current user: public

If you have questions about the server, please let us know.

Query: 4yv6_A mol:protein length:284 Transcriptional regulator, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280
# Score Template Links and tools%idFirst MDKELGKTLRRLRQGKQVSISSLADEHLSKSQISRFERGESEISCSRLLNLLDKLNITIDEFVSTHSKTHTHFFTLLSRVRKYYAEKNVAKLLKLLEDYAHKDYESTMIKAILSSIEPTVEPSEEEVTRLTDYLFSVEQWGYYEIILLGNCSRFINYNTLFLLTKEMVTSFAYSEQNKTNKTLVTQLSINCLIISIDYSYFDHSHYLIEKIEFLLRDELNFYEKTVFLYVHGYYKLKQGQVSGKDDMRQALQIFKYLGEDALYYSYKEHYRKEVLGDEEDEEEGLast
1 -89.2004yv6_A mol:protein length:284 Transcriptional regulator  ali model  100  1MDKELGKTLRRLRQGKQVSISSLADEHLSKSQISRFERGESEISCSRLLNLLDKLNITIDEFVSTHSKTHTHFFTLLSRVRKYYAEKNVAKLLKLLEDYAHKDYESTMIKAILSSIEPTVEPSEEEVTRLTDYLFSVEQWGYYEIILLGNCSRFINYNTLFLLTKEMVTSFAYSEQNKTNKTLVTQLSINCLIISIDYSYFDHSHYLIEKIEFLLRDELNFYEKTVFLYVHGYYKLKQGQVSGKDDMRQALQIFKYLGEDALYYSYKEHYRKEVLGDEEDEEEG 284
2 -74.4004ryk_A mol:protein length:306 Lmo0325 protein  ali model follow..  17  2..GSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITLSLFEEILKRIMVPLDEFFFIYRDFSTEDDSFWIDFVELSGKNDVVGMQALLDKITLERTEQSEVRKAILHTFDESNISDEYKKIIHDYLWKMQTWTLEEVRIFSNGISFFEEEVQIHFYQIMLKSYEKYRYYDRGRLLFCHLFANLTDELIIQNKINYANLVLEKLKEASGSFNSAFYRIVANYYQGAIWMKEGEEKGYRQAKRAIQTWKELHYEAIADLYSVVLKQFLEKENIQ.... 297
3 -66.6002aw6_A mol:protein length:317 PrgX  ali model follow..  15  2..FKIGSVLKQIRQELNYHQIDLYSGIMSKSVYIKVEADSRPISVEELSKFSERLGVNFFEILNRAGMNTKSVNEGKEKLLISKIFTNPDLFDKNFQRIEPKRLTSLQYFSIYLGYIEVPTFNKTITSDLKHLYDKRTTFFGIDYEIVSNLLNVLPYEEVSSIIKPMYPIVDSFGK--DYDLTIQTVLKNALTISIMNRNLKEAQYYINQFEHLKTIKNNGYYDLEINYLKQIYQFLTDKNDSYLNAVNIINIFKIIGKEDIHRSLVEELTKISAKEKFTPPK. 293
4 -63.0005v5t_A mol:protein length:306 Conserved domain protein  ali model follow..  14  8..RPLGEEIERIRKGKNIPLRVFDENGVSSRSYQRFVQGNSELRISDLAIIVEILSISPMEMTEKLTPMSKT-VLAKEQFNQAIFSKNFQESSRIVADYRAYYEKSALEYLFNPQTVVTKEEIIALENQILERLINADVYTIFNLKFLALQKNVGLQPFPTSLLFRVLQSVNEREIIDRSLEIIEQVIIDFLFAAIVSQNVPHILHVLSMFKEYEVGENNWRMILWKKIAEKIEMILTNEEADWSIFKEQILLSITLFLPKAKQEFAGQLEKIEDSLKEIKENG 306
5 -48.0005dl2_A mol:protein length:234 Regulator of protease B (RopB)  ali model follow..  18  1........................................................MNVDEFLFISNNFKYKEFIDMDTAKHYFECRNIEGLNHILDSYKDSKSTKEKNLFALVKVTLTEEDCLTERTYLSNYLINIETWSHYETVLFNNCMFIFESCFIEMVFSKVILNLDKYNTLRYYGNESIRMFVNMLILFIQRQEYDKASEILAKIEDYQLNDDCLYERCCVSFFDGIIGLINGKEGAEQKCVQILEIFQLLNCKTIHHMFQTYLEAIKHKLSLE.... 228
6 -46.3002qfc_A mol:protein length:293 PlcR protein  ali model follow..  14  2QAEKLGSEIKKIRVLRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYKKVDYEYCILELKKLLNQQLT-VYQNLYIENAIANIYAENGYLKKGIDLFEQIKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEEAEIEDAYKKASFFFDILEMHAYKEALVNKISRL........... 286
7 -46.0005jub_A mol:protein length:310 Transcriptional regulator  ali model follow..  14  3LKDSIGLRIKTERERQQMSREVLCLDGLTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIDEYYEMKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILILSFTSWEESPKVEEIYEDLFEQVKRKRKFSTNDLLVIDYYFFHLRKQYDKKLFERIIKRVLNQEIWTDDVYVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIEKSQLYSYKPSVFVLKAKYELLHNKKEAAENYDKAIVFASVLEDSVLEESIKAGKLADGLGAGWSHPQ. 307
8 -40.2005fd4_A mol:protein length:324 ComR  ali model follow..  14  22.DKEFGQRVRQLRESASMTREQFCDDELSVRQLTRIEAGASKPTFSKIQYIATRLGMGLYELMPDYVSLPERYSKLKFDVLRTPTYGNEDLAEKRDAMMTEKIAIDAIQSRIDTLESGTAGFGKEILEDYFEQIFRKRKYELNDLLIVRLHLEYVIFRQFLKIIEHLHEQINIINS--NDLFVLRDTLLSCVNILGSKKYYEPIPKIFDSVDKIIQSTQDFQKKPIVSVLKWKYALFVDRDEAEKHYLDAVLFAKLIENRELEQKIEEDWRV............ 315
9 -27.6003f51_A mol:protein length:117 Clp gene regulator (ClgR)  ali model follow..  28  25LREALGAALRSFRADKGVTLRELAEASVSPGYLSELERGRKEVSSELLASVCHALGASVADVL............................................................................................................................................................................................................................. 88
10 -27.5003kxa_A mol:protein length:141 Putative uncharacterized protein  ali model follow..  21  59ALKAGGETFVSLRMKKGFTQSELATAALPQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRAAFERRYEYMEQ................................................................................................................................................................................................................. 134
11 -27.2005woq_A mol:protein length:120 Transcriptional regulator ClgR  ali model follow..  23  7LREVIGDVLRNARTDQGRTLREVSDAAVSLGYLSEVERGRKEASSELLSAICDALDVPLSRVL............................................................................................................................................................................................................................. 70
12 -26.6002p5t_A mol:protein length:158 Putative transcriptional regulator PezA  ali model follow..  20  2....IGKNIKSLRKTHDLTQLEFARIVISRNSLSRYENGTSSVSTELIDIICQKFNVSYVDIVGEDKMLNPVEDYELTLKIEIVKERGANLLSRLYR........................................................................................................................................................................................... 95
13 -24.8001y9q_A mol:protein length:192 transcriptional regulator, HTH_3 family  ali model follow..  23  8FKSQIANQLKNLRKSRGLSLDATAQLTVSKAMLGQIERGESSPTIATLWKIASGLEASFSAFF............................................................................................................................................................................................................................. 71
14 -24.6003vk0_A mol:protein length:114 Transcriptional regulator  ali model follow..  22  18LRAVLAYNMRLFRVNKGWSQEELARQCLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLL............................................................................................................................................................................................................................. 81
15 -24.5003ivp_A mol:protein length:126 Putative transposon-related DNA-binding protein  ali model follow..  14  11..RALGLAIKEARKKQGLTREQVGAMIIDPRYLTNIENKGQHPSLQVLYDLVSLLNVSVDEFFL-SSQVKSTKRRQLENKIDNFTDADLVIMESVADGIVKS...................................................................................................................................................................................... 112
16 -24.4003fya_A mol:protein length:99 Regulatory protein  ali model follow..  17  19LLSKVSFVIKKIRLEKGMTQEDLAYKSLDATYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD.................................................................................................................................................................................................................. 93
17 -24.1003g5g_A mol:protein length:99 Regulatory protein  ali model follow..  17  19LLSKVSFVIKKIRLEKGMTQEDLAYKSLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD.................................................................................................................................................................................................................. 93
18 -24.1003op9_A mol:protein length:114 Pli0006 protein  ali model follow..  14  6IQHQFAENLSRLKKEHGLKNHQIAELLVQTRTVAYYMSGETKPDIEKLIRLATYFHLSIDELVGYVQEDKVWNDLSLKQWLLSLNLRSEEEIAKIKI........................................................................................................................................................................................... 103
19 -24.1002l49_A mol:protein length:99 C protein  ali model follow..  14  1MSNTISEKIVLMRKSEYLSRQQLADLTVPYGTLSYYESGRSTPPTDVMMNILQTPQFTKYTLWFMTNQIAPESGQIAPALAHFGQNETTSP................................................................................................................................................................................................. 92
20 -23.7005uk3_A mol:protein length:176 Uncharacterized protein  ali model follow..  11  17.RQIMSNQFIKAKESKGLTYQQMAQLLVNKVWLTSVLHGQNCCDIQLAHRICDTLGISHEYAN............................................................................................................................................................................................................................. 79
21 -23.5005k98_B mol:protein length:91 Antitoxin HipB  ali model follow..  19  14..TQLANAMKLVRQQNGWTQSELAKKIIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCD............................................................................................................................................................................................................................. 75
22 -23.3004pu3_D mol:protein length:118 Toxin-antitoxin system antidote transcriptional repressor Xre family  ali model follow..  24  42..QSLGLLIKERRKSAALTQDVAAMLCVTKKTLIRVEKGED-VYISTVFKILDGLGIDIVSAQ............................................................................................................................................................................................................................. 102
23 -23.2003mlf_A mol:protein length:111 transcriptional regulator  ali model follow..  24  16..SNAMKTLKELRTDYGLTQKELGDLFVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDIF............................................................................................................................................................................................................................. 77
24 -23.2002wiu_B mol:protein length:88 HTH-TYPE TRANSCRIPTIONAL REGULATOR HIPB  ali model follow..  19  11..TQLANAMKLVRQQNGWTQSELAKKIIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCD............................................................................................................................................................................................................................. 72
25 -22.8004ia8_A mol:protein length:82 Regulatory protein  ali model follow..  17  8LLSKVSFVIKKIRLEKGMTQEDLAYKSLDRTAISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD.................................................................................................................................................................................................................. 82
26 -22.8004y42_A mol:protein length:156 Cyanate hydratase  ali model follow..  14  11.RETLTDTIMMAKIRKNLTFEAINQGTLSLAFVTAALLGQHPLPEQAARVVAEKLDLDEDAIR............................................................................................................................................................................................................................. 73
27 -22.7004i6t_A mol:protein length:82 Regulatory protein  ali model follow..  17  8LLSKVSFVIKKIRLEKGMTQEDLAYKSLDRAYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD.................................................................................................................................................................................................................. 82
28 -22.6004f8d_A mol:protein length:82 Regulatory protein  ali model follow..  17  8LLSKVSFVIKKIRLEKGMTQEDLAYKSLDRTYISGIERNSANLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD.................................................................................................................................................................................................................. 82
29 -22.5004fn3_A mol:protein length:82 Regulatory protein  ali model follow..  17  8LLSKVSFVIKKIRLEKGMTQEDLAYKSLDRTYISGIERNSRNLTIKALELIMKGLEVSDVVFFEMLIKEILKHD.................................................................................................................................................................................................................. 82
30 -22.5004i6u_A mol:protein length:82 Regulatory protein  ali model follow..  17  8LLSKVSFVIKKIRLEKGMTQEDLAYKSLDRTFISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD.................................................................................................................................................................................................................. 82
31 -22.4001x57_A mol:protein length:91 Endothelial differentiation-related factor 1  ali model follow..  19  10VTLEVGKVIQQGRQSKGLTQKDLATKIEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGKD............................................................................................................................................................................................................................. 73
32 -22.3001dw9_A mol:protein length:156 CYANATE LYASE  ali model follow..  16  11.RLDLADAILLSKAKKDLSFAEIADGTLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSIL............................................................................................................................................................................................................................. 73
33 -22.2002ewt_A mol:protein length:71 putative DNA-binding protein  ali model follow..  23  5YAKQLGAKLRAIRTQQGLSLHGVEEKSWKAVVVGSYERGDRAVTVQRLAELADFYGVPVQELL............................................................................................................................................................................................................................. 70
34 -22.1002b5a_A mol:protein length:77 C.BclI  ali model follow..  30  7IKRKFGRTLKKIRTQKGVSQEELADLALHRTYISEVERGDRNISLINIHKICAALDIPASTFFRKMEEEN...................................................................................................................................................................................................................... 77
35 -22.0001y7y_A mol:protein length:74 C.AhdI  ali model follow..  31  10DLVKFGQRLRELRTAKGLSQETLAFLSLDRSYVGGVERGQRNVSLVNILKLATALDIEPRELF............................................................................................................................................................................................................................. 73
36 -21.9001b0n_A mol:protein length:111 PROTEIN (SINR PROTEIN)  ali model follow..  18  2....IGQRIKQYRKEKGYSLSELAEKAVAKSYLSSIERNQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLVRDAMTSGVSKKQFREFLDYQKWRKSQKEE................................................................................................................................................................................... 111
37 -21.9004z5h_A mol:protein length:72 Antitoxin HipB  ali model follow..  18  9..TQLANAMKLVRQQNGWTQAELAKKIIKQATISNFENNPDNTTLTTFFKILQSLELSMT................................................................................................................................................................................................................................ 67
38 -21.6002mez_A mol:protein length:106 Multiprotein Bridging Factor (MBP-like)  ali model follow..  19  7IVTDYYKIIKTAREQLGISQQQLAQKLVSENIVKRFESGKLKPTISQARQLEKILGIKLVTPLENNEESEKEFDDTGLTLGDVVNIKEGKKLE............................................................................................................................................................................................... 100
39 -21.3001zz6_A mol:protein length:198 Hydroxypropylphosphonic Acid Epoxidase  ali model follow..  15  7ASTGFAELLKDRREQVKMDHAALASLLETPETVAAWENGEGGLTLTQLGRIAHVLGTSIGALT............................................................................................................................................................................................................................. 71
40 -21.1001rio_A mol:protein length:98 Repressor protein CI  ali model follow..  18  17..RRLKAIYEKKKNELGLSQESVADKMMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFS............................................................................................................................................................................................................................. 78
41 -21.0002ef8_A mol:protein length:84 Putative transcription factor  ali model follow..  29  8.YRCLVQLLTKLRKEASLSQSELAIFLLSQSDISKIESFERRLDALELFELLEVVASRLGLPM............................................................................................................................................................................................................................. 70
42 -20.9003f6w_A mol:protein length:83 XRE-family like protein  ali model follow..  14  12.YQALLDLLLEARSAAGITQKELAARLRPQSFVSKTENAERRLDVIEFMDFCRGIGTDPYALLSKLEA........................................................................................................................................................................................................................ 79
43 -20.9002k9q_A mol:protein length:77 uncharacterized protein  ali model follow..  19  1..MELSNELKVERIRLSLTAKSVAEEMISRQQLCNIEQSETAPVVVKYIAFLRSKGVDLNALF............................................................................................................................................................................................................................. 62
44 -20.8002ofy_A mol:protein length:86 Putative XRE-family transcriptional regulator  ali model follow..  19  13RGQRLGELLRSAR--GDMSMVTVAFDAISVETLRKIETGRITPAFFTIAAVARVLDLSLDDVA............................................................................................................................................................................................................................. 75
45 -20.6001adr_A mol:protein length:76 P22 C2 REPRESSOR  ali model follow..  26  4..QLMGERIRARRKKLKIRQAALGKMVVSNVAISQWERSETEPNGENLLALSKALQCSPDYLL............................................................................................................................................................................................................................. 65
46 -20.4001lli_A mol:protein length:92 PROTEIN (LAMBDA REPRESSOR)  ali model follow..  21  16..RRLKAIYEKKKNELGLSQESLADKLMGQSGIGALFNGINALNAYNAALLAKILKVSVEEFS............................................................................................................................................................................................................................. 77
47 -20.2004o8b_A mol:protein length:122 Uncharacterized protein  ali model follow..  13  2....LGTRLKAARIRAGYSQKQLGMLVSASARMNQYERERHSPNMRTSEQLAMVLQVPM-AYLYCPEDELAELILKVSSLTPEFKKELTRFIEQLLAAQGST...................................................................................................................................................................................... 103
48 -19.9005a7l_A mol:protein length:80 CI  ali model follow..  15  1MQTDTSNRLKQIMAERNLKQVDILNLSLSKSTLSQYVNSVQSPDQNRIYLLAKTLGVSEAWLM............................................................................................................................................................................................................................. 73
49 -19.9003kz3_A mol:protein length:80 Repressor protein CI  ali model follow..  18  11..RRLKAIWEKKKNELGLSYESVADKMMGQSAVAALFNGINALNAYNAALLAKILKVSVEEFS............................................................................................................................................................................................................................. 72
50 -19.9003qq6_A mol:protein length:78 HTH-type transcriptional regulator sinR  ali model follow..  23  2.SSMIGQRIKQYRKEKGYSLSELAEKAVAKSYLSSIERNQTNPSIQFLEKVSAVLDVSVHTLLDEKHETE...................................................................................................................................................................................................................... 72
51 -19.6002kpj_A mol:protein length:94 SOS-response transcriptional repressor, LexA  ali model follow..  12  6QKAIFSENLNSYIAKSEKTQLEIAKSIVSPQTFNTWCKGIAIPRMGKVQALADYFNINKSDLI............................................................................................................................................................................................................................. 69
52 -19.6003eus_A mol:protein length:86 DNA-binding protein  ali model follow..  15  12.HVYLCQRLRQARLDAGLTQADLAERLKPQSFVAKVETRERRLDVIEFAKWMAACEGL.................................................................................................................................................................................................................................. 69
53 -19.4003omt_A mol:protein length:73 uncharacterized protein  ali model follow..  16  6.ERKIFNRLKSVLAEKGKTNLWLTETLKNKTTVSKWCTNDVQPSLETLFDIAEALNVDVRELI............................................................................................................................................................................................................................. 68
54 -19.4002jvl_A mol:protein length:107 TrMBF1  ali model follow..  22  31VGKEVGKAIEQGRQEPTMTQAELGKEIETAATVASYERGTATPDQNILSKMERVLNVKLRGAN............................................................................................................................................................................................................................. 96
55 -19.3005j2y_A mol:protein length:80 Regulatory protein  ali model follow..  22  10..QNMAFRAKATRTARRESQETFWSRFISQSCGSRFENGENLPPIYLLLHFYIEGQITDRQLA............................................................................................................................................................................................................................. 72
56 -19.2003lfp_A mol:protein length:98 Csp231I C protein  ali model follow..  13  2....LIRRLKDARLRAGISQEKLGVLASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYLYTPEDDLAQIILTW-----NELNEQERKRINFYIRKKAK....................................................................................................................................................................................... 98
57 -19.1003bs3_A mol:protein length:76 Putative DNA-binding protein  ali model follow..  20  8.QQMMLNRIKVVLAEKQRTNRWLAEQMKSENTISRWCSNKSQPSLDMLVKVAELLNVDPRQLI............................................................................................................................................................................................................................. 70
58 -19.0004ghj_A mol:protein length:101 Probable transcriptional regulator  ali model follow..  19  27LAEEIGDRLKQARLNRDLTQSEVAEIAIARKTVLNAEKGKVQLDIMIAILMALDLTEQIDLFI............................................................................................................................................................................................................................. 90
59 -19.0002xiu_A mol:protein length:66 CYLR2  ali model follow..  21  2....IINNLKLIREKKKISQSELAALLVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIFQWQPE........................................................................................................................................................................................................................ 66
60 -18.9001utx_A mol:protein length:66 CYLR2  ali model follow..  21  2....IINNLKLIREKKKISQSELAALLVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE........................................................................................................................................................................................................................ 66
61 -18.4003zhi_A mol:protein length:83 CI  ali model follow..  14  2LKTDTSNRLKQIMAERNLKQVDILNLSLSKSTLSAYVASVQSPDQNRIYLLAKTLGVSEAWLM............................................................................................................................................................................................................................. 74
62 -18.3003b7h_A mol:protein length:78 Prophage Lp1 protein 11  ali model follow..  15  4DGEFVSEHLMELITQQNLTINRVATLALNQSTVNAMFEGRSRPTITTIRKVCGTLGISVHDFFDFPPYNEVEK................................................................................................................................................................................................................... 78
63 -18.0003zhm_A mol:protein length:79 CI  ali model follow..  14  1.KTDTSNRLKQIMAERNLKQVDILNLSLSKSTLSQYVNSVQSPDQNRIYLLAKTLGVSEAWLM............................................................................................................................................................................................................................. 72
64 -17.4006b9s_A mol:protein length:457 Methylphosphonate synthase  ali model follow..  13  12YLIRSGNNFLGILNDIKRRPEDAANELVSIEEINSIISGKQKISPSLIEKAVNIWPVNERDFYIVSDDCSSG.................................................................................................................................................................................................................... 84
65 -17.4001sq8_A mol:protein length:64 dh434  ali model follow..  19  1..MLMGERIRARRIQLGLNQAELAQKVVDQQAIEQLENGKA-KRPRFLPELARALGVAVDWLL............................................................................................................................................................................................................................. 61
66 -17.4001per_L mol:protein length:69 PROTEIN (434 REPRESSOR)  ali model follow..  16  1...SISSRVKSKRIQLGLNQAELAQKVTTQQSIEQLENGKT-KRPRFLPELASALGVSVDWLL............................................................................................................................................................................................................................. 60
67 -17.3001s4k_A mol:protein length:120 putative cytoplasmic protein ydil  ali model follow..  16  5.....ALELQALRRIFDMTIEECTIYINNSATWQRWEAGDIPISPEIIARLKEMKARRQRRINAIVDKINNR.................................................................................................................................................................................................................... 74
68 -17.2001zug_A mol:protein length:71 PHAGE 434 CRO PROTEIN  ali model follow..  17  2..QTLSERLKKRRIALKMTQTELATKAVKQQSIQLIEAGVT-KRPRFLFEIAMALNCDPVWLQY............................................................................................................................................................................................................................ 63
69 -16.9006b9r_A mol:protein length:450 Hydroxyethylphosphonate dioxygenase  ali model follow..  19  235.PGDHGAMLRSVMAARLTTVTELADRSLKTDRVAALCRTPARAEWPELSALAEALGVSVRELL............................................................................................................................................................................................................................. 297
70 -16.8002r63_A mol:protein length:63 REPRESSOR PROTEIN FROM BACTERIOPHAGE 434  ali model follow..  15  1...SISSRVKSKMIQLGLNQAELAQKVTTQQSIEQLENGKT-KRPRFLPELASALGVSVDWLL............................................................................................................................................................................................................................. 60
71 -16.7005y69_A mol:protein length:151 chain A  ali model follow..  10  1.....GSMLDEFLKKHDLTRYQLSKLTISQNTLKDQNEKPLNYTVSILRSLSMISGLSVSDVLFELEDIEKNSDD................................................................................................................................................................................................................. 76
72 -15.2005u55_A mol:protein length:190 (S)-2-hydroxypropylphosphonic acid epoxidase  ali model follow..  14  3........VRTLAV-GKAHLEALLATRMTLEHLQDVRHDATQDGLEHLQNVAQYLAIPLSEFFVGQTQSDLDDGVKIAR............................................................................................................................................................................................................. 76
73 -15.1003rzz_A mol:protein length:446 Hydroxyethylphoshphonate Dioxygenase (PhpD)  ali model follow..  15  7....DPFKLAHWMNARKYTAAQTADLALPLDDLRRLLGDENEPDPAAATALAEALSVEPSQLA............................................................................................................................................................................................................................. 67
74 -14.7002o38_A mol:protein length:120 Hypothetical protein  ali model follow..  18  37TKLRLAYALNAVIDRARLSQAAAAARLINQPKVSALRNYKEGFSVERLMTLLNALDQDVE................................................................................................................................................................................................................................ 98
75 -14.5005zvv_A mol:protein length:382 AimR transcriptional regulator  ali model follow..  1...KLKQMIKNECEKDNQLAARLAKLAYEKVNGFYKFVNTPEKEMENLGGLLKIVK--LSEYFLELDPNKKCARQS---VEYSDINQWDTLTDKIIINLCNSKNSTSQEWGKVYSLHRKLNKNEISLNDAIRESGKCKI-KSAEMLFFSNAMLMYIGEFGLMKSTSKLLEFDDLPEGFIKESFKSRVSMLEANISLNENSLLEARQHSNRAIENSNVNR---ICFFAYLTIGNTLIFEDYDEAKKAYIKGQKYAKNPVHQEMLDGALCFLSNIWKKENQWVNY. 286

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 1 2 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Jambon M, Godzik A. New avenues in protein function prediction. Protein Sci. 2006 Jun;15(6):1527-9.