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Query: 5epa_A mol:protein length:279 SnoK, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MARSADPDPGGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKRTLPTLVHDDETGLPLNELSATLTAWIALTDVPVERGCMSYVPGSHLRAREDRQEHMTSFAEFRDLADVWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDADATYRPGVQDGHLSRLSPGDPLEGELFPLVTAGTRQLast
1 -111.0005epa_A mol:protein length:279 SnoK  ali model  100  1MARSADPDPGGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKRTLPTLVHDDETGLPLNELSATLTAWIALTDVPVERGCMSYVPGSHLRAREDRQEHMTSFAEFRDLADVWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDADATYRPGVQDGHLSRLSPGDPLEGELFPLVTAGTRQ 272
2 -93.0005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  39  1MARSADQETEPAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEES-VRWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENDASVPTAPHHDAFAFPFSTAGTALTAWVALVDVPVERGCMTFVPGSHLLPDPDTGDEPWAGAF------TRPGEIWMPRVTVPLRAGDCTFHHARTVHSAGANSTDEPRLSTSAVYMDATAAYRPTGIATGADPLREGAPLTGDRFPLLRRPQTR 282
3 -90.8004xab_A mol:protein length:252 EvdO2  ali model follow..  21  1........MDAMEVVGTIDHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDREGPPLLPQIIKPEKYVPELLDSPHFARCRSIASAFLAEEELEFYGHAILKPPRYGAPTPWHQDEAYMDPRWRRRGLSIWTTLDEATVESGCLHYLPGGHRGPVLPHHHIDNDDRIRG---LMTDDVDPTSAVACPLAPGGAVVHDFRTPHYAGPNLTDQPRRAYVLVFMSAPAEVADPEPRPW---MDWG................. 252
4 -86.4004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  25  1...........MTTATLDRAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLREGDERPVLYRVHNLEKQDAPERDLLHREELAQLAAAFVDGPVVPTAYALVLKEPYRAAEVPWHRDRVNV---GPRTVCNLSICLDDAGPHNGCLEAVPGSHLLPDDAE---------------VAKVRATGPVVPVPVSQGDVVVHDVRLVHGSGPNANGSWRRTIVIEYADPAAPPAP.............................. 223
5 -86.2005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  20  2.............GRMQLTADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQEVQGPHR-ILEEDGRTVRALYASHTRQSVFDQLSRSDRLLGPATQLLECDLYIHQFKINTKRAFGGDSWAWHQDFIVWRDTPAPRAVNVGVFLSDVTEFNGPVVFLSGSHQRGTVERKARVDPDDYSMTPAELSQMVEKHPMVSPKAASGSVMLFHPEIIHGSAPNISPFARDLLIITYNDVANAPKPAGEPPEYVIGRDTTPLVSRSGPLHEAA... 268
6 -85.7002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  19  7.ASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTS......................... 266
7 -84.7002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  21  3................CLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPEN----------QPTAELPFPQLYT.... 291
8 -83.4004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  16  18RPRLDPVVHSEWTNDAPISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPAALDADTEPQSNEIRSIFEIHAQSPVMARLAADARLADVARFLLGDEVYIHQSRLNYKPGFKGREFYWHSDFETWHVEDRMRALSMSVLLAENTPHNGPLMVIPGSHRTYLTCVGETPDDHYLSSDEESLAELAHRHGIVAPTGKPGTVILFDCNLMHGSNGNITPFPRANAFLVYNAVSNRLEKGVEKPRPWFLARRGELRVERGPLVETVPA. 308
9 -82.6002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  16  2.........SHMSKKFALTAEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDAISGGTNIANYDRHLDDDFLASHICRPEICDRVESILGPNVLCWRTEFFPKYPG-DEGTDWHQADTFANASGFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDETKRMTYEPDANNQIDENWKPDEASAVPMQMKAGQFIIFWSTLMHASYPHESQEMRMGFASRYVPSFVHVYPDSDEKYGAVQVIGDETPE............ 296
10 -82.0003gja_A mol:protein length:319 CytC3  ali model follow..  18  2.......TTVSEQANFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAI-YPDSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEFFPKYQG-DEGTDWHQAATFAHATGKPGTITVWTAFTHSTEQNGCLQLMPGTHTSMNYDESKGMDYDDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWSNTMHASLPHTGSKTRMGFAARYVPTQVQVYPGTEEKYGAVLTSGVDEYGH........... 299
11 -81.6003emr_A mol:protein length:310 EctD  ali model follow..  17  19.KDPVIYTDRSKDNQAPITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKEPESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLLGSDVYVHQSRINYKPGFKGKEFDWHSDFETWHVEDRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPDNNGVPDEESLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSVKNRLVEPFSGGEK---RPEYIAVREKQPV....... 295
12 -77.7004xbz_A mol:protein length:334 EvdO1  ali model follow..  17  22.LRVVNRIAECDIRRTGLLPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAWSTRSEPDQPGAAPVRIEYVVDKARPIAMLAGHPLLLRIMEQLVGPNLIPTWDSMVFKTPAGAPRLAWHRDAGLYDNAVAGRVIDAGIYLDPAP-EDNCVWCIPESNYWGDDRLTATADQLNA--------SEWDTTGAVPAVMQPGDLLLHNILTLHGAPAVVGKQ-RRVIYFEYRPAEVEWQLGPHSA......................... 269
13 -77.1002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  18  4.MTNVTGDYTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMREGLVALGHATLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFLSTTISEEPSFHYLTPFHQDGFYIGPNQ--DFRTFWIPLIRTTRESGGVALADGSHRRGKRDHNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLSMDTRVQPAKSHRGFNAMTPWTEDASKGIMAKITGTPT....... 285
14 -71.2003nnf_A mol:protein length:344 CurA  ali model follow..  12  1MSSGVDLGTENNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNALFSVEPNHKG-LPWHVGVGSFSFTKTEDGASIWIPLDKITKEHGGMQYVSTKIFPGQFYYSVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPHKLRRAFVIRLVDYDTRVDEERSQLHSRYYKTLPRYNKDSVLVMVSRAVQ 312
15 -68.5006EC3 Entity 1(prereleased)  ali follow..  20  232.ERTSAEVCDIVVVGRARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISRFTEHNYDVENEAPVLYRIHNLEKQDWAERELLFRPELAELAAAFVGSPVVPTAFALVLKEPKRAAGVPWHRDRANV---APHTVCNLSICLDTAGPENGCLEGVPGSHLLPDDIDVP---------------EIRDGGPRVPVPSKVGDVIVHDVRLVHGSGPNPSDQWRRTIVIEFANPAISLPSLPS........................... 465
16 -65.7004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  17  1...........LHMVPALTREQLYIFDTTGFLVIPGVFGSGEVESFRSELERLDTVD--------PGFPRTRRYPDLPAASPVFARLALDDRLLAPVRDVVNQPLRLLEGYGLRRTKDSLGDRQVGRDLSITHTYHDGKVKALVYLSDIQSPEDGSFCYVQGSHKANFPLLRERAERGENTSL-----VDSGFPTLSDVFVRSGDVLLLNEALMHGTRRKLTEGDRLLTAFGYGPTFFT................................. 233
17 -60.4005ybm_A mol:protein length:314 PrhA  ali model follow..  16  11.RGSHMPPRLQRFPATASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKRFSKCVIASPTFRNIIESDLMHELCDRVFSKPGEHFNDNMVIEVQPGAPAQRLHRDQELYPWAGPECVINFFCAVTPFTEENGATRLVPGSHLWPEFTQINERDC-----------PQFGKIETVPAIMQPGDCYLMSGKVIHGAGHNATTDRRRALALAIIRRELRPMQA............................. 253
18 -58.4005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  16  11.RGSHMPSRLQKFPATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKRFSKLVTTSPTFRHILENDLMHELLQRVFSKPGHFNDTMVIEVQPG-APAQRLHRDQELYPWDAPECLVNFFCAVTPFTVENGATRLVPGSNRWPELTLINATDC-----------PQYGKIDSVPAIMQPGDCYMMSGKVIHGAGHNATSDQRRALAFSTIRRELRPVQA............................. 253
19 -54.7004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  18  7MTSQHQEHTGKRFSIQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKPDHVARVHNLVDFSHCFRHEILNHELLHKICRTFEESGDYWLGYGAVIENGPGTEQKWHRDQPRYPLVKEGPMLNFFTALTDFDAETGKTQYILGSNKRVELGEPD------------------ADHPIEYVGLKPGDTTIVSGKITHRGSDNRSDKMRRAMPIMIIPSILTPFDA............................. 251
20 -53.0004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  17  4FTVDSKPQLQRLAADADV-DRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADPPHFKYVPNVATTCPTFRNVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAPFHRDDATHPLEAPPVSLSVIFPLTEFTEENGATEVILGSHRWTEVGTP-------------------ERDQAVLATMDPGDVLIVRQRVVHAGGGNRTGKPRRVVLAYFNSVQLTPFET............................. 238
21 -51.6005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  15  1MGSSSSGLVPRGSHMPPISDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHNRTIHMGDLVLTSKTYRDLLNLPFAHEVLEKVFKKDYWLNMGNILNMLPGAEAQ-RPHRDDYLYPVSQHMDMINITFPLNEFRHDNGGTLLLPKSHTGPNADFYA------------------NAEDLPAAEMQVGDALIFTGKCVHGGGANRSDKPRIGLALAAQPGYLTPRES............................. 248
22 -51.5005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  19  4ITETSKPTLRRIPRSAGD-EAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESLAGMRQLSSLPLFSKLFRDLMNDELLHGLCKRLFGPEYWLTTSSVLETEPGYHGQ-ELHREHDGIPIQSPESMLNFLTALTDFTAENGATRVLPGSHLWEDFS-----------------APPPKADTAIPAVMNPGDAVLFTGKTLHGAGKNNTDFLRRGFPLIMQSCQFTPVEA............................. 239
23 -48.0005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  15  1MMTSKDHVKSQIPSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHSTTTRLVNVLAPISKAYREDVLNSKVLHRICSDAFHDYWVLMGAVMELAPSNPAQ-PLHRDMRFSHPIAPATSINFLVALSPFTAENGATHVILGSHKWQN-------------------LSNVSMDATVRALMNPGDALLITDSTIHCGGAETTTETRRLLTITMGISQLTPLES............................. 241
24 -30.5004rgk_A mol:protein length:418 Uncharacterized protein  ali model follow..  13  56.KNPVPQLHADDIINGKVTEEQKAQIKQRGCCAILGVFPQEKATAWNREIGDYLDRNNFVERLKNAAEDNYFGTLAASKWSTPQVEARQDKRMQAVQIFLNNNRVVTYADRTRRRPPKSSSGLSPHVDGG-FAAEGRPEVFQGWTALTPQRTHAGTLNVIPIANAMAYILLRALQDDGRALSASEQWHPLLMEAISPIPDLEAGDTVFWHCDVIHSVENHNGEFDSNVMYIAAAPWC................................... 365
25 -29.9002csg_A mol:protein length:424 putative cytoplasmic protein  ali model follow..  14  61.QPVWPIIPFSELAMGNISDATRAEVKRRGCAVIKGHFPREQALAWDQSMLDYLDKNHFDEVYKGPGDNFFGTLSAS--WSQAQMQARQSEEMALAQSFLNRDISIIYPDRIRRRPPGTGALERWQYDP---TKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYILLRPLLDDVPELPISEQWHPLLMAALTSIPPLEAGDSVWWHCDVIHSVAPENQQGWGNVMYIPAAPMC................................... 371
26 -28.8002dbi_A mol:protein length:461 Hypothetical protein ybiU  ali model follow..  12  98.DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTLSAS--WSQAQMQARQSEEMANAQSFLNRDVSVIYPDRIRRRPPGTGALERWQYDP---TKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRPLLDDVPELPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPENQQGWGNVMYIPAAPMC................................... 408
27 -26.0006AKZ Entity 1(prereleased)  ali follow..  13  58.PSYVPKCDFIDIKDNKLPQQVSELFKQRGCLMIENVIDVDRIDIWFNELVEFCKTHPETAGYTFPNPTSWYNVFW----SKPQTEARFHPNMKAIFKAMSKDTQLVYGDRIRIREPGKAAALPLHLDSS-WEDIMYSEVLQGWLALSNNKSGEGTLRVLPSLKLS-ITPKFPGTVPGTGQLFLDKFYPHLHQGIISIPDVKKGSFVFWHCDLPHEVDRHNGNGHSSVLYYGQTPLS................................... 378
28 -21.9005iqs_A mol:protein length:315 WelO5  ali model follow..  16  19.MSNNTVSTKPALHFLDINATEVKKYPTADGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKGQSPDLKDYFASSAIFRQACRTMFQGEQVESIFHSLSGLPVEIPTGPATIRLLLEGREIAVHVGNDFKTLLDLSDQLSYFIPLT-VPEAGGELVVYSLEWN----QEASKYAQMQEYMDDVEFKIKSNQSQSVAYAPGPGDMLLFNGRYYHRVSEVIGNSPRRTIG.......................................... 292
29 -18.6003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  12  1.................MGSDKIENLYFQGLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNR--QGGETFGYHIDNAIRSTPDGMISATLFLSEPE-NYQGGELVI-------------------------------QDTYGQQSIKLSAGSLVLYPSSSLHQVTP-VLSGERTAAF.......................................... 184
30 -18.0002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  11  5.......QTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNP----NGDGRCVTCIYYLNKDAKVSGGILRIFPE----------------------------GKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNK----P........ 238
31 -17.9005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  13  3.....SEEALPSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMVDAVIRHCAGRLGSYKINGRTKAMVACYPGNGLGYVRHVDNP----HGDGRCITCIYYLNQDVKVHGGLLQIFPE----------------------------GRPVVANIEPLFDRLLIFDRRNPHEVKP--AYATRYAITVWYFDADER--ARAKDKYQLASGQKGVQVPVSQP........ 240
32 -17.7004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  9  1.....GSQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKAMVACYPGNGTGYVRHVDNP----NGDGRCVTCIYYLNKDAKVSGGILRIFPE----------------------------GKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADERARAKVKYLTGEKGLRVELNKPS........... 237
33 -17.6003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  10  1MQHTYPAQLMRAARAEHMTIAAAIHAADEADAIVMDIVPDGERDAWWDDEGFVTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRTTLFSDALDAKPLTIGHDYEVEFLLATRYEPFEAPFNFAPHCDDVSYGKRSFPRQLGGFLTIQG-ADNDAGMVMWD------RPESRAALDEMHAEYRETGAIAALERAAKIMLKPQPGQLTLFQSKNLHAIERCTSTRRTMGLFLIHTEDG................................... 268
34 -17.4002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  10  2..........ALPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKAMVACYPGNGTGYVRHVDNP----NGDGRCVTCIYYLNKDAKVSGGILRIFPE----------------------------GKAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAITVWYFDAD................................... 209
35 -17.3006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  13  27.TGLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSRNVSVNRIRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYPGSGLGYIRHIDNP----NRDGRCVTVLYYLNPNSQDCGGQLWLYPN----------------------------NENKVVKIDPIFDRLLLFDRRNPHEVKP--AYAMRYAITLWYFDEKERALSSQNGT......................... 251
36 -17.2002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  10  3HMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNP----NGDGRCVTCIYYLNKDAKVSGGILRIFPE----------------------------GKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADER................................. 222
37 -17.2005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  10  3HMASPNGQTKPLPALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLICHC-TKAMVACYPGNGTGYVRHVDNC----NGDGRCVTCIYYLNKDAKVSGGILRIFPE----------------------------GKAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAITVWYFDADER................................. 222
38 -17.1005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  10  3HMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMMDDLVLHCNGKLGSYKVNGRTKAMVACYPGNGTGYVRHVDNP----NGDGRCVTCIYYLNKDAKVSGGILRIFPE----------------------------GKAQFADIEPKFDRLLFFWSRNPHEVQP--AYATRYAITVWYFDADER................................. 222
39 -16.5004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  10  8LVPRGSHMASHISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRR-DAEGELNPAGVGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLFLGLEDFECHFALYPPGAFYRRHLDRF----DDDRRMVSAVLYLNEQPHDGGQLRMFL------------------------------ADGVEHDVEPVAGCLVVFLSEVPHEVLP--AGRERLSLTGWFRRRG................................... 219
40 -16.2002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  11  1.................MSLAQIKSLFATRLYHLSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREG------YPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKA------------------RLEDIWINILPEGGVHSGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGEG.................................. 210
41 -15.4003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  12  15.................................LSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENG------YPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGRA------------------ELEDLWINILPEGGSHSGTTYVSMPGGTSALKLEDPRHAMMMAAPARRKTARDELRQFIYVTPAVGDVLLWESWLRHEVPMNMSEDDRISVSFNYRWAE................................... 205
42 -14.4004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  9  12LYFQSMPERSDYEEQQLQKEEEARKV--KSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKEWVHQLVIQKLVEHRVI--NSAVINDYQPGGCIVSHVDPIH-----ERPIVSVSFFSDSA------LCF----------------------GCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRLDA.................................. 241
43 -13.6004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  10  1MSSGVDLGTENLYFQSMLEEDKIKGMFNPNWGTIHELVNDDLLRAVRKEIETEIH-RVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKGKLSGSKTDMSINTYTKGCHLLTHDDVI----SRRISFILYLPDPDRKSHYGGGLRLFPSILP-----------------------NVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ................................... 246
44 -13.4006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  11  25.......TRKEEWEKKYLHPEFLSHLQNF--VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYP---TQDTQLYEVGLDKQWHYVVFNYVAPFVRINLAFVVKYDMERQSELAPHHD---------SSTYTLNIALNEYGKEAGGCEF--------------------------------IRHKFIWQGQKVGYATIHAGKLYHRALP-ITSGKRYILVS......................................... 226
45 -12.9003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  10  1MKRKTAEVKGEKERNSKWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIH-RVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKGKLSGSKTDMSINTYTKGCHLLTHDDVI----SRRISFILYLPDPDRKSHYGGGLRLFPSILP-----------------------NVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ................................... 249
46 -12.4003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  10  3....EEDKIKGMFNPKIWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIH-RVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKGKLSGSKTDMSINTYTKGCHLLTHDDVI----SRRISFILYLPDPDRKSHYGGGLRLFPSILP-----------------------NVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ................................... 230
47 -12.3004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  13  95...................RTAYFVCDHDGSVELPNVLPKELVEEFTEKFESIQTGRKKDTGYSGNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYHRIRKPHKDNL-------DITPSSLFYFGNFQNTEGYLEL---------------------------------TDKNCKVFVQPGDVLFFKGNEYHVVAN--TSGWRIGLVY-FAHKGSKTKPYYEDTQKNSLKIHKETK............. 321
48 -12.2005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  11  1MGSSSSGLVPRGSHMEGFETSDRPGVCDGKYYEKDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQT---GEHEVIDKIQKKTREFLNSKKHCIFEDVQVARYKPGQYYYHHYDG---ACPKDQRLATLMVYLKAPEEGGGGETDFPTLK--------------------------------TKIKPKKGTSIFFYKETLHAGLPVKSGEK............................................... 211
49 -11.8004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  11  18............................SG-IKQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKDDIPDWVHELVIDRLVTHGNSAVINDYQPGGCIVSHVDPIH-----ERPIVSVSFFSDSA------LCF----------------------GCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRADA.................................. 220
50 -11.7004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  11  17...............................IRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKDEIPEWVHQLVIQKLVEHRNSAVINDYQPGGCIVSHVDPIH-----ERPIVSVSFFSDSA-----------------------------CFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRLDA.................................. 217
51 -11.3001e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  13  12.........................................DQTRLAPDLAYLAAVKHVPLWNASGDSEDRLYRDLKDAAAQPTAHVEHVPYLKEIVTTVFDGTHL----QMARSRNLKNAIVIPHRDFVEL-DREVDRYFRTFMVL---EDSPLAFHSNEDT----------------------------------VIHMRPGEIWFLDAATVHSA--NFSEISRQSLCVDFAFDG................................... 179
52 -11.2002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  13  10................EEWRGEVVHLSWSPRAFLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVI--SKIEKRVAQVTMIPLE-NHEGLQVLHYHDGQKYEPHYDYNAGPEHGGQRVVTMLMYLTTV--EEGGETVLPNAEQKVTGDGWSECAKRG-----------------LAVKPIKGDALMFYSLSLHGSCP..................................................... 205
53 -11.1002r6s_A mol:protein length:325 Gab protein  ali model follow..  12  1MNALTAVHNNAVDSGQDYSGFTLTPSAQSPRLLELT-FTEQTTKQFLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKTLLN-KLATAVAHLIGRSNF--VDNSDSYLRQPHRVMELHNDGTYVEEITDYVLM---MKIDEQNMQGGNSLLLHGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKILSVPVPVGKFLLINNFWLHGRDRPHPDLRRELMRQR........................................ 311
54 -11.0004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  12  22...................QLDQRRLTDD----LAVLAKSNFSSEYSDFACGRWEFCMLRNQSGKQEEQRVVVHETPALATPLGQSL---PYLNELLDNHFDRD-SIRYARIIRISE--NACIIPHRDYLEL----EGKFIRVHLVLD---TNEKCSNTEENN----------------------------------IFHMGRGEIWFLDASLPHSA--CFSPTPRLHLVVDIEGTR................................... 187
55 -10.7002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  10  1......................MQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGPIDPQTNKPWPAMPQSFHNLCQRAATAAGDACLINRYAPGAKLSLHQDK------------------DEPDLRAPIVSVSLGLPAIFQFGGLK------------------RNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGDCRYNLTFRQAGKKEN................................. 207
56 -10.7001jr7_A mol:protein length:311 HYPOTHETICAL 37.4 KDA PROTEIN IN ILEY-GABD INTERGENIC REGION  ali model follow..  9  66...............QPLLLKTLLNRAEGALLINAVGKQADEMVKLATAVAHLIG----------------------------------RSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLM---MKIDEQNMQGGNSLLLHGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKILSVPVPVGKFLLINNFWLHGRDRPHPDLRRELMRQRGYFAYAS................................. 304
57 -10.5003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  9  1..................GPHMLDLFADAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLSPIDPQTNKPWPAMPQSFHNLCQRAATAAGDACLINRYAPGAKLSLHQDK------------------DEPDLRAPIVSVSLGLPAIFQFGGLK------------------RNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGDCRYNLTFRQAGKK................................... 218
58 -10.3004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  12  6..................SGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEAS-------MAIMRRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDSI-----KFCGATIAGLSL--------------LSPS------------------VMRLVHTQEPGEWLELLLEPGSLYILRGSASHEILRDEESGRRISVICRSLPEGM.................................. 194
59 -10.3004m23_A mol:protein length:364 L-arginine beta-hydroxylase  ali model follow..  16  1MGSSSSGLVPRGSHMSNLTDQSTPSYS----------LTPAEASAVAELTLELAAAYGSFGDPVLLRDLPRLAARLPEGVQDFLREFKLADRLLMLYSALLGEPFGWATQQ--QLGMGSKQLLTWHTEDAFHPYRSDYLILGA--TIQRMIDERPLGPLLYGSRLDPYMRLDPYFTSDTDARRAYDALFKVVDSGMREVVADQGDVLFINHRAVHGRLPARYDGTDRWLKRVCVTSDLR................................. 343
60 -10.1005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  15  27................EDREIQIISKFEEPLIVVGNVLSDEECDELIELSKSKLARSKVGSSRDVNDIRT--------SSGAFLDDNELTAKIEKRISSIMNVPAS-HGEGLHILNYEVDQQYKAHYDY---RSAANNRISTLVMYLNDV--EEGGETFFPKLN--------------------------------LSVHPRKGMAVYFEYFTLHGGAP..................................................... 198
61 -9.9606daw_A mol:protein length:342 Non-heme iron hydroxylase  ali model follow..  12  62....................RRFRTAEEASCLVVRGLVDDRRLGPTPLDWREPPREPESEV----------------------------HEVFLTLATAHLGDDVLPVPSHENDQSGHGTVELAWHTEDGFHPLRNHDAVPTGVAGVDQVQDEPEPCAVLFGHPDRPYLRIDPAFMSDPEAAAALEALTAELQRNLTDVVLSPGDLLVINYRVVHGRAAARFDGTDRWLKKAVVTRDLRKSRAHRKSAAERVL................... 341
62 -9.7904nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  10  5...........................AAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGPIDPQTNKPWPAMPQSFHNLCQRAATAAGDACLINRYAPGAKLCLHQDK------------------IHPDLRAPIVSVSLGLPAIFQFGGLK------------------RNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGDCRYNLTFRQAGKK................................... 204
63 -9.7803qh6_A mol:protein length:157 CT296  ali model follow..  12  1...........SRMRAVLHLEHKRYFQNHGHILFEGLAPVSDCKQLEAELKLFLKEVA-----VVKDRHLQRWRENVHRTLPGVQMIVKRVRLDHLAAELTRSRVALVRDLWVQKQEEI---LFDDCD------------CSVLLCLSGEKAGWGL--FFSGEYPQDVFD...................................................................................................... 138
64 -9.5401drt_A mol:protein length:324 CLAVAMINATE SYNTHASE 1  ali model follow..  12  2..............TSVDCTAYGPELRAYAFLDAAHTAAASLPGALATALDTFNAEGSEDLRGLPVEADADLPTTPSSTPAPEDRSLLTMEAMLGLVGRRLGLDVYPSPGAHHLSSETSETLLEFHTEMAYHRLQPNYVML---ACSRADHERTAATLVASVRKALPLLDERTRAR-DPADKEAVAALSKALDEVTEAVYLEPGDLLIVNFRTTHARTPPRWDGKDRWLHRVYIRTD................................... 303
65 -9.3402iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  11  1MGSSSSGLVPRGSHMRVIDREGVYEISVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPTLKNRIEENTGHT---FNSLLCNLYRNEKDSVDWHSDDE--SLGRCPIIASLSF----------------GATRTFEMRKKPPPEENG----------DYTYVERVKIPLDHGTLLIMEGATQHRVPKEHSREPRVNLTFRTVYPD................................... 226
66 -9.3306alm_A mol:protein length:394 Alpha-ketoglutarate-dependent L-arginine hydroxylase  ali model follow..  8  106....................ARARLDAWPHALVVRGNVDDAALGSTPVHWRTARTPGSRP-----------------------------LSFLLMLYAGLLGDVFGWATQQ--LVSSSSRQELGWHTEDAFSPYRATTLAGVPLDDLDERTLDPEPVAILTGHRAAPHLRVDGDFSADEEAAAALGTLRKLIDASLYELVLDQGDVAFINRRAVHGRRAPRYDGRDRWLKRINITRDL.................................. 371
67 -9.2602xdv_A mol:protein length:442 MYC-INDUCED NUCLEAR ANTIGEN  ali model follow..  7  7.PSALNFDSPSSLFESLISPIKTETFFKEFW-YYGSLFKLTDLKSLCS--RGMYYGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPP-HYDDV-----------EVFI-----------LQ-LEGEKHWRLYHPTVPLAREY-----SVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNS.................................. 240
68 -9.2304nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  10  28VGKKGKKEVMAEFSDAVTEETLKKQVAEALHCVIPNFIQSQDFLEGLQ--KELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLE--TIDMSCAKYEFTDALLCHDDEL------EGRRIAFILYLVP-RSMGGTLDLYSIDEH------------------------FQPKQIVKSLIPSWNKLVFFSPVSFHQSEVLSEEKSRLSISGWFHGPS................................... 255
69 -9.2001vrb_A mol:protein length:342 Putative asparaginyl hydroxylase  ali model follow..  9  3.SDKIMSAVTESVLESIISPVTMSEFLEEYW--FTSIPGFEKVRTLENVLA-MVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDPQVRRWIEKLLRLPAGTSSKAIVYAAKN-GGGFKAHFD-----------------------AYTNLIFQIQGEKTWKLAKNENPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHST---KSDQATLALNITFGQPA................................... 249
70 -9.1903eat_X mol:protein length:293 Pyoverdine biosynthesis protein PvcB  ali model follow..  11  3MNAYLSDQPVRLSPLRDEQGNQPRF----GLLLEPGRPGMHVGELPAQWLKGLARSHH-----------LLLRGFAAFADAESLTRYC--HDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHC---VDAPGDSDGGRTTFSSTFPILRFCEPPVEGDASFINPSEFHYDGIAPEQRGELRWRSDDLVIADNLLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD......................... 293
71 -9.0502og5_A mol:protein length:357 Putative oxygenase  ali model follow..  7  62VEAARNAWHAWPATLRRDLAGFRRDSGPDGAIVLRGLVDSMGLPPTPRVNGSVQREAS------------------------------LGAAVLLMTACGLGDDVVPVPGMEEFQGNAGSTLLTFHNENAFHEHRPD------FVML-RADPTGRAGLRTACVRR--RVDLAATEPVTERAAEALRELQAHFDATAVTHRLLPGELAIVNRVTVHGRTEPRYDGTDRWLQRTFVLTDL.................................. 329
72 -9.0003lag_A mol:protein length:98 uncharacterized protein RPA4178  ali model follow..  13  10................................................................................................................................................IQIDNDEVRVTEWRLPPGSAT-----HTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVR-NESTAEIVFLEIELKAGS................................... 98
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.