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Query: 4r42_A mol:protein length:236 Alr3090 protein, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVFHKKEPIHVVNIGEANPRFAQLLLEQFGGATGELSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEAYKSTLFAVRGMGPHFLDSQGNAWTASYLNEGGDVVRDLRANIAAEAGARQTYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLGKLTDPFFGNVQPDETVALYYNLSSNGNGHDERGPWNSEPAFKYVANPLEKHSLast
1 -85.8004r42_A mol:protein length:236 Alr3090 protein  ali model  100  1MVFHKKEPIHVVNIGEANPRFAQLLLEQFGGATGELSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEAYKSTLFAVRGMGPHFLDSQGNAWTASYLNEGGDVVRDLRANIAAEAGARQTYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLGKLTDPFFGNVQPDETVALYYNLSSNGNGHDERGPWNSEPAFKYVANPLEKHS 230
2 -62.2001jku_A mol:protein length:266 pseudocatalase  ali model follow..  26  1MFKHTRKLQYNAKPDRSDPIMARRLQESLGGQWGETTGMMSYLSQGWASTGEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMTEDEGVRDMLKFLLARETQHQLQFMKAQEELEEKVPGDMKEIEHSEFSHVLMNFSDGDGSKAFEGQVAKDEKFTYQENPEAMGG 250
3 -55.3002cwl_A mol:protein length:302 manganese-free pseudocatalase  ali model follow..  20  1MFLRIDRQIELPMPKEQDPNAAAAVQALLGGRFGEMSTLMNYMYQSFNFRGKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMTDNPVAREMIGYLLVRGGVHAAAYGKALESLTGVESKIPEAKKYMDLGFHRNLYRFSPEDYRDLGLIWKGTEVVVVDGPPTGGP 270
4 -42.8002fzf_A mol:protein length:175 hypothetical protein  ali model follow..  18  17................ADFSLEELLGMAIK---AEIGAREFYKSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQP-------------VARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLLNWEMY............................................... 167
5 -39.4001vjx_A mol:protein length:157 putative ferritin-like diiron-carboxylate protein TM1526  ali model follow..  14  2................GSDKIMKVSDILTVAIRLEEEGERFYRELSEHF-NGEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVF-----------PDTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKDGLVNSDAQKTVKKIIDQEKEHLRKLLEMKREST.................................................... 151
6 -39.1002oh3_A mol:protein length:167 COG1633: Uncharacterized conserved protein  ali model follow..  15  4..................YTLAEFLAHAIA---LETEAAERYVELADMMENLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWK-------------TPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTPRPSITWSEDADPAQCVD................................... 167
7 -37.5003sid_A mol:protein length:180 Symerythrin  ali model follow..  13  16..........FFQDAVSHNNTDANAASSIEVEMYEDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKR-----------LVSTIESQIDAVASDSRGLRRALETALEVETIESQAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEVA................................................. 180
8 -36.2002clb_A mol:protein length:188 DPS-LIKE PROTEIN  ali model follow..  17  23.................IKKLVDKLVKATAAEFTTYYYYTILRMHLTGMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISACS--------------DAYLPENWKDPKEILKVLLEAEQCAIRTWKEVCDMTYDPRTYDLAQRILQEEIEHEAWFLELLYGRPSGH................................................. 174
9 -36.0003q4o_A mol:protein length:196 Uncharacterized protein MJ0754  ali model follow..  15  12..........GSHMQPISEEEKEGLIEMR---EEEKLARDVYLTLYNKWK----LQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFS---------NPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSN.................................................. 165
10 -35.8001nf4_A mol:protein length:179 bacterioferritin  ali model follow..  13  6..............EDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQ-------------------------KEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGD................................................ 151
11 -34.9002qqy_A mol:protein length:149 Sigma B operon  ali model follow..  11  4.............MSHDVKELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTT--------------------------IPLRVKQAEDVREMLEYARQSEYETIKRYEKRKEQAAMTELVVKLEDMIADETNHMEELDRLLNDKA.................................................... 145
12 -34.7003q4n_A mol:protein length:193 Uncharacterized protein MJ0754  ali model follow..  15  7..........SLPKQPISEEEKEGLIEMR---EEEKLARDVYLTLYNKWK----LQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFS---------NPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSN.................................................. 160
13 -34.1003gvy_A mol:protein length:161 Bacterioferritin  ali model follow..  18  2...............QGDAKVIEYLNAALRSELTAVSQYWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRL-------------------------NPLRIGQTLRETLDADLAAEHDARTLYIEARDHCRDYPSKMLFEELIADEEGHIDYLETQIDLMGSIG................................................. 145
14 -34.1005xx9_A mol:protein length:167 Bacterioferritin  ali model follow..  15  2...............QGDPEVIEFLNEQLTAELTAINQYFLHAKLQDHKGWTKLAKYTRAESFDEMRHAEVLTDRILLLDGLPNYQRL-------------------------FHVRVGQSVTEMFQADREVELEAIDRLRRGIEVMHDITSANVFEAILADEEHHIDYLETQLDLIEKLG................................................. 145
15 -34.0002wtl_A mol:protein length:173 BACTERIOFERRITIN  ali model follow..  15  6...............QGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRI-------------------------GSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLG................................................. 149
16 -33.8001jgc_A mol:protein length:161 bacterioferritin  ali model follow..  15  2...............KGDAKVIEFLNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKL-------------------------DPLRIGEGPRETLECDLAGEHDALKLYREARDYCGDIVSKNIFESLITDEEGHVDFLETQISLYDRLG................................................. 145
17 -33.8003fvb_A mol:protein length:182 Bacterioferritin  ali model follow..  21  17...............KGEPKVIERLNEALFLELGAVNQYWLHYRLLNDWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTV-------------------------SPLRIGQNVKEVLEADLKGEYDARASYKESREICGDYVSKQLFDELLADEEGHIDFLETQLDLLAKIG................................................. 160
18 -33.7003bkn_A mol:protein length:161 Bacterioferritin  ali model follow..  17  2...............QGDPDVLKLLNEQLTSELTAINQYFLHSKMQDNWGFTELAEHTRAESFEEMRHAETITDRILLLDGLPNYQRL-------------------------FSLRVGQTLREQFEADLAIEYEVLERLKPGIVLCQDATSARLLEQILADEETHIDYLETQLQLMDKLG................................................. 145
19 -33.6002vzb_A mol:protein length:170 PUTATIVE BACTERIOFERRITIN-RELATED PROTEIN  ali model follow..  16  15.................VKSLIDQLNAALSEEWLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELARC----------------KYDSPTAFDSVSLLNQNVSSERCAILRYQEIANFTNDYTTCDIAKHILAEEEEHEQDLQDYLTDIARMKESFLKK........................................... 170
20 -33.6004am2_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  17  2...............KGDQKVIEYLNRGLRSELTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTL-------------------------DPLRIGQTVKEVLESDLAAEREARALYQEGAAYAGDFPSKNLFEELMGDEEHHIDFLETQLDLVSKLGLELYAQHHIGKLDD................................... 159
21 -33.5003qb9_A mol:protein length:174 Bacterioferritin  ali model follow..  15  4...............QGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRI-------------------------GSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLG................................................. 147
22 -33.3004di0_A mol:protein length:144 Rubrerythrin  ali model follow..  17  2.........PGSMAQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPAT-------------------------------LPFGTSRQNLQSAIAGETHEYTDMYPGMAKTARFEEIANWFETLAKAERSHANRYTKALDGLVD................................................... 144
23 -33.0001sof_A mol:protein length:156 Bacterioferritin  ali model follow..  16  2...............KGDKIVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQEL-------------------------GKLLIGEHTKEMLECDLKLEQAGLPDLKAAIAYCGDYASRELLEDILESEEDHIDWLETQLDLIDKIGLENYLQSQMDE...................................... 156
24 -32.6005zur_A mol:protein length:158 Bacterioferritin  ali model follow..  15  2...............KGDKTVIQFLNKQLTNELTAINQYFLHARMLNHWGFDKLGKHEYEESIGEMKHADRLIARIFMLDGLPNLQDL-------------------------HKLLIGEDVPELLACDLKLEQAAHATVREAIAHCRDYVSRDLFQDILDDTEEHIDYLETQIDLIDKVG................................................. 145
25 -32.4001bcf_A mol:protein length:158 BACTERIOFERRITIN  ali model follow..  17  2...............KGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDL-------------------------GKLNIGEDVEEMLRSDLALELDGAKNLREAIGYAHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREE..................................... 157
26 -32.4003e2c_A mol:protein length:158 Bacterioferritin  ali model follow..  17  2...............KGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDL-------------------------GKLNIGEDVEEMLRSDLALELDGAKNLREAIGYAHDYVSRDMMIEILRDERGHIDWLRTELDLIQKMGLQNYLQAQIREE..................................... 157
27 -32.3004tof_A mol:protein length:158 Bacterioferritin  ali model follow..  14  2...............KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDL-------------------------GKLLIGENTQEMLQSDLNLELCATKDLREAIVHCHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHEDD.................................... 158
28 -32.1003is7_A mol:protein length:158 Bacterioferritin  ali model follow..  14  2...............KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDL-------------------------GKLLIGENTQEMLQCDLNLELKATKDLREAIVHCHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHEDD.................................... 158
29 -32.0004cvp_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  17  3...............KGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYRESIDEMKHADRYIERILFLEGLPNLQDL-------------------------GKLNIGEDVEEMLRSDLALELDGAKNLREAIGYARDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREE..................................... 158
30 -32.0005d8x_A mol:protein length:158 Ferroxidase  ali model follow..  14  2...............KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGAPNLQDL-------------------------GKLLIGANTQEMLQCDLNLELKATKDLREAIVHCHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHEDD.................................... 158
31 -31.1001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  19  2.............KDLKGTKTAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATD-----------------------------KPIGTLEQMIESAIAGETEWTQMYPGFAKVARFPEVAEWFETLARAEKSHAEKFQNVLKQLKG................................................... 142
32 -29.9001yux_A mol:protein length:202 Nigerythrin  ali model follow..  9  21............DSKTSVGSTLENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTV-------------------------AAPSAYSCDLNLISGANGEIYETSDMYPAFIRKAQNSKAVHVFTRAKLAESVHAERYLAAYNDIDAPD................................................. 167
33 -29.7004z5s_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  16  2.....PELAVRTEFDYSSEIYKDAYSRINAIIEGEQEAYSNYLQMAELL--PEDKEELTRLAKMENRHKKGFQACGNNLQVNPDMPYAQEF--------------AGLHGNFQHAFSEGKVVTCLLIQALIIEAFAIAAYNIYIPVA-DDFARKITEGVVKDEYTHLNYGEEWLKANFAT.................................................. 161
34 -29.5005uxi_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  15  1MQQLTDQS-LDFKSETYKDAYSRINAIVIEG---EQEAHENYITLAQLL--PESHDELIRLSKMESRHKKGFEACGRNLAVTPDLQFAKEF--------------SGLHQNFQTAAAEGKVVTCLLIQSLIIECFAIAAYNIYIPVA-DDFARKITEGVVKEEYSHLNFGEVWLKEHFAES................................................. 163
35 -29.2003r2h_A mol:protein length:154 Bacterioferritin  ali model follow..  15  2...............QGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRM--------------------------RPDDIHPGTTVPEMLEADLKLERHVRAALAKGIALCKDFVSRDILKALADTEEDHAYWLEQQLGLIARMGLENYLQSQ......................................... 153
36 -28.9004pgi_A mol:protein length:250 Aldehyde decarbonylase  ali model follow..  13  24.........PDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLL-----PDHVEELKRLAKMEMRHKKGFTACGKNLGVKADMDFAREF--------------APLRDNFQTALGQGKTPTCLLIQALLIEAFAISAYHTYIPVS-DPFARKITEGVVKDEYTHLNYGEAWLKANLES.................................................. 175
37 -28.5004kvr_A mol:protein length:244 Aldehyde decarbonylase  ali model follow..  14  15....STVGSSEALPDFTSDRYKDAYSRINAIIEGEQEAHDNYIAIGTLL--PDHVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREF--------------APLRDNFQTALGQGKTPTCLLIQALLIEAFAISAYHTYIPVS-DPFARKITEGVVKDEYTHLNYGEAWLKANLES.................................................. 175
38 -28.4005uwz_A mol:protein length:243 Aldehyde decarbonylase  ali model follow..  13  10............ALDYRSDTYRDAYSRINAILEGEREAHANYLTLAEML--PDHAEALKKLAAMENRHFKGFQSCARNLEVTPDDPFARAY--------------EQLDGNFQQAAAEGDLTTCMVIQALIIECFAIAAYNVYIPVA-DAFARKVTEGVVKDEYTHLNFGQQWLKERFVT.................................................. 162
39 -28.4005n5e_e mol:protein length:99 PFC_05175  ali model follow..  25  9.............................................................................................................LINRDKPYTKEELMEILRLAIIAELDAINLYEQMARYSEDENVRKILLDVAREEKAHVGEFMALLLNLDPE.................................................. 79
40 -28.3002hz8_A mol:protein length:115 De novo designed diiron protein  ali model follow..  12  2...............................................................DELRELLKAEQQAIKIYKE---------------------------VLKKAKEGDEQELARLIQEIVKAEKQAVKVYKEAAEKARNPEKRQVIDKILEDEEKHIEWLKAASKQGNAEQFASLVQQILQDEQRHVEEIEKKN.......................... 115
41 -28.3004quw_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  15  2.....PQLEASLELDFQSESYKDAYSRINAIIEGEQEAFDNYNRLAEML--PDQRDELHKLAKMEQRHMKGFMACGKNLSVTPDMGFAQKF--------------ERLHENFKAAAAEGKVVTCLLIQSLIIECFAIAAYNIYIPVA-DAFARKITEGVVRDEYLHRNFGEEWLKANFDA.................................................. 161
42 -27.8001b71_A mol:protein length:191 PROTEIN (RUBRERYTHRIN)  ali model follow..  11  2.............KSLKGSRTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVA--------------------------AFPAGIIADTHANLIASAAGEHHEYTEMYPSFARIARYEEIARVFASIAVAEEFHEKRFLDFARNIKE................................................... 144
43 -27.7005k53_A mol:protein length:262 aldehyde deformylating oxygenase  ali model follow..  16  41..............ETYKDAYSRINAIVIEG---EQEAHDNYLTLAELL--ADKKAELVGLSKMENRHMKGFQACGRNLKVTPDMAFAKQF--------------SELHKNFQTAAAQGQIVTCLLIQSLIIECFAIAAYNIYIPVA-DDFARKITEGVVKEEYSHLNFGEVWLQAHFEE.................................................. 187
44 -27.5005k52_A mol:protein length:265 Aldehyde decarbonylase  ali model follow..  16  26...FMPQLEATAAIDYQSETYKDAYSRINAVIEGEDEAANNYVRLAELM--PEQSEELASLAKMEARHKKGFTACGKNLNVTPDMDFAKKF--------------SDLHGNFQVAAAAGNIVTCLLIQALIIEAFAISAYNVYIPHA-DDFARKITENVVKDEYLHLNFGEQWLKANFES.................................................. 187
45 -26.4002e0z_A mol:protein length:345 Virus-like particle  ali model follow..  11  1MLSINPTLINRDKPYT-KEELMEILRLAIIA---ELDAINLYEQMARYSEDENVRKILLDVAREEKAHVGEFMALLLNLDPEQVTELKGGFEEV------KELTGIEAHINDNKKEESNVEYFEKLRSALLDGVNKGRSLLKHLPVTRIEGQSFRVDIIKFEDGVRVVKQEYK......................................................... 163
46 -25.4001za0_A mol:protein length:275 POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE)  ali model follow..  8  55..........DPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFI--LEDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANED----------------VRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDY.................................................. 206
47 -24.7003k6c_A mol:protein length:95 Uncharacterized protein NE0167  ali model follow..  16  11.................................................................................................................QELSDETRDMHRAIISLREELEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRCDPA.................................................. 77
48 -24.1005ux2_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  11  9..............AAYREAYSRINGVVIVGEGLANRHFQMLARRI-----PADRDELQRLGRMEGDHASAFVGCGRNLGVVADLPLARR-------------LFQPLHDLFKRHDHDGNRAECLVIQGLIVECFAVAAYRHYLPVA-DAYARPITAAVMNDESEHLDYAETWLQRHFDQ.................................................. 155
49 -23.2005da5_A mol:protein length:116 Rru_A0973  ali model follow..  18  11...............................................................................................................PLEVLKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILAHNRDEEKEHAAMTLEWLRRNDAK.................................................. 79
50 -21.6005n5f_A mol:protein length:98 encapsulated ferritin  ali model follow..  16  12.................................................................................................................ELLSEETKNMHRALVTLIEELEAVDWYQQRADACSEPGLHDVLIHNKNEEVEHAMMTLEWIRRRSPV.................................................. 78
51 -21.3001nnq_A mol:protein length:171 Rubrerythrin  ali model follow..  18  1.............MVVKRTMTKKFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKL----------------------------------------GKTPENLQMGIEGETEVEEMYPVYNKAAEEKEAVRTTHYALEAEKIHAELYRKAKEKAEK................................................... 130
52 -21.2005l8f_A mol:protein length:116 Rru_A0973  ali model follow..  14  13.................................................................................................................EVLKEETVNRHRAIVSVMEALEAVDWYDQRVDASTDPELTAILAHNRDEAKEAAAMTLEWLRRNDAK.................................................. 79
53 -20.9004etr_A mol:protein length:153 Putative uncharacterized protein  ali model follow..  9  9.................LDDTLDVLNDLLQT---SKDGEAGFHACAEDLRDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRR---------------DLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDARA.................................................... 153
54 -20.7002ib0_A mol:protein length:170 CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN  ali model follow..  7  12..........PKRSPSEGSADNAALCDALAVEHATIYGY----GIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAG------------------------QLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGA...................................................... 150
55 -20.5005hjf_A mol:protein length:185 Ferritin, Dps family protein  ali model follow..  8  26..............RSVTAPVTEGFNVVLASFQALYLQYQKHHFVVEGSEFYSLHEFFNESYNQVQDHIHEIGERLDGLGGVPVATFSKLAELTCFEQES----------------EGVYSSRQMVENDLAAEQAIIGVIRRQAAQAEDRGTRYLYEKILLKTEERAYHLSHFLAK...................................................... 174
56 -20.3001moj_A mol:protein length:182 Dps-like ferritin  ali model follow..  10  24..............ADRAEQCVDALNADLANVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVED----------------EDVYDIRTSLANDMAIYGDIIEATREHTELAEDHATAHMLREGLIELEDDAHHIEHYLED...................................................... 172
57 -20.3002d5k_A mol:protein length:156 Dps family protein  ali model follow..  12  1.............MASNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIV-----------------KEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGDDVSEDMFIGMQTSVDKHNWMFKSYLSL...................................................... 149
58 -20.0001jig_A mol:protein length:146 Dlp-2  ali model follow..  10  1...............STKTNVVEVLNKQVANWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSV-----------------NEGTSKESAEEMVQTLVNDYSALIQELKEGMEVAGDATSADMLLAIHTTLEQHVWMLSAFLK....................................................... 146
59 -19.9001mft_A mol:protein length:53 Four-helix bundle model  ali model follow..  21  1..........................................................................................................................MDYLRELYKLEQQAMKLYREASEKARNPEKKSVLQKILEDEEKHIEWLETIN........................................................ 52
60 -19.9003hl1_A mol:protein length:317 Ferritin like protein  ali model follow..  11  9..................PRLYQHFQGAID---LELWTIPYYLTVLYSIKDTVPYRLIQAAVYQEMLHAQLVSNIANAYGYSPTLSAPEYVGTAVPHIDFDLDTPNPTSIFTPYSAELGPLDLTRVNTMCLIEYPE-EFYDALRVGMEQLQALTLVDIIVDQAWPHFQRFDFIRRMPN.................................................... 245
61 -19.3002vxx_A mol:protein length:192 STARVATION INDUCED DNA BINDING PROTEIN  ali model follow..  8  23..............KATTTPICEGMNRLLASFQALYLQYQKHHFVVEGAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALCCF----------------TPEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATQAEDRATAYLYDQILLKTEERAYHIGHFLAN...................................................... 171
62 -19.2004mud_A mol:protein length:235 Ring oxydation complex/ phenylacetic acid degradation related protein  ali model follow..  11  12................PQDLTNTLVNIIELRADFELAMVEQYSPWLVNAPTVDSRLFVAKLVSDELNHGWQLVRLLEEFKVKDV--------------IERISNARLGIHKLEVSNLPLFNWEDVIAFTFLVDGAGLYQLKILKDCSFEP-LSTLASSMIKEEESHIFFSQNELRNYQNK.................................................. 160
63 -19.0005xgo_A mol:protein length:200 DNA protection during starvation protein,Bacterioferritin  ali model follow..  12  31..............DSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYP----------------LDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIECNLDLIQKMGLQNYLQAQIREE..................................... 193
64 -18.7003qz3_A mol:protein length:184 Ferritin  ali model follow..  15  12.................SQAMVEHLNEQINLEFFSSNLYLQMSAWCEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAPRHD-------------------------ASLGEVFRETYQHEQKITQQINKLAHVAQDYSTFNFLQWYVAEQHEEEKLFKGILDKLELVGE................................................ 155
65 -18.6002xgw_A mol:protein length:199 PEROXIDE RESISTANCE PROTEIN  ali model follow..  11  38..............ASKNEKTKAVLNQAVADLSVAASIVHQVHWYMRGPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKH---------------SKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGLDITDDAGTNDLFTAAKTEAEKTIWMLQAERGQ...................................................... 187
66 -18.5001n1q_A mol:protein length:149 DPS Protein  ali model follow..  10  3..............TSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEEASI-----------------KEATGGESAAEMVSSVVNDFVDLVGELKVARDVADDEATADMLDAIEAGLEKHVWMLEAFLE....................................................... 149
67 -18.3002cf7_A mol:protein length:165 DPR  ali model follow..  9  12..............RPSLADSKAVLNQAVADLSVAHSILHQVHWYMRGRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKEVLG---------------DYNVTIEEQLARVVEVFRYLAALFQKGFDVSDDSVTNDIFNVAKASIEKHIWMLQAELGQAPK................................................... 164
68 -18.3003oj5_A mol:protein length:189 Ferritin family protein  ali model follow..  12  8.................KTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQ-------------------------DRPREALALALDQERTVTDQVGRLTAVAGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAG................................................. 150
69 -17.8005uxg_A mol:protein length:220 aldehyde deformylating oxygenase  ali model follow..  9  10..............QEIREGIKYLSAHFYPA---SIMDRWKILKKLSFEKAKIIANYSLQQVIEEIEHFDFFNEYFKEDPLTTVRLPPSYIKLF--------------DGLVEDFQSSRWRENIATRFHMITETVGLKILNETSRKYNLLKFNEGIKRIIEDEARHVSFGLSLIEDKEYA.................................................. 162
70 -17.6002c41_A mol:protein length:158 DPS FAMILY DNA-BINDING STRESS RESPONSE PROTEIN  ali model follow..  10  5..............TTLKEQVLTTLKREQANAVVMYLNYKKYHWLTYGPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATV-----------------TPSSGQLTVKQMIEEAIANHELIITEMHQDAEIATDIGTADLYTRLVQTHQKHRWFLKEFLAK...................................................... 152
71 -17.4005u1b_A mol:protein length:189 MtrE protein,Ferritin chimera  ali model follow..  15  25.................SKDIIKLLNEQVN---KEMNSSNLYMSMSSWCYTHSLGLFLFDHAAEEYEHAKKLIVFLNENNVPVQLTSISAPE------------------------HKFEGLTQIFQKAYEHEQESINNIVDHAIKSKDHATFNFLQWYVSEQHEEEVLFKDILDKIELIGN................................................ 168
72 -17.4001ji5_A mol:protein length:142 Dlp-1  ali model follow..  11  1...................QVIEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSI-----------------QEAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQDEMTSDLLLGIYTELEKHAWMLRAFLN....................................................... 142
73 -17.3004cmy_A mol:protein length:203 FERRITIN  ali model follow..  15  3.................SKTILDKLNHQVN---FEAASAHLYLQMSAWLLTQSLAAFFRAHAEEEKAHMMKLFDYINETGSLALIGEVATPA------------------------PEWKSHIELLEAAYNHELQSINDLVDTALREKDYSTFQFLQWYVAEQHEEEYLFSSMLHKARIINT................................................ 146
74 -17.2001mhy_D mol:protein length:521 METHANE MONOOXYGENASE HYDROXYLASE  ali model follow..  14  88..............NKVHPRWGETMKVISNFEVGEYNAIAASAMLWDSATAAEQKNGYLAQVLDEIRHTHQCAFINHYYSKHYHDPAGHNDARRT----AIGPLWKGMKRVFADGFISGDAVECSVNLQLVGEACFTNPVTEWASANGDEITPTVFLSVETDELRHMANGYQTVVSIANDPA................................................ 257
75 -17.2002c2f_A mol:protein length:207 DNA-BINDING STRESS RESPONSE PROTEIN  ali model follow..  9  55..............EKEFQTVAETLQRNLATTISLYLKFKKYHWDIRGRFFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYSTVQVPQ----------------ETVRDARTQVADLVQDLSRVGKGYRDDSQACDDPVTADMYNGYAATIDKIRWMLQAIMDD...................................................... 203
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.