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Query: 5flz_C mol:protein length:473 TUBULIN GAMMA CHAIN, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGGEIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSSTERDDDTKPFFRENCRNKFTPRAIMMDSEPSVIADVENTFRGFFDPRNTWVASDGASAGNSWANGYDIGTRNQDDILNKIDKEIDSTDNFEGFQLLHSVAGGTGSGLGSNLLEALCDRYPKKILTTYSVFPARSSEVVVQSYNTILALRRLIEDSDATVVFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFPSYMYSSMSSIYSTLIPSPELHFLSPSFTPFTSDYIHDDIAHKCHSSYDVMLDLLDPSNSLVSTAMNNPTYFNVYNTIIGNVEPRQISRAMTKLQQRIKFPSWSSSAMHVNIGRRSPYLPLQPNENEVSGMMLSNMSTVVNVFENACNTFDKVFAKGAFLNNYNVGDLFQSMQNVQDEFAESREVVQSLMEDYVAAEQDSYLDDVLVDDENMVGELEEDLDADGDHKLVLast
1 -131.0005flz_C mol:protein length:473 TUBULIN GAMMA CHAIN  ali model  100  1MGGEIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSSTERDDDTKPFFRENCRNKFTPRAIMMDSEPSVIADVENTFRGFFDPRNTWVASDGASAGNSWANGYDIGTRNQDDILNKIDKEIDSTDNFEGFQLLHSVAGGTGSGLGSNLLEALCDRYPKKILTTYSVFPARSSEVVVQSYNTILALRRLIEDSDATVVFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFPSYMYSSMSSIYSTLIPSPELHFLSPSFTPFTSDYIHDDIAHKCHSSYDVMLDLLDPSNSLVSTAMNNPTYFNVYNTIIGNVEPRQISRAMTKLQQRIKFPSWSSSAMHVNIGRRSPYLPLQPNENEVSGMMLSNMSTVVNVFENACNTFDKVFAKGAFLNNYNVGDLFQSMQNVQDEFAESREVVQSLMEDYVAAEQDSYLDDVLVDDENMVGELEEDLDADGDHKLV 473
2 -116.0003j8x_A mol:protein length:451 Tubulin alpha-1B chain  ali model follow..  27  2..RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL---SVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKIQFVDWCPTGFKVGINYQPPTPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE------GEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEE.................. 450
3 -115.0001z2b_A mol:protein length:448 Tubulin alpha chain  ali model follow..  27  2..RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL---SVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKIQFVDWCPTGFKVGINYQPPTPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE------GEFSEAREDMAALEKDYEEVGIDSYEDEDEGEE.................... 448
4 -115.0003du7_A mol:protein length:449 Tubulin alpha-1C chain  ali model follow..  27  2..RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLS---VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKIQFVDWCPTGFKVGINYQPPTPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE------GEFSEAREDMAALEKDYEEVGADSYEDEDEGEE.................... 448
5 -115.0002xrp_B mol:protein length:452 TUBULIN ALPHA-1D CHAIN  ali model follow..  27  2..RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLS---VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKIQFVDWCPTGFKVGINYEPPTPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE------GEFSEAREDMAALEKDYEEVGVDSVEGEGEEEEGEE................. 451
6 -114.0005Z4P Entity 3(prereleased)  ali follow..  28  2..RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL---SVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKIQFVDWCPTGFKVGINYQPPTPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE------GEFSEAREDMAALEKDYEEVGVDS............................. 439
7 -114.0005mlv_E mol:protein length:455 Tubulin alpha-1 chain  ali model follow..  27  2..REVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSENSYLNDGFGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVYPAQVSTSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDICRRNLDIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNS---VQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRIQFVDWCPTGFKIGICYEPPQPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEE------GEFSEAREDLAALERDYEEVGQDSMDNEMYEADEE.................. 454
8 -113.0005ubq_C mol:protein length:441 Tubulin alpha chain  ali model follow..  28  2..REVISIHVGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQL---SVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKIQFVDWCPTGFKVGINYQPPTPGGDLAKVMRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEE------GEFSEAREDLAALEKDYEEVGIET............................. 439
9 -113.0004ffb_A mol:protein length:447 Tubulin alpha-1 chain  ali model follow..  28  2..REVISINVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVLDRIRKLADQCDGLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKKSKLEFAVYPAQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDMCKRNLDIPRPSFANLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYSPVLSKSKAFHESN---SVSEITNACFEPGNQMVKCDPRDGKYMATCLLYRGDVVTRDVQRAVEQVKNKVQLVDWCPTGFKIGICYEPPTPNSQLATVDRAVCMLSNTTSIAEAWKRIDRKFDLMYAKRAFVHWYVGEGMEE------GEFTEAREDLAALERDYIEVGADSYAEEEE....................... 446
10 -113.0003cb2_A mol:protein length:475 tubulin gamma-1 chain  ali model follow..  36  1MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEG--TDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEGGGAGNNWASGFSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRKLANFIPWGPASIQVALSRKSPY---LPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKD---NFDEMDTSREIVQQLIDEYHAATRPDYISWGTQEQVDVDGGQKLISEED...... 465
11 -112.0005mlv_I mol:protein length:448 Tubulin beta chain  ali model follow..  26  2..REIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQ--HERLNVYFNEAAGGKYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSDTVVEPYNATLSMHQLVENSDETFCIDNEALSSIFANTLKIKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVS---VPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKAYFVEWIPDNVLKAVCSVPP------KDLKMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLVSEYQQYQEAGIDEGDEDYEIEEEKEPLE........... 447
12 -112.0001z2b_B mol:protein length:445 Tubulin beta chain  ali model follow..  26  2..REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQ--LERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL---TVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEW----IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDEA............. 445
13 -111.0006e88_A mol:protein length:434 Tubulin alpha-2 chain  ali model follow..  26  2..REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNE--GESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEAL---SVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKIQFVDWCPTGFKVGINYQPPTPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE------GEFTEAREDLAALEKDYEEVG................................ 434
14 -111.0005ubq_D mol:protein length:429 Tubulin beta chain  ali model follow..  25  2..REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRAL---TVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEW----IPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLVSEYQQYQDAT............................. 429
15 -111.0005Z4P Entity 4(prereleased)  ali follow..  26  2..REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQ--LERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT---VPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEW----IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLVSEYQQYQDATAD........................... 431
16 -111.0003ryc_B mol:protein length:445 Tubulin beta chain  ali model follow..  26  2..REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQ--LERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT---VPELTQQMFDSKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMLNIQNKNSSYFVEW----IPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDEA............. 445
17 -111.0006e88_B mol:protein length:426 Tubulin beta-2 chain  ali model follow..  26  2..REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQ--LERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALT---VAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEW----IPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLISEYQQYQ................................ 426
18 -111.0005n5n_B mol:protein length:426 Tubulin beta chain  ali model follow..  26  2..REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT---VPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEW----IPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLVSEYQQYQ................................ 426
19 -111.0005ij0_B mol:protein length:426 Tubulin beta-3 chain  ali model follow..  26  2..REIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQ--LERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRAL---TVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEW----IPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLVSEYQQYQ................................ 426
20 -110.0001ffx_B mol:protein length:445 PROTEIN (TUBULIN)  ali model follow..  26  2..REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQ--LERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT---VPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEW----IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE------MEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEGEEDEA............. 445
21 -110.0004ffb_B mol:protein length:463 Tubulin beta chain  ali model follow..  24  2..REIIHISTGQCGNQIGAAFWETICGEHGLDFNGTYHGHDDIQ--KERLNVYFNEASSGKWVPRSINVDLEPGTIDAVRNSAIGNLFRPDNYIFGQSSAGNVWAKGHYTEGAELVDSVMDVIRREAEGCDSLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVLPSPKSDTRVEPYNATLSVHQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLVSSVMSGVTTSLRYPGQLNSDLRKLAVNLVPFPRLHFFMVGYAPLTAIGSQSFRSLT---VPELTQQMFDAKNMMAAADPRNGRYLTVAAFFRGKVSVKEVEDEMHKVQSKNSDYFVEW----IPNNVQTAVCSVAPQGLDMAATFIANSTSIQELFKRVGDQFSAMFKRKAFLHWYTSEGMDE------LEFSEAESNMNDLVSEYQQYQEATVEDDEEVDENGDFGAPQNQDEPITEN... 455
22 -110.0002btq_B mol:protein length:426 TUBULIN BTUBB  ali model follow..  28  2..REILSIHVGQCGNQIADSFWRLALREHGLTEAGTLK-EGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGGDMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVVPSLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKL-NRSPNYMDLNNIIALIVSSVTASLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRT---NFPDLARETFAQDNFTAAIDWQQGVYLAASALFRGDVKAKDVDENMATIRKSLNYASYMP----ASGGLKLGYAETAPEGFASSGLALVNHTGIAAVFERLIAQFDIMFDNHAYTHWYENAGVSR------DMMAKARNQIATLAQSYRDAS................................ 426
23 -109.0005w3j_B mol:protein length:457 Tubulin beta chain  ali model follow..  25  2..REIIHISTGQCGNQIGAKFWEVICDEHGLDFNGTYHGHDDIQ--KERLNVYFNEASSGKWVPRSINVDLEPGTIDAVRNSAIGNLFRPDNYIFGQSSAGNVWAKGHYTEGAELVDSVMDVIRREAEGCDSLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVLPSPKSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNHLVSSVMSGVTTSLRYPGQLNSDLRKLAVNLVPFPRLHFFMVGFAPLTAIGSQSFRSL---TVPELTQQMFDAKNMMAAADPRNGRYLTVAAFFRGKVSVKEVEDEMHKVQSKNSDYFVEW----IPNNVQTAVCSVAPQGLDMAATFIANSTSIQELFKRVGDQFSAMFKRKAFLHWYTSEGMDE------LEFSEAESNMNDLVSEYQQYQEATVEDDEEVDENGDFGAPQNQDEPITEN... 455
24 -107.0002bto_A mol:protein length:473 TUBULIN BTUBA  ali model follow..  23  4..NNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAPGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKATSG-SLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITASMRFSGFLTVEISELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEEL---GIEEMIKSLFDNGSVFAACSPMEGRFLSTAVLYRGIMEDKPLADAALAAREKLPLTYWIPTAFKIGYVEQPGI------SHRKSMVLLANNTEIARVLDRICHNFDKLWQRKAFANWYLNEGMSE------EQINVLRASAQELVQSYQVAEESGAKAKVQDSAGDTGMRAAAAGVSDDARG.. 461
25 -106.0005nd4_A mol:protein length:412 Tubulin alpha chain  ali model follow..  28  1..RECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------------------------HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQL---SVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKIQFVDWCPTGFKVGINYEPPTPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE------GEFSEAREDMAALEKDYEEVGVDS............................. 412
26 -27.7003zid_A mol:protein length:373 TUBULIN/FTSZ, GTPASE  ali model follow..  17  3...NVLMLGVGQCGNRILDAVNRQ--------------------AFGGSRLAKYYSKQRFPSRVETIAINTAINDLKELKFTAA----KDRLHVPNLHGVGAN------SKGKQGFWENQEMILEEIEKRGDFDLIFVMTSVSGGTGSSFSPLMIHELKKRYKNATIVPIAVLPFRE-EGTIYLQNAAFCLREMIEEADGMILVDNQYLKRFSGDI----ASAYDRINTMVAQRLLFLIEALDSEMLSVTDLGDFKTVM-----------NGGLRMGTLGYYQADKKSPSIRAAIKNSLREVGLLYPANVDAGEAGRAMIVIQGSLNVDEITKEIESLTETIGHVFK--------------IVIKKGEPRVLSVLSLERAPGLVELYEKAKWAIQEERERKD---------------RARSELYEAFEQINDLEEIY.................................... 367
27 -22.9003v3t_A mol:protein length:360 Cell division GTPase FtsZ, diverged  ali model follow..  16  3MKNKIVFAPIGQGGGNIVDTLLGI----------------------------------------NALFINTSKKDLDSLKH-------KHTYHIPYAEGCGKERKKA-VGYAQTYYKQIIAQIMEKFSSCDIV---IFVATMAGGAGSGITPPILGLAKQMYPNKHFGFVGVLPKAT-EDIDEHMNAIACWNDIMRSTNSIYLLDNN------------KREKESDINKEFATLFNDFMNMSESHAEGVVDEDEISKLL...................................................................................................................................................................................................................... 207
28 -22.3003m89_A mol:protein length:427 FtsZ/tubulin-related protein  ali model follow..  9  38...RWGVIGAGQKGNKEADLFAGY-------------------------------KFSNGTTCYPTLAVNFAESDMMHLQNIIKEDRI----HFDGLKGAARTPSVVT-PETNPNANGYLDKLAQELGR-VIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGDPDEINNALVLLSEIDEFMKPLANVIVNDNTQMQRIIESQKNRYVNWKEVANDNVVSTLHEIIPENYGSDNVTYDPSDLIKLL----------SIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTENRIRNTLG-------EYKRLDEIAGKFGDPIWDNEYAVCYTIFAGMTMPKRYISLAREGKELAEK......................................................................... 412
29 -22.3002xkb_A mol:protein length:427 FTSZ/TUBULIN-RELATED PROTEIN  ali model follow..  9  24...RWGVIGAGQKGNKEADLFAGY-------------------------------KFSNGTTCYPTLAVNFAESDMMHLQNIIKEDRI----HFDGLKGAARTPSVVT-PETNPNANGYLDKLAQELGR-VIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGDPDEINNALVLLSEIDEFMKPLANVIVNDNTQMQRIIESQKGTKDNWKEVANDNVVSTLHEIIPENYGSDNVTYDPSDLIKLL----------SIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTENRIRNTLG-------EYKRLDEIAGKFGDPIWDNEYAVCYTIFAGMTMPKRYISLAREGKELAEKQE....................................................................... 400
30 -21.3003j4t_F mol:protein length:490 FtsZ/tubulin-related protein  ali model follow..  8  30...RWGVIGAGQKGNKEADLFAGY-------------------------------KFSNGTTCYPTLAVNFAESDMMHLQNIIKEDRI----HFDGLKGAARTPSVVT-PETNPNANGYLDKLAQELGR-VIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGDPDEINNALVLLSEIDEFMKPLANVIVNDNTQMQRIIESQKGTKDLKKEVANDNVVSTLHEIIPENYGSDNVTYDPSDLIKLL----------SIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTENRIRNTLG-------EYKRLDEIAGKFGDPIWDNEYAVCYTIFAGMTMPKRYISLAREGKELAEKQEQLRAEAQRKQDEEKVDISFATNRVQKNTFNPYNKNQGFGGASRFSGGKNSAFKRQTSEATSTQNQQEEENI 477
31 -21.2004b46_A mol:protein length:395 CELL DIVISION PROTEIN FTSZ  ali model follow..  16  2...KLAMIGFGQAGGKVVDKFVE------------------------------YDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQSRVKGHGVGAD------ELGAEIAEEDIDEVQGAIDSVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIYTEP-VYGLGILPGSD-EGGIYTLNAARSFQTFVREVDNLLVFDNDAWRKTGESV----QGGYDEINEEIVNRFGVLFGAGQEVAESVVDSSEIINTL...................................................................................................................................................................................................................... 223
32 -20.9004b45_A mol:protein length:349 CELL DIVISION PROTEIN FTSZ  ali model follow..  15  2...KTVLIGVGQAGGKLASALQSF------------------------------DRQTGFGAVLDAVAVNTAKADLQSL---------PVETVLIGQDRVNGHGVGGDNELGAAVMESDQTEVMSALDG-AEAESIFVVAGLGGGSGSGGAPVLAKALAGVY-DVPVYVLGILPGAD-EGALYQVNAGRSLKTVAREADAVLLVDNDAFRSAGESM----SEGYDAINEAIARRVGLLLAATEGVGESVVDTSEVINTL...................................................................................................................................................................................................................... 217
33 -20.0004ei7_A mol:protein length:389 Plasmid replication protein RepX  ali model follow..  17  17...KFGFLGLGMGGCAIAAECANK------------------------------TQIKNNKYPYRAILVNTNSQDFNKIEIKNTGNV-RKIQLEGYEQGAARNPQVG-EEAFVKHETKIFEAVKQEFEDRDFI---WITCGLGGGTGTGALLKAIEMLYEH--DYNFGLLLTLPAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANTSYSNKYIADALNLVTSSFTPFSDTHFDASEFAQVI...................................................................................................................................................................................................................... 243
34 -18.7003zbp_A mol:protein length:333 PHIKZ039  ali model follow..  11  6...KTRIYFCGGAGFRIGELFHGY----------------------------------------DVCYIDTSVQNKHKHNTDDNTIIIEADTARKRAIGMGKD------KAAAELISAHIPAIAHHFPAGDTN---IVVYSMGGASGSTIGPSLVSHLQQQ--GEVVVSVVIGSYDSDISLRNSSGSLKTFEGVSSVSKIINYHENV------------EGIPQSMVNQNILEVLNALVILFN-QEHQSLDLMDITNWA...................................................................................................................................................................................................................... 209
35 -15.7003j5v_a mol:protein length:320 PhuZ201 subunit  ali model follow..  17  9...KVCLIFAGGTGMNVATKLVDL----------------------------------------AVHCFDTCDKNVVDVHRS------VNVTLTKGTRGAGGN------KVILPLVRPQIPALMDTIPEADFY---IVCYSLGGGSGSVLGPLITGQLADR--KASFVSFVVGAMESTDNLGNDIDTMKTLEAIAVNKHLPIVVNYVP---------NTQGRSYESINDEIAEKIRKVVLLVN-QNHGRLDVHDVANWV...................................................................................................................................................................................................................... 200
36 -13.4004e6e_A mol:protein length:314 Cell division protein ftsZ  ali model follow..  15  11...VIKVVGIGGGGVNAVNRMIEEGLKG-----------------------------------VEFIAINTDAQALLMSDA--------DVKLDVGRELTRGLGAGANPDVGRKAAEDHREEIEEVLKGADMV---FVTAGEGGGTGTGGAPVVANIARSL--GALTIGVVTRPFS--EGKRRATQAEAGIAMLREEVDTLIVIPNDRLLSISDRQVSVLD-AFKAADQVLLSGVQGITDLITTPGLINLDFADVKSVM...................................................................................................................................................................................................................... 216
37 -13.3003wgj_A mol:protein length:308 Cell division protein FtsZ  ali model follow..  12  5...TLKVIGVGGGGNNAVNRMIDHGMNN-----------------------------------VEFIAINTDGQALNLSKA--------ESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMV---FVTSGMGGGTGTGAAPVVAKIAKEM--GALTVGVVTRPFS--EGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGISDLIATPGLINLDFADVKTIM...................................................................................................................................................................................................................... 210
38 -13.2002r6r_1 mol:protein length:338 Cell division protein ftsZ  ali model follow..  15  9...KIKVIGVGGGGSNAVNRMYEDGIEG-----------------------------------VELYAINTDVQHLSTLKVPNKIQI---GEKVTRGLGAGAK------EVGEEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPVIAKTAKEM--GILTVAVATLPFR--EGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIKD-AFKEVDSVLSKAVRGITSIVVTPAVINVDFADVRTTL...................................................................................................................................................................................................................... 214
39 -13.2002rhh_A mol:protein length:325 Cell Division Protein ftsZ  ali model follow..  12  3...SIKVIGVGGGGNNAVNRMIENEVQG-----------------------------------VEYIAVNTDAQALNLSKAEVKMQI---GAKLTRGLGAGAN------EVGKKAAEESKEQIEEALKGADMV---FVTAGMGGGTGTGAAPVIAQIAKDL--GALTVGVVTRPFT--EGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLE-AFREADNVLRQGVQGISDLIATPGLINLDFADVKTIM...................................................................................................................................................................................................................... 208
40 -12.7001fsz_A mol:protein length:372 FTSZ  ali model follow..  15  39...KITVVGCGGAGNNTITRLKMEGIEG-----------------------------------AKTVAINTDAQQLIRTKA--------DKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKKI--GALTVAVVTLPFV--EGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVPNM----KLAFKVADEVLINAVKGLVELITKDGLINVDFADVKAVM...................................................................................................................................................................................................................... 243
41 -12.3001w5f_A mol:protein length:353 CELL DIVISION PROTEIN FTSZ  ali model follow..  12  23...KIKVIGVGGAGNNAINRMIEIGIHG-----------------------------------VEFVAVNTDLQVLEASNADVKIQI---GENITRGLGAGGR------EIGEQAALESEEKIREVLQDTHMV---FITAGFGGGTGTGASPVIAKIAKEM--GILTVAIVTTPFY--EGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIKD-AFLKADETLHQGVKGISELITKRGYIRLTSRFARIESV..................................................................................................................................................................................................................... 229
42 -12.1001rlu_A mol:protein length:382 Cell division protein ftsZ  ali model follow..  13  13...VIKVVGIGGGGVNAVNRMIEQGLKG-----------------------------------VEFIAINTDAQALLMSDADVKLDV---GRDSTRGLGAGAD------EVGRKAAEDAKDEIEELLRGADMV---FVTAGEGGGTGTGGAPVVASIARKL--GALTVGVVTRPFS--EGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLMD-AFRSADEVLLNGVQGITDLITTPGLINVDFADVKGIM...................................................................................................................................................................................................................... 218
43 -11.9002vaw_A mol:protein length:394 CELL DIVISION PROTEIN FTSZ  ali model follow..  14  13...VIKVIGVGGGGGNAVNHMAKNNVEG-----------------------------------VEFICANTDAQALKNIAARTVLQL---GPGVTKGLGAGAN------EVGRQAALEDRERISEVLEGADMV---FITTGMGGGTGTGAAPIIAEVAKEM--GILTVAVVTRPFP--EGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLA-AFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVM...................................................................................................................................................................................................................... 218
44 -11.7002vam_A mol:protein length:382 CELL DIVISION PROTEIN FTSZ  ali model follow..  12  13...SIKVIGVGGGGNNAVNRMIENEVQG-----------------------------------VEYIAVNTDAQALNLSKAEVKMQI---GAKLTRGLGAGAN------EVGKKAAEESKEQIEEALKGADMV---FVTAGMGGGTGTGAAPVIAQIAKDL--GALTVGVVTRPFT--EGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLE-AFREADNVLRQGVQGISDLIATPGLINLDFADVKTIM...................................................................................................................................................................................................................... 218
45 -11.5004dxd_A mol:protein length:396 Cell division protein FtsZ  ali model follow..  12  13...TLKVIGVGGGGNNAVNRMIDHGMNN-----------------------------------VEFIAINTDGQALNLSKAESKIQI---GEKLTRGLGAGAN------EIGKKAAEESREQIEDAIQGADMV---FVTSGMGGGTGTGAAPVVAKIAKEM--GALTVGVVTRPFS--EGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIM...................................................................................................................................................................................................................... 218
46 -11.5004m8i_A mol:protein length:400 Cell division protein FtsZ  ali model follow..  12  13...TLKVIGVGGGGNNAVNRMIDHGMNN-----------------------------------VEFIAINTDGQALNLSKAESKIQI---GEKLTRGLGAGAN------EIGKKAAEESREQIEDAIQGADMV---FVTAGMGGGTGTGAAPVVAKIAKEM--GALTVGVVTRPFG--EGRKRQTQAAAGVESMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIM...................................................................................................................................................................................................................... 218
47 -10.5003wgk_A mol:protein length:390 Cell division protein FtsZ  ali model follow..  13  15...TLKVIGVGGGGNNAVNRMIDHGMNN-----------------------------------VEFIAINTDGQALNLSKAESKIQI---GEKLTRGLGAGAN------EIGKKAAEESREQIEDAIQGADMV---FVTSGMGGGTGTGAAPVVAKIAKEM--GALTVGVVTRPFS--EGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGISDLIAVGAGLDADVKTIMSN....................................................................................................................................................................................................................... 220
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.