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Query: 4npl_A mol:protein length:250 RNA demethylase ALKBH5, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst DESEYEERRDAEARRVKSGIKQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAADDITHCIRPQDIKERRAVIILRKTRADAPRLDSNSLSPSIVSPKRRHILKAKRSHRKALast
1 -112.0004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model  100  1DESEYEERRDAEARRVKSGIKQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAADDITHCIRPQDIKERRAVIILRKTRADAPRLDSNSLSPSIVSPKRRHILKAKRSHRKA 250
2 -95.6004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  82  2....QQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLET......................... 222
3 -94.4004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  79  21SDYEEQQLQKEEEARKVKSGRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL........................... 244
4 -67.0003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  16  100......QWKELRPQALPPGLMVEEIISSEEEKMLLESVDWTEDTDNQ-----NSQKSLKHRRVKHFGYEFHYENNNVDKDKPLS--------GGLPDICESFLEKWLRK---YIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHP--------DGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKENLYFQGLE....... 339
5 -63.3004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  16  8.........PSVLSRLQDAAVVPGFLSTAEEETLSRELEP-----------------ELRRRRYEYDHWDAAIHG-----------FRETEKSRWSEASMAIMRRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDSIKFCGATIAGLSLLSPSVMRLVHT------QEPGEWLELLLEPGSLYILRGSARYDFSHEILRDEERGRRISVICRSLPEGMGPGES......................... 199
6 -55.2004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  18  3..............PLAAGAVIRRFAFNAAEQLIRDINDVASQSPPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQ---------TNKPWPAMPQSFHN-LCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQKIHPDLRAPIVSVSLGLPAIFQFGGL------KRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKTIDCRYNLTFRQAGKKE.............................. 205
7 -54.6002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  18  4..............PLAAGAVIRRFAFNAAEQLIRDINDVASQSPFRGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQ---------TNKPWPAMPQSFHN-LCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDDEPDLRAPIVSVSLGLPAIFQFGGL------KRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKTIDCRYNLTFRQAGKKE.............................. 206
8 -53.9003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  18  9......ADAEPWQEPLAAGAVIRRFAFNAAEQLIRDINDVASQSPPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQ---------TNKPWPAMPQSFHN-LCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDDEPDLRAPIVSVSLGLPAIFQFGGL------KRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKTIDCRYNLTFRQAGKKE.............................. 219
9 -49.6004mgt_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  18  13...................SSYTVLFGKAEADEIFQELEKEFTGALARVQVFGKWHSVPAKQATYGDAGLTYT-------------FSGLTLSPKP--WIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKVLAPRVNLTFRKILLG............................... 205
10 -49.5003rzm_A mol:protein length:206 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  18  13...................SSYTVLFGKAEADEIFQELEK-----------EVEYFTGALARVQVFGKWHSVPRKQA-GDAGLTYTFSGLTLSPKP--WIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHICEHRDDERELAPPIASVSFGASRDFVFRHKDSRGSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKVLAPRVNLTFRKILLTA.............................. 206
11 -49.3002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  16  37...................CLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPH----------------WHPVLRTLKNRIEENTGHTFNSLLCNLYRNEDSVDWHSDDEPSLGRIIASLSFGATRTFEMRKKPPPEENGDYVERVKIPLDHGTLLIMEGATQADWQHRVPKEHSREPRVNLTFRTVYPD............................... 226
12 -49.2005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  10  3.........AAPLQYLRPGMVLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKGLPVVSFSLGDTAEFLYGDV------NDVDKASKVDLESGDVLIFGGKSRLIF-HGVSRAKLRPGRLNLTFRQ................................... 230
13 -49.1004mg2_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  18  13...................SSYTVLFGKAEADEIFQELEKEFTGALARVQVAGKWHSVPRKQATYGDAGLTYT-------------FSGLTLSPKP--WIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHICEHRDDERELAPPIASVSFGASRDFVFRHKDSRGSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKVLAPRVNLTFRKI.................................. 202
14 -48.7003h8o_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  18  15...................SSYTVLFGKAEADEIFQELEK-----------EVEYFTGALARVQVFGKWHSVPRKQA-GDAGLTYTFSGLTLSPKP--WIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHIGEHRDDCRELAPPIASVSFGASRDFVFRHKDSRGSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKVLAPRVNLTFRKILLTK.............................. 208
15 -48.7003rzg_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  17  15...................SSYTVLFGKAEADEIFQELEKE------------EYFTGALARVQVFGKWHSVPRKQA-GDAGLTYTFSGLTLSPKP--WIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHICEHRDDERDLAPPIASVSFGASRDFVFRHKDSRGSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKVLAPRVNLTFRKILLTK.............................. 208
16 -28.6003lfm_A mol:protein length:495 Protein fto  ali model follow..  12  18KDDEFYQQWQLKYPKLIEASSVSEELHKEVQEAFLTLHKHGCLFRDLVRIQGKDLLTPVSRILI--GCTYKYLNTRLFTVPANEDAVPLCMSADFPRVGMGSSYNGQDEVDIKSRAAYNVTLLNFFGMGMAVSWHHDENLVDRSAVYSYSCEGPEEESEDDSHLEGRDPDETPGLAIPLHQGDCYFMLDDLNATHQHCVLAGS--QPRFSSTHRVAECSTGTLDYILQRCQLALQNVCDDVDNDDVSLKS 342
17 -20.6005iqs_A mol:protein length:315 WelO5  ali model follow..  10  36.NATEVKKYPTAIQDIIDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIY---KDYFASSAIFRQACRTMFQGSPDFEEQVESIFHSLSGLPVEIPTGPEGQTYTPATIRLLLEGREIAVHVGNDFTLLDLSDQLSYGGELVVEYMDDVEFKIKSNQSQSVAYAPGPGDMLLFNGG---RYYHRVSEVIGNSPRRTIG...................................... 292
18 -19.0003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  13  16...................IEIPNVFSKQEVSHLREQLDARRWIDGN----------------------QTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDDGMIRTDLSATLFLSEPENYQGGELV-----QDTYGQQSIKLSAGSLVLYPSSS----LHQVTP--LSGERTAAF...................................... 184
19 -15.5004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  14  18.................DGANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLHREELAQLAAAFVDGPVV--------------YALVLKEPYRAAEVPWHRDRVNVGPRTVCNLSICLDDA-LLPDDAEVAKVRATGPVVPVPVSQGDVVVHDVRL-----HGSGPNANGSWRRTIVIEYADPAA.............................. 219
20 -15.4002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  10  1.......MSLAQIKSLFATRLYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYASLT------------DLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGRLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRRKGAREELRTFRSVAPKVGDVLLWES----WLRHEVPMNMAEEDRISVSFNYAWGEG.............................. 210
21 -15.2003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  11  19.EHMTIAAAIHALDADEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATSVTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRTTRFVRLFSDALDAKPLTIGHDYEVEFLLATRRVYEPFEAFAPHCDLKRSFPRQLGGFLTIQG-GMVMWDNRPESRAAERAAKIMLKPQPGQLTLFQSKN----LHAIER--CTSTRRTMGL..................................... 260
22 -15.1003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  9  2............SLSLFVTRLYHAPLSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYT------------SYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGELEDLWINILPEGGSHASHIHPHSVISGTTYVSMPGGTSALKLEDPRRKTARDELRQFIYVTPAVGDVLLWES----WLRHEVPMNMSEDDRISVSFN.................................... 200
23 -15.0004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  10  93NVRTAYFVCDHDGSVEL--AYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFNSNDGHRIRKPHKDNLDITPSSLFYFG--TEGYLELTD------------NCKVFVQPGDVLFFKGNE---YKHVVAN--TSGWRIGLVY..................................... 294
24 -14.8002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  8  15......PALKLALEYIVPCMVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTK----------AMVACYPGNGTGYVRHVDNPNGDGRCVTCI-LNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKD. 250
25 -14.6004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  8  2SQTKPLPALKLALEYIVPCMVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTK----------AMVACYPGNGTGYVRHVDNPNGDGRCVTCI-LNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAY--ATRYAITVWYFDADERARAKVKYLTGEKGLRVELNKPSD...... 238
26 -14.5006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  11  44.....QNFKDFDYTEICNDVYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDP---------------------RIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFNNYKTKDINLAFVVKYDMERQLAPHHDS-STYTLNIALNEYGKE-GCEFIRH----------KFIWQGQKVGYATIHAGKLLA--YHRALP--TSGKRYILV...................................... 225
27 -14.4002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  8  5.QTKPLPALKLALEYIVPCMVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTK----------AMVACYPGNGTGYVRHVDNPNGDGRCVTCI-LNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAY--ATRYAITV--YFDADERARAKVKYLTGEKGVRVELNKP....... 238
28 -14.4002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  10  3.....LPALKLALEYIVPCMVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIR--GDKITWIEGKEPGCETIGLLMS--SMDDLIRHCNGKLGSYKINGRTK------AMVACYPGNGTGYVRHVDNPNGDGRCVTCI-LNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKD. 239
29 -14.0005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  8  15......PALKLALEYIVPAMVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIR--------GDKITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTK--AMVACYPGNGTGYVRHVDNCNGDGRCVTCI-LNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQP--AYATRYAITVWYFDADERAAAKVKYLTGEKGVRVELNKPSDSVGK.. 249
30 -14.0005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  8  15......PALKLALEYIVPCMVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRTK----------AMVACYPGNGTGYVRHVDNPNGDGRCVTCI-LNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAY--ATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKD. 250
31 -13.8004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  11  39...................SQQAHFLPADLVRALAAECRRRDAEGE-----------------------LNPAGVGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQECHFALYPPGAFYRRHLDRFRDDDRRMVSAVLYLNEGWQPHDGGQLRMFLADGVEHDVEPVAGCLVVFLSGEVP---HEVLP--AGRERLSLTFRRRGNDP.............................. 222
32 -13.2005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  11  4EEALPSAPERLALDYIVPCMVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTK----------AMVACYPGNGLGYVRHVDNPHGDGRCITCI-LNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRN---HEVKP--AYATRYAITWYFDADERARAKDKYQLASGQKGVQVPVSQP....... 240
33 -13.2004xab_A mol:protein length:252 EvdO2  ali model follow..  12  2DAMEVVGTIDHRDRE--RGAILPQVASESEVAWLRQAYDRL--FVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKYVPELLDSPHFARCRSIASAFLDMAEEELE----------GHAILKPPRYGAPTPWHQDDEATVESGCLHYLPGGHRGPVLPHHHIDNDDRDPTSAVACPLAPGGAVVHDFRT-----HYAGPNLTDQPRRAYVLVFMSAPA.............................. 238
34 -13.1002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  11  15.................DGLVLEGFLSAEECVAMQQRIGEIEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHKVQTLARSLGLQMPSMYIFKQPHFGGEVSPHQDEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSDNSLFVPTPVQRGALVLIHGEV-----HKSKQNLSDRSRQAYTFHLMEASG.............................. 269
35 -12.8003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  7  36.DKTFQDGLKKEIEDSQP-GTIHELVNDDLLRAVRKEIETE--------------IHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMNTYTKGCHLLTHDDVGSRRISFILYLPDPDR-GLRL--PSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSF-HDVEEVKVDKHRLSIQYHIPQVGE.............................. 252
36 -12.7002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  13  26...................FLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTS------------------------TGTWFAKGEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDGPEHGGQRVVTMLMGGETVLPNAEQKVTGDGWSECAKRGLAVKPGDALMFDGSNDPASLHGSCP--LKGDKWSAT...................................... 215
37 -12.4005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  9  33...................EKIDGFLSDIECDVLINAAIK-----------------KGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGEHEVIDKIQKKTREFLSKKHCIDKYNFEDVQVARYKPGQYYYHHYDDACPKDQRLATL-------MVYLKAPEEGGGGETTLKTKIKPKKGTSIFFTRKLYKETLHAGLP--KSGEKIIAN...................................... 215
38 -12.4003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  10  17.DKTFQDGLKKEIEDSQP-GTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANL-----------SGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTD-MSINTYTKGCHLLTHDDVIG--SRRISFILYLPDPDRKWKSHSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSF-HDVEEVKVDKHRLSIQ...................................... 223
39 -12.3004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  9  36.................DGAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLA------DFIPDHVARVHNLVDFSHCFRHEILNHELLHKICRLTFEESG--DYWLGYGAVIENGPGTTEQKHRDAPEGMLNFFTALT-GKTQYILGSNK-ELGEPDADHPIEYVGLKPGDTTIVSGKI-----HRGSDNRSDKMRRAMPI..................................... 239
40 -12.3002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  12  34.................NGLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTL---PEILKYVECFTGPNIMAMH-------TMLINKPPDSGKKTSRHPLHQD--SDLIVCAWTAMEHILVVKMFHGIQDYEENKARVHLVMEKGDTVFFHPLL-----HGSGQNKTQGFRKAISCHFASADC.............................. 257
41 -12.3006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  8  32EKTWQLQKNERLSNMVVNQLIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIR----------GDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTK--CMVACYPGSGLGYIRHIDNPNRDGRCVTVL-LNPNWNSQDCGGQLWLYPNNENKVVKIDPIFDRLLLFWSDRRN---HEVKP--AYAMRYAITYFDEKERALSSQNGT....................... 251
42 -12.2004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  8  33.DKTFQDGLKKEIEDSQP-GTIHELVNDDLLRAVRKEIETE--------------IHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMNTYTKGCHLLTHDDVIG--SRRISFILYLPDPDRKWKSHSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSF-HDVEEVKVDKHRLSIQ...................................... 239
43 -12.2005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  12  38.................DGVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKRFSKLVTTSPTFRHEILENDL-----------------MHELLQRVFSKPGEGMGYHFNDTMVIEVQPGAP-RLHRDAPECLVNFFCAVT-GATRLVPGSNRATDCPQYGKIDSVPAIMQPGDCYMMSGKV-----HG-HNATLSDQRRALAFSTIRR................................ 246
44 -12.0005ybm_A mol:protein length:314 PrhA  ali model follow..  14  38.................DGVVIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKRFSKCVIASPTFRNEIIES-----------------DLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPQRLHRDGPECVINFFCAVT-GATRLVPGSHLERDCPQFGKIETVPAIMQPGDCYLMSGKV-----HG-HNATTTDRRRALALAIIRR................................ 246
45 -11.9005epa_A mol:protein length:279 SnoK  ali model follow..  11  29.................QGVHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQAWQKHPELRSLVLH--------------PEISGIALRLAGAPLRVYS-------SDILVKEPKRTLPTLVHDDETG--LSATLTAWIALTDVMSYRDLADVWPDYPWQPRVAVPVRAGDVVFHHCRT-----HMAEANTSDSVRMAHGVVYMDADA.............................. 238
46 -11.7006EC3 Entity 1(prereleased)  ali follow..  13  259.................DGVNAGPVFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLFR------PELAELAAAFVGSPVVPTA-------FALVLKEPKRAAGVPWHRDRANVAPHTVCNLSICLDTALEGPDDIDVPEIRDGGPRVPVPSKVGDVIVHDVRL-----HGSGPNPSDQWRRTIVIEFANPAISLPSLPS....................... 465
47 -11.7004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  10  23.........................LDQRRLTDDLAVLAKSNFSSEYSDFACGRWEFCMLRNQ---------KQEEQRVVVHETPALATPLGQSLP-YLNELLDNHFDRDSI------RYARIIRISENACIIPHRDYLELEGKFIVHLVLDTNEKCSNT------------ENNIFHMGRGEIWFLDASL----PHSA--CFSPTPRLHLVVDIEGTRSLEEVAINVEQPSARNATVDTRKEWTDETLE 218
48 -11.6005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  9  43...................VVLGNVLSDEECDELIELSKS------------------------------KLARSKVGSSRDVNDIRTSSGAFLDDNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDSRSAANNRISTL------VMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFDQSLNELTLHGGAP--TKGEKWIAT...................................... 208
49 -11.2005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  12  36.................DGVHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGA------------GTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENKEKDA-------SVPTAPHHDAFA--AGTALTAWVALVDVMTFWAGAFTRPGEIWMPRVTVPLRAGDCTFHHART-----HSAGANSTDEPRLSTSAVYMDATA.............................. 241
50 -11.1005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  11  17.................DGVLLEGAFSPEEVHVMRQALKKDQEVQGPHRILEEDGRTVRALYASHTRQSVFDQLSRS---------------DRLLGPATQLLECDLYIHQ-------FKINTKRAFGGDSWAWHQDTDGLPAPRAVNVGVFLSDVVVF-TPAELSQMVEKHPMVSPKAASGSVMLFHPEI-----HGSAPNISPFARDLLIITYNDVAN.............................. 236
51 -11.0002xdv_A mol:protein length:442 MYC-INDUCED NUCLEAR ANTIGEN  ali model follow..  10  33.....KEFWEQKPLLIQRDDYYGSLFKLTDLKSLCS----------RGMYYGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQP-QRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVF---ILQLELYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFRG-----TIHQADTPAGLAHSTHVTIS.................................... 234
52 -10.8005apa_A mol:protein length:220 ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE  ali model follow..  12  16.........SMRSLYNVNGLKAQPWWTPKETG-YTELVKSLERNWKLIRDEGLAVMDKAKGLFLPEDENLREKGDWSQFTLWQQGRRNENACKGAPK-----TCTLLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIKEGCKIRCANETKT--------------EEGKVLIFD----DSFEHEV--QDASSFRLIFIVDVWHPELTPQQRRSLP..................... 212
53 -10.7001e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  9  12.............................DQTRLAPDLAYLAAVPTVEEEYDEFSNGFWKHVPLWNASG---SEDRLYRDLKDAAAQPTAHVEHVP-YLKEIVTT-------VFDGTHLQMARSRNLKNAIVIPHRDFVELDREV-TFMVLEDSPLAFHS------------EDTVIHMRPGEIWFLDAAT----VHSAVNFS-EISRQSLCVDFAFDGPFDEKEIFADATLYAPGSTPDLPERRPFTAE 210
54 -10.6005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  10  31.................HGAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPN-------------HVLSTTTRLVNVLAPISKAYREDVLNSKVLHRICSDA--FHVYGDYWVLMGAVMELAPSNPAQPHRDMPATSINFLVALS-GATHVILGSHKWQNLSNVSMDATVRALMNPGDALLITDST-----HC-AETTGTETRRLLTI..................................... 229
55 -10.5003nnf_A mol:protein length:344 CurA  ali model follow..  8  34.................KGCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDID-----------TNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLM--------IMHNALFSVEPNHKGLPWHVGVGS----PLDKITKEHRGGMQYKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYV-----HQSVPPGLHKLRRAFVIRLVDYDT.............................. 271
56 -10.5004xbz_A mol:protein length:334 EvdO1  ali model follow..  11  49.................QGLVVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGH------PLLLRIMEQLVGPNLIPTW-------DSMVFKTPAGAPRLAWHRDAGL--AGRVIDAGIESNYWGDDRLTATADQLNDTTGAVPAVMQPGDLLLHNILT-----HGAPAVVGKQRRIYFEYRPAE................................. 259
57 -10.5004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  7  31.................DGFILKGLLPFDVVESFNRELDVQIPPPKGERLLADKYPPHFKYVPNVATTCPTFRNTVLINPV-----------------IHAICEAYFQRTGDY---WLSAAFLREIESGMPAQPHRDAPPVSLSVIFPLT-GATEVILGSHRWTEVGTPERDQAVLATMDPGDVLIVRQRV-----HA-NRTTAGKPRRVVLA..................................... 226
58 -10.4002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  9  31.................HGLFLRNVLDRDLVKTVAEQMREGLVALGAADPHATLEELTIDSFESVDEVAMH----------DYVKYDAFWNNPSTIKVFEQVF-PVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFY----PLIRTTRESGGVALADRGIPPTEVSEDEHLLHSPMEPGDILLFHAHM-----HKSIPNLSKDPRMSMDTRVQPAKS.............................. 255
59 -10.4005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  11  37.................DGVIVEQVICPNIIAKISDDVNRVMDKATIG----------AKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLN---PFAHEVLEKVFKK---SGDYWLNMGNILNMLPGAEAQRHRDDMDPATSPDLMINIGGTLLLPKSHT-NADFYANAEDLPAAEMQVGDALIFTGKC-----HGGGANRSDKPRIGLALAAQPG................................ 241
60 -10.3004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  10  46.................DGIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQSNEIR-----------SIFEIHAQSPVMARLAADARLADVARFLLGDEVYIHQ-------SRLNYKPGFKGREFYWHSDEDGMPRMRALSMSVLKKQEYGVPDEESLAELAHRHGIVAPTGKPGTVILFDCNL-----HGSNGNITPFPRANAFLVYNAVSN.............................. 270
61 -10.1003emr_A mol:protein length:310 EctD  ali model follow..  12  46.................NGLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPESNDIR-----------SIFHVHQDDNYFQDVANDKRILDIVRHLLGSDVYVHQ-------SRINYKPGFKGKEFDWHSDEDGMPRMRAISVSIALSDNLMLDEESLRELTRIGGGISVPTGKAGSVTLFESNT-----HGSTSNITPYPRNNLFMVYNSVKN.............................. 271
62 -9.7901vrb_A mol:protein length:342 Putative asparaginyl hydroxylase  ali model follow..  8  3SDKIMSAVTESVLESIISPVTMSEFLEE-GFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRR-----WIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNL-----IFQIQGEKTWKLAKNENVSNPEDLPDAEIVNLTPGTMLYLRG-----LWHSTKSDQ-ATLALNITFGQ................................... 247
63 -9.5005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  9  31.................DGVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSS--------------LFSKLFRDELMNDELLHGLCKRLFGPESGDYWL------TTSSVLETEPGYH-ELHRESPESMLNFLTALT-GATRVLPGSHLWEDAPPPKADTAIPAVMNPGDAVLFTGKT-----HGAGKNNTTDFRRGFPL..................................... 227
64 -9.3404nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  8  78...................CVIPNFIQSQDLEGLQKELMNLDFHEKYNDLYKF-------------------------QQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELE--GRRIAFILYLVP-TLDL----SIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSF-HQVSEVLSEEKRLSIS...................................... 248
65 -9.3404xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  8  18.................TGLVIPGVFGSGEVESFRSELERLDTVDPGFPRTRRYPDLPAASPVF----------ARLALDDRLLAPVRDVVNQPLRLLEGYGLRRTKDSVLYLHGGNSELYLSDIQSPEDG-GSH------------KANFPLLRERAERGENTSLVDSGFPTLSDVFVRSGDVLLLNEAL-----HGTRRKLTEGDRLLTAFG.................................... 226
66 -9.3104y4r_A mol:protein length:454 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66  ali model follow..  13  45.....RRLWEREAVLVRRQDYYQGLFSTADLDSMLRNAARYINGRRETLNPPGRALPAAAWSLYQAGCSLRLLC---------------------PQAFSTTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIEAF-----VLQLEGRKLWRVYRPRVPTEDDLGEPVLQTVLEPGDLLYFRG-----FIHQAECQD-GVHSLHLTLS.................................... 246
67 -9.3104csw_A mol:protein length:406 CUPIN 4 FAMILY PROTEIN  ali model follow..  11  16..............TILGGLAPEEFLAN-QKRPLLPGFRSPITPEELAGLACEEGVTARLILEKGGAYPWEVRYGPFEPEDFVALPPTHWTL---VDRLVPEVAALLETVRFVPNWRLDDIMVSYAPEGGTVGAHIDNYDVF-----LVQAWGRRRWQIVPGLEVRLLAHFEPDAEWILEPGDVLYLPR-----IPHYGVALE-DCMTFSIGFR.................................... 222
68 -9.1804nub_A mol:protein length:384 50S ribosomal protein L16 arginine hydroxylase  ali model follow..  12  14.....ERHWQKRPVVLKRGFNFIDPISPDELAGLAMEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQA---------------------VNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYDVF---IIQGTGAALQMKQHCPHPDLLQVDPFEAIIDEELEPGDILYIPG-----FPHEGYALE-NAMNYSVGFR.................................... 203
69 -9.1204diq_A mol:protein length:489 Lysine-specific demethylase NO66  ali model follow..  13  61.....RRLWEREAVLVRRQ-YYQGLFSTADLDSMLRNAARYINGRRETLNPPGRALPAAAWSLYQAGCSLRLLC---------------------PQAFSTTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIEAF-----VLQLEGRKLWRVYRPRAPTEDDLGEPVLQTVLEPGDLLYFRG-----FIHQAECQD-GVHSLHLTLS.................................... 262
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.