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Query: 4qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEASMAIMRRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDEESFFGERRIPRGRRISVICRSLPEGMGPGESGLast
1 -108.0004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model  100  1MWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEASMAIMRRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDEESFFGERRIPRGRRISVICRSLPEGMGPGESG 200
2 -70.3003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  17  99...VQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTKHRRVKHFGYEFHYENNNVDKDKPGLPDICESFLEKWLRKGYI--KHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPDGI--AVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVDLTLSKRGLRTSFTFRKVRQTPCNCSY. 321
3 -65.7004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  15  3...QLQKEEEARKVKSGIRQ-MRLFSQDECAKIEARIDEVVLRNKYFFGEGYTYGAQLQKRGVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDI---------KERRAVIILRKTRLDAPRLET. 222
4 -64.9004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  16  35............RKVKSGIRQMRLFSQDECAKIEARIDEVVLRNKYFFGEGYTYGAQLQKRGVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIK---------ERRAVIILRKTRLDAPR.... 243
5 -63.3004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  16  10.......DAEARRVKSGIKQ-ASIFTLEECARIEAKIDEAPLRNKYFFGEGYTYGAQYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKRVSEPVLHLPVRRGSVTVLSGYAADDITHCIRPQDI---------KERRAVIILRKTRADAPRLDS. 225
6 -50.3004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  17  2...........EPLAAGAVILRRFAFNAAEQLIRDINDGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYP-DFQPDACLINRYAPGAKLCLHQDIHPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGF---HPLTIDCRYNLTFRQAGKKE...... 205
7 -49.8003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  16  7..LFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYP-DFQPDACLINRYAPGAKLSLHQDDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGF---HPLTIDCRYNLTFRQAGKKE...... 219
8 -49.7002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  17  3...........EPLAAGAVILRRFAFNAAEQLIRDINDGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYP-DFQPDACLINRYAPGAKLSLHQDDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGF---HPLTIDCRYNLTFRQAGKKEN..... 207
9 -48.7003h8o_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  15  1....GSHSWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGAFGKWHSVPRTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHIGEHRDDCRELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKK--------VLAPRVNLTFRKILLTKK..... 209
10 -48.6003rzg_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  15  1....GSMSWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGAFGKWHSVPRTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHICEHRDDERDLASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKK--------VLAPRVNLTFRKILLTKK..... 209
11 -48.6004mgt_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  15  2.......SWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGAFGKWHSVPATYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKK--------VLAPRVNLTFRKILLG....... 205
12 -48.2003rzm_A mol:protein length:206 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  14  10...............GLDSSYTVLFGKAEADEIFQELEKEVEYFTGAFGKWHSVPRTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKK--------VLAPRVNLTFRKILLTA...... 206
13 -47.5004mg2_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  14  2.......SWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGDHICEHRDDERELASPIASVSFGASRDFVFRHKDSRGAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKK--------VLAPRVNLTFRKI.......... 202
14 -46.6005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  15  1.....KEAAPLQYLRPGMVLLKKFLKHDDQVDIIRRCQKKLSLQMMCLGKNWDPNSRKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIF-HGVSRIKPKTLTDEAKLRPGRLNLTFRQ........... 230
15 -45.2002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  14  23....VYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTEDITYQQPRPYTYSRITMEPPHWHPVLRTLKNRIEENTGHTFNSLLCNLYRNEDSVDWHSDDEPSLGPIIASLSFGATRTFEMRKKPPPEERVKIPLDHGTLLIMEGATQADWQHRVPKEYH--------SREPRVNLTFRTVYPDPRG.... 229
16 -26.2003lfm_A mol:protein length:495 Protein fto  ali model follow..  12  161..................................................................PRVGMGSSYNGQDEVDIKSRAAYNVTLLNFFGMGKAVSWHHDENLVDRSAVYSYSCEGPEEESEDDSHLEGRGLAIPLHQGDCYFMLDDLNATHQHCVLAGS-----------QPRFSSTHRVAECSTGTLDY. 317
17 -18.9003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  13  2....GSDKIENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDDGMIRTDLSATLFLGGELVI-----QDTYGQQSIKLSAGSLVLYPSSS----LHQVTP----------VLSGERTAAF.............. 184
18 -16.0004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  11  109.................LAYLPNVLPKELVEEFTEKFESIQTGRKKDTGYTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYAGHRIRKPHKDNLDITPSSLFYFG-EGYLEL-------TDKNCKVFVQPGDVLFFKGNE---YKHVVAN----------ITSGWRIGLVY............. 294
19 -15.6005iqs_A mol:protein length:315 WelO5  ali model follow..  11  43..YPTAIQDIIINRSFDGMIIRGVFPRDTMEQVARCLEEGQSPDLKDYFASSAIFRQACRTMFQGSPDFEEQVESIFHSLPTGPEGQTYTPATIRLLLEGREIAVHVGNDFLLMPLSYFIPLGGELVVEFKIKSNQSQSVAYAPGPGDMLLFNGG---RYYHRVSEVIGN---------SPRRTIG.............. 292
20 -15.5002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  10  14...LALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD-CETIGLLMSSMDDLIRHCNGKLGSAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNK--ILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAYAT-----------RYAIT.............. 208
21 -15.0004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  10  12...LALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD-CETIGLLMSSMDDLIRHCNGKLGSAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNK--ILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAYAT-----------RYAIT.............. 206
22 -14.8002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  30..............KHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD-KEPGCETIGLLMSSMDDLIRHCNGKLVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNK--ILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAYAT-----------RYAIT.............. 213
23 -14.7005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  12  30...............KYYEKIDGFLSDIECDVLINAAIKKGLIKSETENDPIKLDPKSRNSEQTWFMPGEHEVIDKIQKKTREFLNYNFEDVQVARYKPGQYYYHHYDDACPKDQRLATLMVYLKAPEEGGGGETDFPTLKTKIKPKVADPVTRKLYKETLHA----------GLPVKSGEKIIAN.............. 215
24 -14.6005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  10  19...LALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD-CETIGLLMSSMDDLICHCNGKLGSAMVACYPGNGTGYVRHVDNCNGDGRCVTCIYYLNK--ILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAYAT-----------RYAIT.............. 213
25 -14.6002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  10  8...LALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD-CETIGLLMSSMDDLIRHCNGKLGSAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNK--ILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAYAT-----------RYAIT.............. 202
26 -14.5004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  12  35..............THGWSQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATQEVRETIRG-AEACDQYLAAMDQLRLAINQGLFFECHFALYPPGAFYRRHLDRFRDDDRRMVSAVL------QLRMFLADGVEHDVEPVAGCLVVFLSG---EVPHEVLPAGRE-----------RLSLT.............. 212
27 -14.2005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  10  32................GICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD-CETIGLLMSSMDDLVLHCNGKLGSAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNK--ILRIFPEGKAQFADIEPKFDRLLFFWSDRRN---HEVQPAYAT-----------RYAIT.............. 213
28 -14.2006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  10  44.....SNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRGIKYLSSCVDSLISRCNGRLGNYMITGRTCMVACYPGSGLGYIRHIDNPNRDGRCVTVLYYLNP--QLWLYPNNENKVVKIDPIFDRLLLFWSDRRN---HEVKPAYAM-----------RYAITYFDEKERALSSQNG 250
29 -14.1006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  10  43..LQNFKDFDYTEICNDVYSFP-LFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLFVVKYDMERQLAPHHDS-STYTLNIALNEYGKE--CEFIRHKF----IWQGQKVGYATIHAGKLLA--YHR----------ALPITSGKRYILV.............. 225
30 -13.9005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  15  40...............PLIVVLGNVLSDEECDELIELSKSKLARSKVGSSRDVNDIRTSSGAFLDD--NELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDSRSAANNRISTLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFDQSLNELTLHG----------GAPVTKGEKWIAT.............. 208
31 -13.9004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  10  8.....RAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVEELAQLAAAFVDGPVVPTAYALVLKEPYRAAEVPWHRDRVNVGPRTVCNLSICLDDA-EVAKVRATGPVVPVPVSQGDVVVHDVRL----VHGSGPNANG---------SWRRTIVIEYADPAA...... 219
32 -13.8005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  14  15....ALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSGHEPGCRSIGALMAHVDAVIRHCAGRLGSAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQ--LLQIFPEGRPVVANIEPLFDRLLIFWSDRRN--PHEVKPAYAT-----------RYAIT.............. 208
33 -13.6002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  13  23...............PRAFLLKNFLSDEECDYIVEKARPKMVKSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLENLQVLHYHDGQKYEPHYDGPEHGGQRVVTMLMGGETVLPNAEQKVTGDGLAVKPIKGDALMFDGSNDPASLHG----------SCPTLKGDKWSAT.............. 215
34 -13.5003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  11  40..QDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLYSKQYRDFFGYVTKAGKLSGSKT--DMSINTYTKGCHLLTHDDVIG--SRRISFILYGGLRLFPSILPNVPHSDPSAKLVPNQIAFFKVLPGFSF-HDVEE---------VKVDKHRLSIQ.............. 242
35 -13.4004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  11  37..QDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLYSKQYRDFFGYVTKAGKLSGSKT--DMSINTYTKGCHLLTHDDVIG--SRRISFILYGGLRLFPSILPNVPHSDPSAKLVPNQIAFFKVLPGFSF-HDVEE---------VKVDKHRLSIQ.............. 239
36 -13.0003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  11  21..QDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLYSKQYRDFFGYVTKAGKLSGSKT--DMSINTYTKGCHLLTHDDVIG--SRRISFILYGGLRLFPSILPNVPHSDPSAKLVPNQIAFFKVLPGFSF-HDVEE---------VKVDKHRLSIQ.............. 223
37 -12.7005ybm_A mol:protein length:314 PrhA  ali model follow..  13  26...ASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKRRNEIIESDLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPAQRHRDGPECVINFFCAVT-GATRLVPGSHLFGKIETVPAIMQPGDCYLMSGKV-----HGAGHNATT--------TDRRRALALAIIRRELRPMQ.. 252
38 -12.5005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  10  26...APADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKRRHEILENDLMHELLQRVFSKPGEGMGYHFNDTMVIEVQPGAP-RLHRDAPECLVNFFCAVT-GATRLVPGSNRYGKIDSVPAIMQPGDCYMMSGKV-----HG---------GHNATLSDQRRALAFSTIRRELRPVQ.. 252
39 -12.3004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  12  24...SDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLADFIPDHVARVHNLVDFSHCFRHEILNHELLVIENGPGTTEQKHRDAPEGMLNFFTALT-GSNKRVELGEPDADHPIEYVGLKPGDTTIVSGKI-----HR---------GSDNRSDKMRRAMPIMIIPSILTPFD.. 250
40 -11.8003nnf_A mol:protein length:344 CurA  ali model follow..  24.....VEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDFIQEKLALLNYITGKNLMIMHNALFSVEPNHKGLPWHVGVGSF---PLDKITKEHRGGMQYIDYTIKDGYEEDEYNLGDAFFFNKYV----LHQSVPLKPG-------LHKLRRAFVIRLVDYDT...... 271
41 -11.7004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  12  64....SHEVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELE---AFILYLV-GTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSF-HQVSEVLSE--------EKSRLSIS.............. 248
42 -11.5004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  12  16.RILGVVQLDQRRLTDDLAVLAKSNFSSEYSDF-EFCMLRNQSGKQEEQRVVVHETPALATPLGQSLPYLNELLDNH------FDRDSIRYARIIRISENACIIPHRDYLELEGKFIVHLVLDTNEKCSNTEENN-----IFHMGRGEIWFLDASL----PHSAGCFSPT----------PRLHLVV............. 181
43 -11.4004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  15  19...ADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADKYPPHFKYVPNVATTCPTFRNTVLINPVIHADYWLSAAFLREIESGMPAQPHRDAPPVSLSVIFPLTILGSHRWTEVGTPERDQAVLATMDPGDVLIVRQRV-----HAGGGNRTT-------AGKPRRVVLA............. 226
44 -11.3001e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  1....................MRSHILGKDQTRLAPDLAYLAAVPTVEEEYDEFSNGFWKHVPLAAQPTAHVEHVPYLKEIVTTVFDGTHLQMARSRNLKNAIVIPHRDFVELDREV-TFMVLEDSPLAFHSNEDT-----VIHMRPGEIWFLDAAT----VHSAVNFSEI----------SRQSLCV............. 173
45 -11.3003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  10  18..AEHMTIAAAIHALDADAIVMDIVPDGERDAWWDDEGFSIVATSVTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRTTIGHDYEVEFLLATRRVYEPFEAFAPHCDDVSY-RQLGGFLTIDAGMVM--IAALERAAKIMLKPQPGQLTLFQSKN----LHAIERCT-----------STRRTMG.............. 259
46 -11.0006EC3 Entity 1(prereleased)  ali follow..  10  249.....LGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYRIHPELAELAAAFVGSPVVPTAFALVLKEPKRAAGVPWHRDRANVAPHTVCNLSICLPDDIDVPEIRDGGPRVPVPSKVGDVIVHDVRL----VHGSGPNPSD---------QWRRTIVIEFANPAI...... 458
47 -11.0002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  11  18..LGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMREGLVALGAADPHATLEELTIDSFESPSTIKVFEQVFEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIGPNRTFWIPLGGVALADGSHRSEDEHLLHSPMEPGDILLFHAHM----CHKSIPNLSKD------PRLMRMSMDTRVQPAKS...... 255
48 -10.8005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  11  25...QGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLPFAHEVLEKVFKKDSGDYNMGNILNMLPGAEAQRHRDDPDLMINITFPLN-KSHTGPNADFYANAEDLPAAEMQVGDALIFTGKC-----HG---------GGANRSDKPRIGLALAAQPGYLTPRE.. 247
49 -10.6005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  14  19...NDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLSTTTRLVNVLASKVLHRICSDAFHVYGDWVLMGAVMELAPSNPAQPHRDMPATSINFLVALS-GATHVILGSHKVSMDATVRALMNPGDALLITDST-----HC---------GAETTGTETRRLLTI............. 229
50 -10.5002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  11  5.....SPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDAS-----AVEDATLENGCLWFIEPARDNSLFVPTPVQRGALVLIHGEV----VHKSKQNLSD---------RSRQAYTFHLMEASGTT.... 271
51 -10.3005epa_A mol:protein length:279 SnoK  ali model follow..  12  19.....SKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQAWQKHPEPEISGIALRLAGAPLRVYSSDILVKEPKRTLPTLVHDDETELSATLTAWIALGSHLLADVWPDYPWQPRVAVPVRAGDVVFHHCRT----VHMAEANTSD---------SVRMAHGVVYMDADA...... 238
52 -10.3004xbz_A mol:protein length:334 EvdO1  ali model follow..  10  39.....LPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEPLLLRIMEQLVGPNLIPTWDSMVFKTPAGAPRLAWHRDAGRVIDAGIYLDPAPEDNCVWCIPESDTTGAVPAVMQPGDLLLHNILT----LHGAPAVVGK----------QRRVIYFEYRPAEV...... 260
53 -10.2004xab_A mol:protein length:252 EvdO2  ali model follow..  13  11.....DHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIFARCRSIASAFLDMAEEELGHAILKPPRYGAPTPWHQDERWRRRGLSIWTTLGGHRGPVLPHHHDPTSAVACPLAPGGAVVHDFRT----PHYAGPNLTD---------QPRRAYVLVFMSAPA...... 238
54 -10.1002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  24.....TLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHSDLIVCAWTANKMFHGIQDYEENKARVHLVMEKGDTVFFHPLL----IHGSGQNKTQ---------GFRKAISCHFASADC...... 257
55 -10.1005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  7.....TADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQEVQGPHRILEEDGRTVRALYASHTRQSVFDRLLGPATQLLECDLYIHQFKINTKRAFGGDSWAWHQDTDGLPAPRAVNVGVFLSDV-ELSQMVEKHPMVSPKAASGSVMLFHPEI----IHGSAPNISP---------FARDLLIIT............ 230
56 -10.0002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  11  14...................LYHAPLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYAS--FPIFADLVKSLDAHVAAFAEDL-INILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPRTFRSVAPKVGDVLLWESWLR----HEVPMNMAE---------EDRISVSFNYAWGE....... 209
57 -9.9803gja_A mol:protein length:319 CytC3  ali model follow..  11  13.....SPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGKANISNYDRHLDIDLLAEHIVDRVGSLIGRNLLCWRSEFFPKYQGDEGTDWHQARPAFIGTITVWTAFGTHTSMNYDESKDESQAYPMVLKPGEAVIFWSNT----MHASLPHTGS-------KTDYRMGFAARYVPTQV...... 265
58 -9.9705ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  13  26.....LERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTVMDYVADAQLGSDTMRRLIAALAEYLAGSPLRLFKLEVLLK-DASVPTAPHHDAF---AGTALTAWVALVDVMTFRPGEIWMPRVTVPLRAGDCTFHHART----VHSAGANSTD---------EPRLSTSAVYMDATA...... 241
59 -9.9403bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  11  15....................LSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGELEDLWINILPEGGSHASHIHPHSVISGTTYVSMPGGTSALKLEDPRELRQFIYVTPAVGDVLLWESWLR----HEVPMNMSE---------DDRISVSFN............ 200
60 -9.7805m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  15  19...AGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSNDELLHGLCKRLFGPEDYWLTTSSVLETEPGYH-ELHRESPESMLNFLTALT-GATRVLPGSHPPKADTAIPAVMNPGDAVLFTGKT-----HG---------GKNNTTDFLRRGFPLIMQSCQFTPVE.. 238
61 -9.3504nub_A mol:protein length:384 50S ribosomal protein L16 arginine hydroxylase  ali model follow..  12  12.FLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHGPFESSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYD-----VFIIQGTGRRRWRVGAALQMEAIIDEELEPGDILYIP-----GFPH----------EGYALENAMNYSVGFR............ 203
62 -9.3104lit_A mol:protein length:407 50S ribosomal protein L16 arginine hydroxylase  ali model follow..  12  40.FLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHGPFESSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYD-----VFIIQGTGRRRWRVGEKLQMEAIIDEELEPGDILYIP-----GFPH----------EGYALENAMNYSVGFR............ 231
63 -9.1402yu1_A mol:protein length:451 JmjC domain-containing histone demethylation protein 1A  ali model follow..  12  123....................MAQWTREEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLM--VRGCYTDFHVD---FGGTSVWYHIHQGGKVFWLIPPTAHNLELRIELKQGYTFVIPS----GWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRT.... 318
64 -9.1103ptr_B mol:protein length:392 PHD finger protein 2  ali model follow..  100..VDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALL-------------AKPKVTKYCLICVKDSYTDFHID---SGGASAWYHVLKGEKTFYLIRPASANKCYKCIVKQGQTLFIPSG----WIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRL.... 296
65 -9.0404mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  12  36.....SARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQSNEIRSIFEIHAQSPVMARLAADARLADVAR-SRLNYKPGFKGREFYWHSDGMPRMRALSMSVLLAENTPHNLAELAHRHGIVAPTGKPGTVILFDCNL----MHGSNGNITP---------FPRANAFLVYNAVSN...... 270

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.