current user: public
If you have questions about the server, please let us know.

Query: 4xab_A mol:protein length:252 EvdO2, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250
# Score Template Links and tools%idFirst MDAMEVVGTIDHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKYVPELLDSPHFARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHQDEAYMDPRWRRRGLSIWTTLDEATVESGCLHYLPGGHRGPVLPHHHIDNDDRIRGLMTDDVDPTSAVACPLAPGGAVVHDFRTPHYAGPNLTDQPRRAYVLVFMSAPAEVADPEPRPWMDWGLast
1 -116.0004xab_A mol:protein length:252 EvdO2  ali model  100  1MDAMEVVGTIDHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKYVPELLDSPHFARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHQDEAYMDPRWRRRGLSIWTTLDEATVESGCLHYLPGGHRGPVLPHHHIDNDDRIRGLMTDDVDPTSAVACPLAPGGAVVHDFRTPHYAGPNLTDQPRRAYVLVFMSAPAEVADPEPRPWMDWG 252
2 -94.4004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  26  1...MTTATLDRAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDAPERDLLHREELAQLAAAFV--DGPVVPTAYALVLKEPYRAAEVPWHRDRVNV---GPRTVCNLSICLDDAGPHNGCLEAVPGSHLLPDDAE------------VAKVRATGPVVPVPVSQGDVVVHDVRLVHGSGPNANGSWRRTIVIEYADPAAPPA........... 222
3 -92.1002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  20  1......MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLG--LQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPEN....... 276
4 -90.8005epa_A mol:protein length:279 SnoK  ali model follow..  21  9PGGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEKEGREIWG---------AGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLA--GAPLRVYSSDILVKEPKRTLPTLVHDDETGLPLNELSATLTAWIALTDVPVERGCMSYVPGSHLRAREDRQEHMTSFAEFRDVWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDADATYRPGVQDGHLSPG 255
5 -90.5002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  17  14FQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFT--GPNIMAMHTMLINKPPDSGKKTSRHPLHQYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTS..... 266
6 -87.6005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  21  18..PAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEESV----------RWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLA--GSPLRLFKLEVLLKENDASVPTAPHHDAFAFPFSTAGTALTAWVALVDVPVERGCMTFVPGSHLLPDPDTGDEPWAGAF---TRPGEIWMPRVTVPLRAGDCTFHHARTVHSAGANSTDEPRLSTSAVYMDATAAYRPTGIA...... 249
7 -87.5005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  17  3......RMQLTADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQEVQGPHRIL----------EEDGRTVRALYASHTRQSVFDQLSRSDRLLGPATQLL--ECDLYIHQFKINTKRAFGGDSWAWHQDFIVWRDTDAPRAVNVGVFLSDVTEFNGPVVFLSGSHQRGTVERKARETSRSDQHVDPDDVEKHPMVSPKAASGSVMLFHPEIIHGSAPNISPFARDLLIITYNDVANAPKAGEPRPEYVIG 251
8 -87.1002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  14  2.SHMSKKFALTAEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQD-------LDAISGGTNIANYDRHLDDDFLASHICRPEICDRVESIL--GPNVLCWRTEFFPKYPG-DEGTDWHQADTFAN-EEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDETKRMTYEPDANDENWKPDEASAVPMQMKAGQFIIFWSTLMHASYPHESQEMRMGFASRYVPSFVHVYPDSDHAVQVIG 291
9 -87.0004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  21  27.SEWTNDAPISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIV------TEPQSNEIRSIFEIHAQSPVMARLAADARLADVARFLL--GDEVYIHQSRLNYKPGFKGREFYWHSDFETWHVEDRMRALSMSVLLAENTPHNGPLMVIPGSHRTYLTCVGETPDDHYLSSLLAELAHRHGIVAPTGKPGTVILFDCNLMHGSNGNITPFPRANAFLVYNAVSNRLEKPFGVEFLARR 289
10 -86.7003emr_A mol:protein length:310 EctD  ali model follow..  16  27.RSKDNQAPITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVI------REPESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLL--GSDVYVHQSRINYKPGFKGKEFDWHSDFETWHVEDRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPDNNYKESLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSVKNRLVEPFSGG..... 280
11 -85.4003gja_A mol:protein length:319 CytC3  ali model follow..  14  1MTTVSANFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYP----------DSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGSLI--GRNLLCWRSEFFPKYQG-DEGTDWHQAATFAHATAFIGTITVWTAFTHSTEQNGCLQLMPGTHTSMNYDESKGMDYDADAKDPDWKPDESQAYPMVLKPGEAVIFWSNTMHASLPHTGSKTRMGFAARYVPTQVQVYPGTEGAVLTSG 293
12 -80.5004xbz_A mol:protein length:334 EvdO1  ali model follow..  16  30.ECDIRRTGLLPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAWSTRSMED-TVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGHPLLLRIMEQLV--GPNLIPTWDSMVFKTPAGAPRLAWHRDAGLYD-TGAGRVIDAGIYLDPAP-EDNCVWCIPESNYWGDDRLTATADQ-----LNASEWDTTGAVPAVMQPGDLLLHNILTLHGAPAVVGKQ-RRVIYFEYRPAEVEWQLGPHSA..... 269
13 -78.4002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  15  11YTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMREGLVALGAADPH-----ATLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVF--GEPVFVFLSTTISEEPSFHYLTPFHQDGFYIG--PNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVTEVSEDEHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLSMDTRVQPAKSHRGFNAMTPWTESA 269
14 -72.4003nnf_A mol:protein length:344 CurA  ali model follow..  13  14FQSNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKV------TLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYIT--GKNLMIMHNALFSVEPN-HKGLPWHVGVGSFSFTKTEDGASIWIPLDKITKEHGGMQYVSTKIFPGQFYYSVFDLHNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPHKLRRAFVIRLVDYDTRVDEER........ 277
15 -72.1006EC3 Entity 1(prereleased)  ali follow..  25  239CDIVVVGRARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISRFTEHGHVSD-DYWNYDVENEAPVLYRIHNLEKQDWAERELLFRPELAELAAAFV--GSPVVPTAFALVLKEPKRAAGVPWHRDRANV---APHTVCNLSICLDTAGPENGCLEGVPGSHLLPDDID------------VPEIRDGGPRVPVPSKVGDVIVHDVRLVHGSGPNPSDQWRRTIVIEFANPAISLPSLPS....... 465
16 -68.6004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  12  1...LHMVPALTREQLYIFDTTGFLVIPGVFGSGEVESFRSELERLDTV-----------------DPGFPRTRRYPDLPAASPVFARLALDDRLLAPVRDVV--NQPLRLLEGYGLRRTKDSLGDRQVGRDLSITHTYHDGKVKALVYLSDIQSPEDGSFCYVQGSHKANFPLLRERAERGE--NTSLVDSGFPTLSDVFVRSGDVLLLNEALMHGTRRKLTEGDRLLTAFGYGPTFFTEWRELDAE..... 241
17 -61.8005ybm_A mol:protein length:314 PrhA  ali model follow..  13  19LQRFP-ATASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEKIPVEVTN---------NGNSNDRTKRFSKCVIASPTFRNIIESDLMHELCDRVFSGEGMGYHFNDNMVIEVQPGAPAQRLHRDQELYPPAGPECVINFFCAVTPFTEENGATRLVPGSHLWPEFTQINERDC--------PQFGKIETVPAIMQPGDCYLMSGKVIHGAGHNATTDRRRALALAIIRRELRPMQA......... 253
18 -59.7005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  14  24......ATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTN---------DGNSNDRVKRFSKLVTTSPTFRHILENDLMHELLQRVFSEGMGYHFNDTMVIEVQPG-APAQRLHRDQELYPPDAPECLVNFFCAVTPFTVENGATRLVPGSNRWPELTLINATDC--------PQYGKIDSVPAIMQPGDCYMMSGKVIHGAGHNATSDQRRALAFSTIRRELRPVQA......... 253
19 -59.6004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  12  21.....SIQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLADDHVARVHNLVDFSHCFRHEILNHELLHKICRLTFEESGDYWLGYGAVIENGPGTTEQKWHRDQPRYPLVKEGPMLNFFTALTDFDAETGKTQYILGSNKRVELGEPD---------------ADHPIEYVGLKPGDTTIVSGKITHRGSDNRSDKMRRAMPIMIIPSILTPFD.......... 250
20 -54.1005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  12  18IRRVNASQGS-DAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKG----EQTHIINMHNRTIHMGDLVLTSKTYRDLLNLPFAHEVLEKVFKKDSGDYWLNMGNILNMLPGAEAQRPHRDDYLYPVSQHMDMINITFPLNEFRHDNGGTLLLPKSHTGPNADFYA---------------NAEDLPAAEMQVGDALIFTGKCVHGGGANRSDKPRIGLALAAQPGYLTPRES......... 248
21 -54.0004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  19  12LQRLAADADV-DRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERL-------LADKYPPHFKYVPNVATTCPTFRNVLINPVIHAICEAYF--QRTGDYWLSAAFLREIESGMPAPFHRDDATHPLMAPPVSLSVIFPLTEFTEENGATEVILGSHRWTEVGTP----------------ERDQAVLATMDPGDVLIVRQRVVHAGGGNRTGKPRRVVLAYFNSVQLTPFET......... 238
22 -53.6005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  14  12LRRIPRSAGD-EAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKS--------YQESYLAGMRQLSSLPLFSKLFRDLMNDELLHGLCKRLFGPESGDYWLTTSSVLETEPGYHGQELHREHDGIPICSPESMLNFLTALTDFTAENGATRVLPGSHLWEDFS--------------APPPKADTAIPAVMNPGDAVLFTGKTLHGAGKNNTDFLRRGFPLIMQSCQFTPVEA......... 239
23 -50.4005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  15  12IPRLSAINDL-HKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKT----KDHPNHVLSTTTRLVNVLAPISKAYREDVLNSKVLHICSDAFHVYGDYWVLMGAVMELAPS-NPAQPLHRDMRFSHPIAPATSINFLVALSPFTAENGATHVILGSHKWQ----------------NLSNVSMDATVRALMNPGDALLITDSTIHCGGAETTTETRRLLTITMGISQLTPLES......... 241
24 -32.8004rgk_A mol:protein length:418 Uncharacterized protein  ali model follow..  9  68.....INGKVTEEQKAQIKQRGCCAILGVFPQEKATAWNREIGDYLDRNNFVERLKNAAEDNYFGTLAASKPQIYGIYW--STPQVEARQDKRMQAVQIFLNNL-NRVVTYADRTRRRPPKSSSGLSPHVDGG--AVCSMFRTFQGWTALTPQRTHAGTLNVIPIANADDDLCGAAPGRALSASEQWHPLLMEAISPIPDLEAGDTVFWHCDVIHSVENHNGEFDSNVMYIAAAPWC............... 365
25 -32.1002csg_A mol:protein length:424 putative cytoplasmic protein  ali model follow..  13  73.....AMGNISDATRAEVKRRGCAVIKGHFPREQALAWDQSMLDYLDKNHFDEVYKGPGDNFFGTSASRPEIYPVYW----SQAQMQARQSEEMALAQSFLNRL-DISIIYPDRIRRRPPGTGALERWQYDP---TKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAEDELCGVAPGRVLPISEQWHPLLMAALTSIPPLEAGDSVWWHCDVIHSVAPENQQGWGNVMYIPAAPMC............... 371
26 -31.2002dbi_A mol:protein length:461 Hypothetical protein ybiU  ali model follow..  13  110.....KAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTSASRPEIYPIYW----SQAQMQARQSEEMANAQSFLNRL-DVSVIYPDRIRRRPPGTGALERWQYDP---TKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPENQQGWGNVMYIPAAPMC............... 408
27 -27.7006AKZ Entity 1(prereleased)  ali follow..  11  70.....KDNKLPQQVSELFKQRGCLMIENVIDVDRIDIWFNELVEFCKTHPETAGYTFPNPTSWYNVFWSKPQTEARFHPNMKAIFKAMSKEFYVEDKENCLIDL-DTQLVYGDRIRIREPGKAAALPLHLDSS--TICSSFRTLQGWLALSNNKSGEGTLRVLPSLKLSPKFPGTVPGTGQLFLDKFYPHLHQGIISIPDVKKGSFVFWHCDLPHEVDRHNGNGHSSVLYYGQTPLS............... 378
28 -24.7005iqs_A mol:protein length:315 WelO5  ali model follow..  10  36..NATEVKKYPTAIQDIIINRDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIYGHAIVGFASSAIFRQACRTMFQGEQVESIFHSLSGLPVEIPTGPEPATIRLLLEGREIAVHVGNDFKTLLDLSDQLSYFIPLTVPE-AGGELVVYSLEWNPQEASKYAQMQEYMDDVEFKIKSNQSQSVAYAPGPGDMLLFNGRYYHRVSEVIGNSPRRTIG...................... 292
29 -21.6002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  9  6TKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLM--SSMDDLIRHCNGKLGSYKINGRTKVACYPGNGTGYVRHVDN----PNGDGRCVTCIYYLNKDAKVSGGILRIFPE-------------------------GKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKG 230
30 -21.2004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  9  4TKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLM--SSMDDLIRHCNGKLGSYKINGRTKVACYPGNGTGYVRHVDNP----NGDGRCVTCIYYLNKDAKVSGGILRIFPE-------------------------GKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKG 228
31 -21.0003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  7  12FGTAARAEHMTIAAAIHAADEADAIVMDIVPDGERDAWWDDEGFSIVATSVTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRTTRFVLFSDALDAKPLTIGHDYEVEFLLATRRVYEPFEAPFNFAPHCDDVSYGRDTVNRQLGGFLTIQGAD-NDAGMVM---DNRPESRAALDEMHAEYRETGAIAALERAAKIMLKPQPGQLTLFQSKNLHAIERCTSTRRTMGLFLIHTEDGWRMFD.......... 273
32 -20.7002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  10  1MA-LPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLM--SSMDDLIRHCNGKLGSYKINGRAMVACYPGNGTGYVRHVDN----PNGDGRCVTCIYYLNKDAKVSGGILRIFPE-------------------------GKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKG 224
33 -20.4002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  9  11TKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNP----NGDGRCVTCIYYLNKDAKVSGGILRIFPEGK-------------------------AQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKG 235
34 -20.2005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  9  11TKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLM--SSMDDLVLHCNGKLGSYKVNGRAMVACYPGNGTGYVRHVD----NPNGDGRCVTCIYYLNKDAKVSGGILRIFPE-------------------------GKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKG 235
35 -20.0005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  9  11TKPLPALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLM--SSMDDLICHCNGKLGSYKINGRAMVACYPGNGTGYVRHVD----NCNGDGRCVTCIYYLNKDAKVSGGILRIFPEGK-------------------------AQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADERAAAKVKYLTGEKG 235
36 -19.6005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  11  8..PSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALM--AHVDAVIRHCAGRLGSYKINGRAMVACYPGNGLGYVRHVD----NPHGDGRCITCIYYLNQDVKVHGGLLQIFPEGR-------------------------PVVANIEPLFDRLLIFDRRNPHEVKP--AYATRYAITVWYFDADERARAKDK....... 223
37 -19.3004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  12  16ASHISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAEGELNPAG----VGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRF---RDDDRRMVSAVLYLNEQPHDGGQLRMFL---------------------------ADGVEHDVEPVAGCLVVFLSEVPHEVLP--AGRERLSLTGWFRRRG............... 219
38 -19.1006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  12  36..QLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNY--MITGRTKCMVACYPGSGLGYIRHID----NPNRDGRCVTVLYYLNPNSQDCGGQLWLYPN-------------------------NENKVVKIDPIFDRLLLFDRRNPHEVKP--AYAMRYAITLWYFDEKERALSSQNGT..... 251
39 -19.0003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  13  1.........MGSDKIENLYFQGLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQ------------LDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAI-GMIRTDLSATLFLSEPE-NYQGGELVI-----------------------------DTYGQQSIKLSAGSLVLYPSSSLHQVTP-VLSGERTAAF...................... 184
40 -15.7002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  9  1MSLAQIKSLFATR-----------LYHAPLSEHGPALDPAEFAASCYSIAED-DDAGQEWCEREGYPGYTSYASLTDLPWRFPIFADLVKDAHVAAFAEDLEFELDGKALRLEDIWINILPEGGVHGSH--------IHPHSVISGTTYVA-MPEGTSALKLEDPRLPFMMAAPTRRKGARE---------ELRTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGEG.............. 210
41 -15.5006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  11  38.EFLSHLQNFKDFDYTEICND--VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVF----NYVAPFVRHLYNNYKTKDINLAFVVKYDMERQSELAPHHD---------SSTYTLNIALNEYGKEAGGCEF-----------------------------IRHKFIWQGQKVGYATIHAGKLYHRALP-ITSGKRYILVS..................... 226
42 -15.1003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  7  26IKGMFNPKIWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFK-LRQILYSKQYRDFFGYVTKA-GKLSGSKTDMSINTYTKGCHLLTHDDVI----SRRISFILYLPDPDRKSHYGGGLRLFPSILPN--------------------VPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ............... 249
43 -15.0004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  10  21.SDYEEQQLQKEEEARKV--KSGIRQMRLFSQDECAKIEARIDEVRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHNSAVINDYQPGGCIVSHVD-------------------PIHIFERPIVSVSFFSDSALCFGCKFQFKPIR---------VSEPVLSLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRLDAPRL........... 244
44 -14.7004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  7  23IKGMFNPKIWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFK-LRQILYSKQYRDFFGYVTKA-GKLSGSKTDMSINTYTKGCHLLTHDDVI----SRRISFILYLPDPDRKSHYGGGLRLFPSILPN--------------------VPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ............... 246
45 -14.7003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  7  7IKGMFNPKIWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFK-LRQILYSKQYRDFFGYVTKA-GKLSGSKTDMSINTYTKGCHLLTHDDVI----SRRISFILYLPDPDRKSHYGGGLRLFPSILP--------------------NVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ............... 230
46 -14.4003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  9  15.........................LSDHGPAIDAEEMESSCYAIAEDDEAGQGW-----CEENGYPGYTSYASLTDLPWRFPIFADLVKDAHVAAFAEDLEFDLDGRALELEDLWINILPEGGSHASH--------IHPHSVISGTTYVS-MPGGTSALKLEDPRHAMMMAAPARRKTARD---------ELRQFIYVTPAVGDVLLWESWLRHEVPMNMSEDDRISVSFNYRWAE............... 205
47 -13.2004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  9  95...........RTAYFVCDHDGSVELPNVLPKELVEEFTEKFESIQTGRKKDTDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTADGHRIRKPHKDNL-------DITPSSLFYFGNFQNTEGYLEL------------------------------TDKNCKVFVQPGDVLFFKGNEYHVVAN--TSGWRIGLVY-FAHKGS.............. 300
48 -13.2004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  12  1.DESEYEERRDAEARR----SG-IKQASIFTLEECARIEAKIDEVKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLV--NSAVINDYQPGGCIVSHVD-------------------PIHIFERPIVSVSFFSDSALCFGCKFLFKPIR---------VSEPVLHLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRADA.............. 220
49 -12.8004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  10  17.......................IRQMRLFSQDECAKIEARIDEVVAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHNSAVINDYQPGGCIVSHVD-------------------PIHIFERPIVSVSFFSDSALCFGCKFQFKPIR---------VSEPVLSLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRLDAPRLET......... 222
50 -12.7001e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  11  12.................................DQTRLAPDLAYLAAVPTVEEEYDEFSNGFWKHVPLWNASGDSEDRLYRDLKDAAAQPTAHVEHVLKEIVTTVFDGTHLQMARSRNLK--NAIVIPHRDFVELD--EVDRYFRTFMVL---EDSPLAFHSNEDT-------------------------------VIHMRPGEIWFLDAATVH-SAVNFSEISRQSLCVDFAFDG............... 179
51 -12.2004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  13  24.................................DQRRLTDDLAVLAKSNFSSEYSDFACGRWEFNQSGKQEEQRVVVHETPALATPLGQSLPYLNELLDNHFDRDS---IRYARIIRISE--NACIIPHRDYLELE----GKFIRVHLVL---DTNEKCSNTEENN-------------------------------IFHMGRGEIWFLDASLPHSA--CFSPTPRLHLVVDIEGTR............... 187
52 -12.0003pl0_A mol:protein length:254 Uncharacterized protein  ali model follow..  10  2MHVDIELPLGRATALQRLRAQGFCVLTP-MPLDAFDMMLPYWEELAPDLHLKDGGHYRYRRNALHGGMERWFEPLSNEMIHLPSWSALLVALGELFAKLRAPQGGRWYIEAHPFRIDTEGGVGRPTP-HRDGVDF---------VAVVFIGRQGVRGGETRVFDAA-------------------------GPQGVRFTLEQPWTLLLDDQQVIHESTPPAVPAHRDTLVLTYRSGG............... 249
53 -12.0005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  10  9VPRGSHMEGFETSDRPGVCDGKYYEKDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQTWFMP--------GEHEVIDKIQKKTREFLNSKKHCI-NFEDVQVARYKPGQYYYHHYDGD--ACPKDQRLATLMVYLKAPEEGGGGETDFPTLK-----------------------------TKIKPKKGTSIFFYKETLHAGLPVKSGEK........................... 211
54 -11.8001vrb_A mol:protein length:342 Putative asparaginyl hydroxylase  ali model follow..  11  10VTESVLESIISPVTMSEFLEEYW--FTSIPGFEKVRTLENV-LAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALE--LFIPQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDANLIFQIQGEKT---WKLAKNENVSN------PMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHST---KSDQATLALNITFGQPA............... 249
55 -11.5005cu1_A mol:protein length:212 DMSP lyase  ali model follow..  13  1.............................MSSGSMTQTDPAFQNLLAEFQALHARE----------------PALAGFVALPDSLTPQPVTPVRIPPAALMESDPDLTTTAYAAIRDAFIAAGAVAQWRLTYQFMDRFACYCLIGEGGPFASDSLAAYVVYMPAGLY-----FHQHPAEEIYFILAGEAEFLMEGHPPRRLGPGDHVFHPSGHPHATRTYDRP............................. 182
56 -11.5002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  11  4..GFGELKEEWRGEVVHLSWSPRAFLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAK--------------GEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYNAGPEHGGQRVVTMLMYLTTV--EEGGETVLPNAEQKVTGDGWSECAKRG--------------LAVKPIKGDALMFYSLSLHGSCP................................. 205
57 -11.4002r6s_A mol:protein length:325 Gab protein  ali model follow..  9  76...ANQLQPLLLKTLLNRAEGALLINAVGAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSD----------------------------------------------YLRQPHRVMELHNDGTYVEEITDYVLM---MKIDEQNMQGGNSLLLHLDYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNFWLHGRDRPHPDLRRELMRQR.................... 311
58 -11.2001jr7_A mol:protein length:311 HYPOTHETICAL 37.4 KDA PROTEIN IN ILEY-GABD INTERGENIC REGION  ali model follow..  9  62...ANQLQPLLLKTLLNRAEGALLINAVGKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSD----------------------------------------------YLRQPHRVMELHNDGTYVEEITDYVLM---MKIDEQNMQGGNSLLLHLDYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNFWLHGRDRPHPDLRRELMRQRGYFAYAS............. 304
59 -11.2002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  11  1..............MQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDK------------------DEPDLRAPIVSVSLGLPAIFQFGGLK---------------RNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGDCRYNLTFRQAGKKEN............. 207
60 -10.9003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  11  1..........GPHMLDLFADAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDK------------------DEPDLRAPIVSVSLGLPAIFQFGGLK---------------RNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGDCRYNLTFRQAGKK............... 218
61 -10.6005apa_A mol:protein length:220 ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE  ali model follow..  7  23..............VNGLKAQPWWTPKETGYTELVKSLERNWKLIRDEGLAVMDKAKGLFLPEDENLREKGDWSQFTLWQQGRRNENAC--KGAPKTCTLLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPT-------NCRLRMHLGL--VIPKEGCKIRCANETKT--------------------------------EEGKVLIFDDSFEHEV--QDASSFRLIFIVDVWHPELTPQQRRSLPAI... 214
62 -10.3005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  12  20.KGNVIKTEDREIQIISKFEEPLIVVGNVLSDEECDELIELSKSKLARSKVGSSRDVNDIRTSSGA---------------------LDDNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDY---RSAANNRISTLVMYLNDV--EEGGETFFPKLN-----------------------------LSVHPRKGMAVYFEYFTLHGGAP................................. 198
63 -10.2004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  11  5...................AAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDK------------------IHPDLRAPIVSVSLGLPAIFQFGGLK---------------RNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGDCRYNLTFRQAGKK............... 204
64 -10.2004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  13  6..........SGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEAS---------------MAIMRRVQAAAFGPGQTLL---SSVHVLDLEARGYIKPHVDS-----IKFCGATIAGLSL--------------LSPSVMRLVHTQ---------------EPGEWLELLLEPGSLYILRGSASHEILRDEESGRRISVICRSLPEGM.............. 194
65 -10.1004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  10  36VMAEFSDAVTEETLKKQVAEALHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRK-----------ILFEDFRSWLSDISKID---LESTIDMSCAKYEFTDALLCHDDEL------EGRRIAFILYLVPDRSMGGTLDLYSIDEHFQ---------------------PKQIVKSLIPSWNKLVFFSPVSFHQSEVLSEEKSRLSISGWFHGPSLTRPPNYFEP..... 265
66 -9.9601drt_A mol:protein length:324 CLAVAMINATE SYNTHASE 1  ali model follow..  14  1.....MTSVDCTAYGPELRAYAFLDAAHTAAASLPGALATALDTFNAEGSEDGHLLLRGLPVEADADLPTTPSSTPAPEDRSLLTMEAMLGLVGRRLGLHT-TVYHDVYPSPGAHHLSSETSETLLEFHTEMAYHRLQPNYVML---ACSRADHERTAATLVASVRKALPLLDERTEDPADKEAVAALSKALDEVTEAVYLEPGDLLIVDNRTTHARTPPRWDGKDRWLHRVYIRTDGGERAGDVVAFTPRG 324
67 -9.8403lag_A mol:protein length:98 uncharacterized protein RPA4178  ali model follow..  13  10...................................................................................................................................................IQIDNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQH-DVRNESTAEIVFLEIELKAGS............... 98
68 -9.6702fqp_A mol:protein length:97 hypothetical protein BP2299  ali model follow..  16  11...................................................................................................................................................VQIDNERVKVTEWRFPPGG-ETGWHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEH-NVINPSDTEFVFVEIEIKAA................ 97
69 -9.5906daw_A mol:protein length:342 Non-heme iron hydroxylase  ali model follow..  13  15.............................LDAAEGAALDELTRSVLRDHGASSSPSLLDDLSLVAHRMPPRLIRELRRFRTAEVVRGLPVDDRFLTLATAHLG---DVLPVPSHENDQSGHGTVELAWHTEDGFHPYRCDYLLLTGVAGVDQVVLSDEHREVLSQPRDPAFMSPLPGDPEAAAALEALTAELQRNLTDVVLSPGDLLVIDNRVVHGRAAARFDGTDRWLKKAVVTRDLRKSRAHRKSAAER. 339
70 -9.4604b29_A mol:protein length:217 DIMETHYLSULFONIOPROPIONATE LYASE  ali model follow..  10  1MGSSSSGLVPRGSHMAS-------------GRAALTHLLEAARDWHEALPEFRAFATWPEDLRWADRPAHALPVIDHLTRDPGHA-----SDQSQPLRDALVAAAPHV------------------EWRHGRDFLNRFGWFELAGPSGHFLTQSLRVTVGYWGPGLD-----WHEHLPEELYSVVSGRALFHLRNAPDLMLEPGQTRFHPANAPHAMTTLTDP............................. 191
71 -9.3603eat_X mol:protein length:293 Pyoverdine biosynthesis protein PvcB  ali model follow..  8  31LEPGRPGMHVGELPAQWLKSHHLLLLRGF-DAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHI-------------------------------------------------------ANNYVPLHWDGMY---LETVPEFQVFHCVDAPGDSDG-WRRASGRYQRSAAHYSPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLLLHGREAFAHRAPRHLRRVHIHAEP............... 283
72 -9.2204oj8_A mol:protein length:293 (5R)-carbapenem-3-carboxylate synthase  ali model follow..  8  33IDHRDFLEAKTETIKNLLMRQGFVVVKNLIDSDTFRDIYSAYGTIVEYADEKIGVGFGYRDTLKLEGEKG-----------------------------------------------KIVTGRGQLPFHADGGLLLSQVDQVFLLACQEMPAHLLRV--LEEETFEVRKMLIYFPFDEGQPASWEPRIVGFTDHETQAF--EDGDLLIMDNRVIHEREEFNDDDIVRRL....................... 279
73 -9.1403qh6_A mol:protein length:157 CT296  ali model follow..  12  1...SRMRAVLHLEHKRYFQNHGHILFEGLAPVSDCKQLEAELKLFLKEVAVVKDRHLQRWRENVHRT--PGVQMIVKRVRLDHLAAELTHRSRVALVRDLWVQKQEEILFDDCDLCLSGEKAGWGLFFSGEYPQDVFDWGAGDTAIILRFSSAGFPN............................................................................................... 157
74 -9.1202og5_A mol:protein length:357 Putative oxygenase  ali model follow..  14  24GPASRYDVTLDQSDAELVEEIAWKLATQATGRPDDAEWVEAARNAWHAWPATLRRDLAGFRRDSGPDGAIVLRGL-TPRVNGSVQREASLGAAVLLMTACGLGLVQDVVPVPGMEEFQGNAGSTLLTFHNENAFHEHRPDFVML---LCLRADPTGRAGLRTACVRRVLPLLSDSTVTERAAEALRELQAHFDATAVTHRLLPGELAIVDNVTVHGRTEPRYDGTDRWLQRTFVLTDL.............. 329
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.