAAIIESFLSLDIVRRLNEEVDFVKIEPIPAAKTKDHPNHVLSTTTRLVNVLAPISKAYR---------------SKVLHRICSDAFHVYG--DYWVLMGAVMELAPSNPQPLHRDMRYLKPDAPATSINFGATHVILGSHKVSMDATVRALMNPGDALLITDST---IHCGGAETTGTET-----RRLLTI....... 229
56 -9.1806EC3 Entity 1(prereleased)  ali follow..  10  258....EDGFVNAGPVFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLFR---PELAELAAAFVGSPVVPTA------FALVLKEPKRAAGVPWHRDRDTAGPENGCLEGVPGSPDDIDVPEIRDGGPRVPVPSKVGDVIVHDV---RLVHGSGPNPSD------QWRRTIVIEFANPA. 457
57 -9.0902xdv_A mol:protein length:442 MYC-INDUCED NUCLEAR ANTIGEN  ali model follow..  10  44QRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKL-------ECYFGSLVGSNVYITPAGSQGLPPHYDDVE------VFILQLEGEKHWRLYHPTVPRPVHEFMLKPGDLLYF---PRGTIHQADTPAGLAHS------THVTIS...... 234
58 -9.0604y4r_A mol:protein length:454 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66  ali model follow..  13  123.............................................................................LLCPQAFSTTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIE------AFVLQLEGRKLWRVYRPRVPEPVLQTVLEPGDLLYF---PRGFIHQAECQDGVHS-------LHLTLS...... 246
59 -9.0004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  11  24..................DQRRLTDDLAVLAKSNFSSEYSDFAC--RWEFCMLRNQSGKQEEQRVVVHETPALATPLGQSLP-YLNELLDNHFDRDSI-----RYARIIRISENACIIPHRDYLELEGKFIRVHLVLNEKCSNTEENNI-------FHMGRGEIWFLDASLP---HSAGCFSP-------TPRLHLVV....... 181
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.