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Query: 4wz3_B mol:protein length:215 E3 ubiquitin-protein ligase LubX, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MATRNPFDIDHKSKYLREAALEANLSHPETTPTMLTCPIDSGFLKDPVITPEGFVYNKSSILKWLETKKEDPQSRKPLTAKDLQPFPELLIIVNRFVETQTNYEKLKNRLVQNARVAARQKEYTEIPDIFLCPISKTLIKTPVITAQGKVYDQEALSNFLIATGNKDETGKKLSIDDVVVFDELYQQIKVYNFYRKREVQKNQIQPSVSNGFGFFLast
1 -109.0004wz3_B mol:protein length:215 E3 ubiquitin-protein ligase LubX  ali model  100  1MATRNPFDIDHKSKYLREAALEANLSHPETTPTMLTCPIDSGFLKDPVITPEGFVYNKSSILKWLETKKEDPQSRKPLTAKDLQPFPELLIIVNRFVETQTNYEKLKNRLVQNARVAARQKEYTEIPDIFLCPISKTLIKTPVITAQGKVYDQEALSNFLIATGNKDETGKKLSIDDVVVFDELYQQIKVYNFYRKREVQKNQIQPSVSNGFGFF 215
2 -46.7002f42_A mol:protein length:179 STIP1 homology and U-box containing protein 1  ali model follow..  17  67.........................................................................................SQNGGDISKMKSKHDKYLMDMDELFSQVDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQENG................... 174
3 -44.0001t1h_A mol:protein length:78 armadillo repeat containing protein  ali model follow..  24  1.........................................................................................................................GSPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIE................. 78
4 -42.7002oxq_C mol:protein length:80 STIP1 homology and U-Box containing protein 1  ali model follow..  24  2.....................................................................................................................AMGSKKREIPDYLCGKISFELMAEPCITPSGITYDRKDIEEHLRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQEN.................... 80
5 -41.8002kr4_A mol:protein length:85 Ubiquitin conjugation factor E4 B  ali model follow..  21  2....................................................................................................................GSAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREKQSSDH............... 85
6 -41.4002kre_A mol:protein length:100 Ubiquitin conjugation factor E4 B  ali model follow..  20  15..................................................................................................................KNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH............... 100
7 -41.0005o75_A mol:protein length:78 Ubiquitin conjugation factor E4 B  ali model follow..  21  3............................................................................................................................DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNS................. 76
8 -39.6001wgm_A mol:protein length:98 Ubiquitin conjugation factor E4A  ali model follow..  20  6................................................................................................................SGLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQSGPSS............ 97
9 -36.8005m88_A mol:protein length:136 Core  ali model follow..  13  1.................................................................................................................................MLCALSGEIPEEPVVSKTGVLFEKRLILKYLEHNNIEPGTTEELDPETDLLPIKTSRVVRPRPPNFTS.................. 70
10 -31.6002qiz_A mol:protein length:982 Ubiquitin conjugation factor E4  ali model follow..  20  820...............................PKDLLKALTTVYIN--AVAKDERSFNRNLFVR----------AVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEE---------EDLEYGDVPDEFLDPLMYTIMKDPVILASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQKKEEAKHKASE.......... 982
11 -31.3002bay_A mol:protein length:61 Pre-mRNA splicing factor PRP19  ali model follow..  27  2...............................................................................................................................SHMLCAISGKVPRRPVLSKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPSAQ............................. 61
12 -30.2002yu4_A mol:protein length:94 E3 SUMO-protein ligase NSE2  ali model follow..  20  2...........................................................................................................................SSGSSGFTCPITKEEMKKPVKNKVGHTYEEDAIVRMIESRQYCPQIHTDIRKSDLIQDEALRRAIENHNKKRHRHSESGPSS.......... 93
13 -29.9002kkx_A mol:protein length:102 Uncharacterized protein ECs2156  ali model follow..  10  1.......SQESIQNKISQCKFSVCPERLQCPLEAIQCPITLEQPEKGIFVKNSTLFDAAAFSRLVGEGLPHPLTREPITASIIVKHEEC.............................................................................................................................. 88
14 -24.3001jm7_A mol:protein length:112 BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN  ali model follow..  25  3...............LSALRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKQCPLCKNDITKRSLQESTRFSQLVEELLK..................................................................................................................... 88
15 -23.4005h7r_D mol:protein length:128 E3 ubiquitin-protein ligase LNX  ali model follow..  24  5..........AVCGQAHSLEENHFYSYPEEVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKPLVLQHCKKSILVNKLLNKL....................................................................................................................... 91
16 -23.2005olm_A mol:protein length:132 E3 ubiquitin-protein ligase TRIM21  ali model follow..  16  1..................GSHMASAARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQGKGGGSVCPVCRQRFLLKNLRPNRQLANMVNNLKEISQEAREGTQGERCAVHGERLH-EKDGKALCWVCAQSRKHRDHAMVPLE.................................................................... 132
17 -22.6003lrq_A mol:protein length:100 E3 ubiquitin-protein ligase TRIM37  ali model follow..  17  2...................GSHMDEQSVESIAEVFRCFICMEKLRDARLCPHSKLCCFSCIRRWLTEQRQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCSLTKHEE.......................................................................................................... 93
18 -22.6002csy_A mol:protein length:81 Zinc finger protein 183-like 1  ali model follow..  11  1...................GSSGSSGGSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTGGIFNPAKELMAKLQKSGPSS.................................................................................................................... 80
19 -22.5005din_A mol:protein length:130 Ligand of Numb protein X 2  ali model follow..  17  1....EFNPLCFECGQQHWTRENHLYNYQNEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKL.......................................................................................................................... 89
20 -22.4002ecw_A mol:protein length:85 Tripartite motif-containing protein 30  ali model follow..  24  2................SSGSSGMASSVLEMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNCPVCRVPYPFGNLKPNLHVANIVE......................................................................................................................... 85
21 -22.3002d8t_A mol:protein length:71 RING finger protein 146  ali model follow..  15  1...................GSSGSSGNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLDS.................................................................................................................................. 66
22 -22.1004ayc_A mol:protein length:138 E3 UBIQUITIN-PROTEIN LIGASE RNF8  ali model follow..  18  21.KNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSKT--YSLVLDNCINKMVNNLSSEVKERRIVLIRERKAKR................................................................................................ 136
23 -22.1004tkp_B mol:protein length:93 Tripartite motif-containing protein 5  ali model follow..  20  9.............................NVKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMSCPVCRISYQPENIQPNRHVANIVEKLREVKLSPEEGQ............................................................................................................ 93
24 -22.0002ecv_A mol:protein length:85 Tripartite motif-containing protein 5  ali model follow..  15  2................SSGSSGMASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMSCPVCRISYQPENIRPNRHVANIVE......................................................................................................................... 85
25 -21.8002y43_A mol:protein length:99 E3 UBIQUITIN-PROTEIN LIGASE RAD18  ali model follow..  20  18.............................TIDDLLRCGICFEYFNIAMIIPQSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDELVKSLNFARNHLLQFALES......................................................................................................... 99
26 -21.8002egp_A mol:protein length:79 Tripartite motif-containing protein 34  ali model follow..  19  1......................GSSGSSGNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVSCPVCGISYSFEHLQANQHLANIVE......................................................................................................................... 79
27 -21.7002eci_A mol:protein length:86 TNF receptor-associated factor 6  ali model follow..  19  1.........GSSGSSGMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGKCPVDNEILLENQLFPDNFAKREI.......................................................................................................................... 85
28 -21.4002jmd_A mol:protein length:63 TNF receptor-associated factor 6  ali model follow..  24  2.............................PLGSKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGKCPVDNEILLENQLFPDNFAK............................................................................................................................. 63
29 -21.3005dka_A mol:protein length:232 E3 ubiquitin-protein ligase RNF125  ali model follow..  20  1MGSVLSTDSGKSAPASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKTCPYCRAYLPSEGVPATDVAKRMKSEYKN..................................................................................................................... 99
30 -21.2004orh_C mol:protein length:149 E3 ubiquitin-protein ligase RNF8  ali model follow..  18  32.KNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSKT--YSLVLDNCINKMVNNLSSEVKERRIVLIRERKAKR................................................................................................ 147
31 -21.2004ap4_A mol:protein length:133 E3 UBIQUITIN LIGASE RNF4  ali model follow..  18  6................................GTVSCPICMDGYSEIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGYSEIVQNG------------------------------RLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY................................. 132
32 -21.1005vnz_A mol:protein length:118 TNF receptor-associated factor 6  ali model follow..  18  15.............................PLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGKCPVDNEVLLEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQ-----------CRFALE.............................................................................. 112
33 -20.9003hct_A mol:protein length:118 TNF receptor-associated factor 6  ali model follow..  22  14.............................PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGKCPVDNEILLENQLFPDNFAKREILSL....................................................................................................................... 81
34 -20.5003jb9_S mol:protein length:488 Pre-mRNA-processing factor 19  ali model follow..  17  1..................................MFCSISGETPKEPVISRSGNVYEKRLIEQVIRETSKDPVTQQECTLEDLVPATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKERDEAREALAKFSDNIGTVSSKTIEVQEVEMGESDDQLKT--SLRSTVEKTFQELSSKRKRTKLQPKWATDDA.. 191
35 -20.5004gb0_A mol:protein length:121 E3 ubiquitin-protein ligase RNF168  ali model follow..  15  2..................GGSMALPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASCCPFCRRRVSRRNSLVNVELWTIIQKHYPRECKLRASGQE.......................................................................................................... 100
36 -20.4003ztg_A mol:protein length:92 E3 UBIQUITIN-PROTEIN LIGASE RBBP6  ali model follow..  22  4........................GSEDDPIPDELLCLICKDIMTDAVVIPCGNSYCDECIRTALLESDTCPTCHQNVSPDALIANKFLRQAVNNFKNETGYTKRLRKQ.......................................................................................................... 92
37 -20.0003l11_A mol:protein length:115 E3 ubiquitin-protein ligase RNF168  ali model follow..  15  1...................GSMALPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASCCPFCRRRVSRRNSLVNVELWTIIQKHYPRECKLRASGQE.......................................................................................................... 98
38 -19.8005gm6_o mol:protein length:503 Pre-mRNA-processing factor 19  ali model follow..  12  1..................................MLCAISGKVPRRPVLSPSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVE----------------------IVPSAQQASLTESTNSATLKANYSIPNLLTSLQNE----DAIMLENFKLRSTLDS------LTKKLSTVMYERDAAKLVAAQLLMEKNEDSKDLPKSSQQAVAI.... 147
39 -19.7002ecy_A mol:protein length:66 TNF receptor-associated factor 3  ali model follow..  14  11.............................TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSKCTACQESIVKDKV.................................................................................................................................... 65
40 -19.5005eya_F mol:protein length:86 Tripartite motif-containing 25 variant  ali model follow..  21  1.....................GSHMAELCPLAEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGLCPQCRAVYQARQLHKNTVLCNVVEQFLQADLAR................................................................................................................ 86
41 -19.5005fer_A mol:protein length:85 E3 ubiquitin/ISG15 ligase TRIM25  ali model follow..  22  1.....................GPGMAELCPLAEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGLCPQCRAVYQARQLHKNTVLCNVVEQFLQAD................................................................................................................... 83
42 -19.4003fl2_A mol:protein length:124 E3 ubiquitin-protein ligase UHRF1  ali model follow..  13  20.SNAKLWNEVLASLKDRPASGSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVSCPACRYDLGRSAMQVNQPLQTVLNQLFPGY................................................................................................................... 120
43 -19.2001z6u_A mol:protein length:150 Np95-like ring finger protein isoform b  ali model follow..  13  43....REDCQNQKLWDEVLSHLVEGPNFLKKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVSCPACRHDLGQNIMIPNEILQTLLDLFFPGYSK................................................................................................................. 142
44 -19.1002ysl_A mol:protein length:73 Tripartite motif-containing protein 31  ali model follow..  17  2...............SSGSSGMASGQFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCKCPLCKTSVRKNAI.................................................................................................................................... 72
45 -19.0002c2l_A mol:protein length:281 CARBOXY TERMINUS OF HSP70-INTERACTING PROTEIN  ali model follow..  18  177.................................................................................................CIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGFNPVTRSPLTQEQLIPNLAMKEVIDAFISENG................... 276
46 -18.8001jm7_B mol:protein length:117 BRCA1-ASSOCIATED RING DOMAIN PROTEIN 1  ali model follow..  10  10.....................AHSRAALDRLEKLLRCSRCTNILREPVCLGGEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRNLLHDNELSDLKEDKPRKS................................................................................................ 106
47 -18.7004qpl_A mol:protein length:155 E3 ubiquitin-protein ligase RNF146  ali model follow..  16  4................................TVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRG................................................................................................................... 71
48 -18.6002ldr_A mol:protein length:82 E3 ubiquitin-protein ligase CBL-B  ali model follow..  21  2.........PHMGSDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTAWQESDQGCPFCRCEIKGTEPII.................................................................................................................................. 78
49 -18.6003knv_A mol:protein length:141 TNF receptor-associated factor 2  ali model follow..  9  1MAAASVTPPGSLELLQPGFSKTLLGTK---LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPNCAACVHEGIYEEGISILESSSAFPDNAARRE.................................................................................................................. 99
50 -18.5002k4d_A mol:protein length:83 E3 ubiquitin-protein ligase CBL  ali model follow..  20  2...........SLQDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEQGCPFCRCEIKGTEPIV.................................................................................................................................. 76
51 -18.4004a49_A mol:protein length:84 E3 UBIQUITIN-PROTEIN LIGASE CBL  ali model follow..  19  1.......GSEPTPQDHIKVTQEQFELYCEMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEQGCPFCRCEIKGTEPIV.................................................................................................................................. 79
52 -18.4004ppe_A mol:protein length:76 E3 ubiquitin-protein ligase RNF4  ali model follow..  19  1...................GPLGSGATGLRPSGTVSCPICMDGYSEIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHP.................................................................................................................................. 73
53 -18.1002ma6_A mol:protein length:61 E3 ubiquitin-protein ligase RNF123  ali model follow..  20  1..........................SHMPTSEEDLCPICYAHPISAVFQPCGHKSCKACINQHLMNNKDCFFCKTTIVSV...................................................................................................................................... 55
54 -17.8003ng2_A mol:protein length:71 RING finger protein 4  ali model follow..  21  1........................GTTGLRPSGTVSCPICMDGYSEIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHP.................................................................................................................................. 68
55 -17.5005mqf_G mol:protein length:504 Pre-mRNA-processing factor 19  ali model follow..  26  2.................................SLICSISNEVPEHPCVSPSNHVYERRLIEKYIAENGTDPINNQPLSEEQLID.................................................................................................................................. 54
56 -17.4004s3o_C mol:protein length:117 Polycomb group RING finger protein 5  ali model follow..  17  11.............................DFNPYITCYICKGYLIKPTTVTELHTFCKTCIVQHFEDSNDCPRCGNQVHEEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNKPQENGQDLE.......................................................................................... 111
57 -17.4005vo0_A mol:protein length:172 TNF receptor-associated factor 6  ali model follow..  15  15.............................PLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGKCPVDNEVLLEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAP----CP--------------QESVPMSHLDEHKSQH-TCPDCAGSFSHEQFCPFANLE.............................. 166
58 -17.3002xeu_A mol:protein length:64 RING FINGER PROTEIN 4  ali model follow..  26  2................................AMVSCPICMDGYSEIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHP.................................................................................................................................. 61
59 -17.3002yur_A mol:protein length:74 Retinoblastoma-binding protein 6  ali model follow..  18  1...................GSSGSSGEDDPIPDELLCLICKDIMTDAVVIPCGNSYCDECIRTALLESDTCPTCHQNVSPDALSGPSS............................................................................................................................... 73
60 -17.3002djb_A mol:protein length:72 Polycomb group RING finger protein 6  ali model follow..  15  1...................GSSGSSGNLSELTPYILCSICKGYLIDATTITELHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSGPSS.............................................................................................................................. 71
61 -17.2003hcs_A mol:protein length:170 TNF receptor-associated factor 6  ali model follow..  15  14.............................PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMD----CP--------------QRPFQKFHINIHILKD-SCDNCAASMAFEDKEIHDQ................................ 157
62 -17.2004r8p_K mol:protein length:110 Polycomb complex protein BMI-1  ali model follow..  19  1..................GSHRTTRIKITELNPHLMCVLCGGYFIDATTIIELHSFCKTCIVRYLETSKYCPICDVQVHKLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAAN............................................................................................. 109
63 -17.1002ckl_B mol:protein length:165 UBIQUITIN LIGASE PROTEIN RING2  ali model follow..  19  22.TWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKELHRFCADCIITALRSGNECPTCRKKLSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQA............................................................................................. 145
64 -16.8003rpg_B mol:protein length:117 Polycomb complex protein BMI-1  ali model follow..  21  11.............................ELNPHLMCVLCGGYFIDATTIIELHSFCKTCIVRYLETSKYCPICDVQVHKLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGLE.......................................................................................... 111
65 -16.6005z56_M mol:protein length:343 RING finger protein 113A  ali model follow..  13  231.....QIERELDEGRYGVYEDENYEVGSDDEEIPFKCFICRQSFQNPVVTKCRHYFCESCALQHFRTTPRCYVCDQQTNGV----FNPAKELIAKLEKHRA-------------TGEGGASDLPEDPDEDAIPIT................................................................................ 343
66 -16.5005trb_A mol:protein length:75 E3 ubiquitin-protein ligase BRE1A  ali model follow..  20  2................PLGSDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTQRKCPKCNAAFGANDFHR.................................................................................................................................. 71
67 -16.2003htk_C mol:protein length:267 E3 SUMO-protein ligase MMS21  ali model follow..  18  181.................................ELTCPITCKPYEAPLISRKNHVFDRDGIQNYLQGYTTCPQASQVVSMRDFVRDPIMELRCKIAKMKESQEQDKRS........................................................................................................... 260
68 -16.0002ea6_A mol:protein length:69 RING finger protein 4  ali model follow..  19  2....................SSGSSGTGLRPSGTVSCPICMDGYSEIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK...................................................................................................................................... 69
69 -15.7002cs3_A mol:protein length:93 Protein C14orf4  ali model follow..  10  1...................GSSGSSGSPMANSGPLCCTICHERLEDTHFVQPSHKFCFPCSRESIKAQGYCPSGEKCPLVGSNVPWAFMQGEIATILSGPSS................................................................................................................. 92
70 -15.7004b7y_C mol:protein length:116 MALE-SPECIFIC LETHAL 2 HOMOLOG  ali model follow..  17  37.............................YFRQSLSCCVCGHLLQDPINSTCQHYVCKTCKGKKMMMKPSCSWCK---DYEQFEENKQLSILVNCYKK..................................................................................................................... 105
71 -15.6005gm6_a mol:protein length:259 Pre-mRNA-splicing factor CWC24  ali model follow..  13  175............NQEWNADKEDSKAVTLDLEKIPFKCTLCKEDYKSPVVTNCGHYFCGSCFAKDMKKGTKCFICHKETHGS-AKVASDLQKMLNK........................................................................................................................ 256
72 -15.6004r7e_A mol:protein length:69 E3 ubiquitin-protein ligase BRE1  ali model follow..  21  1....................DEALVEELANFRTLVYCSLCSKNWKNMAIKTCGHVFCENCCKERLARMRKCPTCNKAFSSNDLLT.................................................................................................................................. 66
73 -15.3002ecj_A mol:protein length:58 Tripartite motif-containing protein 39  ali model follow..  24  1...................GSSGSSGALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLEPCPV.............................................................................................................................................. 57
74 -14.2002m1s_A mol:protein length:99 RING finger protein Z  ali model follow..  12  1MGNKQAKAPESKDSPRASLIPDATHLGPQF------CKSCWF--NKGLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRPS.................................................................................................................................. 78
75 -13.8002ecn_A mol:protein length:70 RING finger protein 141  ali model follow..  16  2....................SSGSSGRVKQLTDEEECCICMD--RADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGAN..................................................................................................................................... 62
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.