FFAS03 results for 4qnzA

Query: 4qnz_A mol:protein length:200 Rhomboid protease GlpG, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200`
#	Score	Template	Links and tools	%id	First	`AALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHISLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRKASLERENLYF`	Last
1	-88.600	`4qnz_A mol:protein length:200 Rhomboid protease GlpG`	`ali model`	100	1	`AALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHISLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRKASLERENLYF`	200
2	-83.100	`4njn_A mol:protein length:211 Rhomboid protease GlpG`	`ali model follow..`	99	16	`AALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK..........`	205
3	-81.100	`2nr9_A mol:protein length:196 Protein glpG homolog`	`ali model follow..`	34	2	`ENFLAQQGKITLILTALCVLIYIAQQLGFEDDIMYLMHYPAYEEQDSEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYVSGPAFFGLSGVVYAVLGYVFIRDKLNHHLFDLPEGFFTMLLVGIALGFISPLFGVEMGNAAHISGLIVGLIWGFIDSKLRKNSLELVPR.....`	196
4	-9.040	`5xtc_V mol:protein length:140 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11`	`ali model follow..`	11	3	`......................................................................................KVFRQYWDIPDGTDCHRKAYSTTSIASVAGLTAAAYRVTLNPPGTFLEGVAKVGQYTFTAAAVGAVFGLTTCISAHVREKPDLGGCAGGLTLGA....................`	102
5	-8.630	`6g2j_Y mol:protein length:143 MCG5603`	`ali model follow..`	13	11	`...........................................................................................YHEVPDGTQCHRKTYITTALGGICGIIGSAYSVSLNPADSTLEAVARVGRYTFTAAAIGAMFGLTTCVSAQVREKPDIGGCAGGLTLGA....................`	105
6	-8.330	`5gup_V mol:protein length:141 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11`	`ali model follow..`	13	9	`...........................................................................................YSDIPEGTECHRKAYASTSIGGATGLIVSAYSIALKPPASFLEGVARTGRYTFTSAAIGAIFGLTSCISAQVREKPDIGGCAGGLTLGA....................`	103
7	-8.310	`5ldw_Y mol:protein length:141 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11`	`ali model follow..`	14	9	`...........................................................................................YWDIPEGTECHRKTYATTSIGGAAGLVVSAYSVALKTPTSFLEGVARTGRYTFTAAAIGAIFGLTSCISAQVREKPDIGGCAGGLILGA....................`	103
8	-7.470	`5glh_A mol:protein length:498 Endothelin Receptor Subtype-B`	`ali model follow..`	12	38	`.........FKYINTVVSCLVFVLGIIGNSTLLY--------IIYKNKCMRNGPNILISLALGDLLHIVIAIWPFGAEM-------KLVPFIQKASVGITVLSL------------CALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSVVLAV..........................................`	172
9	-7.330	`6gcs_J mol:protein length:198 NUJM SUBUNIT`	`ali model follow..`	10	26	`.........................................................................................................LGLATQSAMVGLGAGVVAAAASLATGPRNILTTFSKSGGVVTIFTGASIAYVFTYCSAANLREWAGAATGAVLGA....................`	110
10	-7.330	`5gli_A mol:protein length:464 Endothelin Receptor Subtype-B`	`ali model follow..`	12	38	`.........FKYINTVVSCLVFVLGIIGNSTLLY--------IIYKNKCMRNGPNILISLALGDLLHIVIAIWPFGAEM-------KLVPFIQKASVGITVLSL------------CALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSVVLAV..........................................`	172

FFAS is supported by the NIH grant R01-GM087218-01

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