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Query: 5l9v_A mol:protein length:252 Egl nine homolog 1, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSHMASPNGQTKPLPALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNCNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERAAAKVKYLTGEKGVRVELNKPSDSVGKDVFLast
1 -107.0005l9v_A mol:protein length:252 Egl nine homolog 1  ali model  100  1GSHMASPNGQTKPLPALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNCNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERAAAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
2 -103.0005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  97  1GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
3 -101.0002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  98  1GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
4 -100.0002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  97  1...........MALPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 241
5 -99.1002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  98  2......PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKP......... 238
6 -98.7004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  97  2........SQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGLRVELNKPSD....... 238
7 -92.9005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  63  3.......SEEALPSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDADERARAKDKYQLASGQKGVQVPVSQ........ 239
8 -89.3006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  48  25.DKTGLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVS--VNRIRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYPGSGLGYIRHIDNPNRDGRCVTVLYYLNPNWNSQDCGGQLWLYPNNENKVVKIDPIFDRLLLFWSDRRNPHEVKPAYAMRYAITLWYFDEKERALSSQNGT...................... 251
9 -77.3004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  20  6SGLVPRGSHMASHISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATEVRETIRGDQIQWIDPGQAEA-----CDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRFRDDRRMVSAVLYLNEGWQPHDGGQLRMFLAD--GVEHDVEPVAGCLVVFLSGE-VPHEVLPAGRERLSLTGWFRRRGNDP............................. 222
10 -52.2003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  11  36................DKTFQDGLKKEIQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 273
11 -52.0004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  11  33................DKTFQDGLKKEIQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVEEVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 270
12 -51.5003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  11  17................DKTFQDGLKKEIQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 254
13 -49.9004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  17  59..............RRTPFSHEVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTL--RKILFEDFRSWLSDISKIDLE------------STIDMSCAKYEFTDALLCHDDELEG--RRIAFILYLVPPWDRSMGGTLDLYSIDEHQIVKSLIPSWNKLVFFEVSPVSFHEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHE......... 278
14 -32.4005iqs_A mol:protein length:315 WelO5  ali model follow..  12  36............NATEVKKYPTAIQDIIRSFDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIYGHAIVGQSPDLKDRTMFQGSPDFEEQVESIFHSLSGLPVEIPTGTPATIRLLLEGREIAVHVGTLLDLSDQLSYFIPLT---VPEAGGELVVYSLENQSQSVAYAPGPGDMLLFNGGR-YYHRVSEVNSPRRTIGGFLAFSKQRD............................. 302
15 -32.1003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  9  16.............ARAEHMTIAAAIHALDDEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVAGQLQREQGDKLVSKAAEYFGIACRVNDGLRTTRFVRLFSDALDAKPLTIGHATRRVYEPFEAPFNFAPHCDLKRSFPRQLGGFLTIQ---GADNDAGMVMWDNRPESAKIMLKPQPGQLTLFQSK--NLHAIERCTSTRRTMGLFLIHTEDGW............................. 269
16 -31.3005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  17  33.................................EKIDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGE------HEVIDKIQKKTREFLNSKKHCIDKYNFEDVQVARYKPGQYYYHHYDACPKDQRLATLMVYLK---APEEGGGGETDFPTLK---TKIKPKKGTSIFFWVYKETLHAGLPVKSEKIIANQWIRAVK................................ 222
17 -30.7003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  9  4.....................DKIENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQLDKDD--------------PVAVALGQQIMDRLLAHPQSAALPLQFYPPLFNRYQGGETFGYHIDNAGMIRTDLSATLFLSEP-ENYQGGELVIQDTYGQ---QSIKLSAGSLVLYPSS--SLHQVTPVLSERTAAFMWLQSMVRDEGQRRLLFQLDQSIQSLTAQTAA....... 216
18 -25.4006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  8  40.............LSHLQNFKDFDYTEICND--VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQL------YEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDINLAFVVKYERQSELAPHHDS--STYTLNIALNEYGKEYT---AGGCEFIRHKF----IWQGQKVGYATIHAGKLLAYHRALPITSKRYILVSFV.................................... 228
19 -25.0002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  18  26.................................FLLKNFLSDEECDYIVEKARPKMVKSSVVDN---ESGKSVDSEIRTSTGTWFAKGED---------SVISKIEKRVAQVTMIPLENHEGLQ--VLHYHDGQKYEPHYDPEHGGQRVVTMLMYLT---TVEEGGETVL--SECAKRGLAVKPIKGDALMFYSDPASLHGSCPTLKDKWSATKWIHVAP................................ 222
20 -24.8005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  14  43.................................VVLGNVLSDEECDELIELSKSKLARSKVG-------SSRDVNDIRTSSGAFLDDN-----------ELTAKIEKRISSIMNVPASHGEGLH--ILNYEVDQQYKAHYDRSAANNRISTLVMYLN---DVEEGGETFF-----PKLNLSVHPRKGMAVYFEYNELTLHGGAPVTKEKWIATQWVRRGT................................ 215
21 -22.6004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  9  1GPEFTVDSKPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIP-------PPKGERLLADKYPPHFKYVPNVATTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAQPFHRDDLEAPPVSLSVIFPLTE---TEENGATEVIGTPERDQAVLATMDPGDVLIVRQR--VVHNRTTAGKPRRVVLAYFNSV--------TPFETYRTMPREMVESMTVLGQRML 258
22 -22.4004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  11  1.............MTTATLDRAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLHREELAQLAAAFVDGPVVPTAY-ALVLKEPYRAAEVPWHRDRVNGPRTVCNLSICLDD--AGPHNGCLEAVPGSATGPVVPVPVSQGDVVVH--DVRLVHGSGPNGSWRRTIVIEYADPAAP.............................. 220
23 -21.8005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  9  1GPTITETSKPTLRRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQW--------ELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMNDELLHGLCKRLFGPESGDYWLTTSSVLETEPGYGQELHREHRQSPESMLNFLTALT-DFTAENGATRVL-PPPKADTAIPAVMNPGDAVLFTGK--TLHG-NTTDFLRRGFPLIMQSC--------TPVEASVALPRELVETMTPLAQKMV 259
24 -20.9005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  9  2.MTSKDHVKSQIPRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLST-TTRLVNVLAPISKAYREDVLNSKVLHRICSDAFHVYGDYWV---LMGAVMELAPSNPAQPLHRDMPDAPATSINFLVALS-PFTAENGATHVI-SNVSMDATVRALMNPGDALLITDS--TIHC-TTGTETRRLLTITMGIS--------TPLESNLAVPRPVIESLTPLAQRLL 261
25 -20.8004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  11  5.GSMTSQHQEHTGTKRIQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPDREQLKFKADKKDDPHFWLADFIPDHVARVHNLVDFSHCFRHEILNHELLHKICRLTFEESGDYWLGYGAVIENGPGTTEQKWHRDQPDAPEGMLNFFTALTD---DAETGKTQYIEPDADHPIEYVGLKPGDTTIVSGK--ITHRGSDSDKMRRAMPIMIIPS--------TPFDATCHLSRELVETMTPLAQKMI 271
26 -20.6005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  8  12....GSHMPSRLQKFPATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEK---------IQVQVTNDGNSNDRVKRFSKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGMGNDTMVIEVQPGAPAQRLHRDQPDAPECLVNFFCAVTP---TVENGATRLVPQYGKIDSVPAIMQPGDCYMMSGK--VIHG-ATLSDQRRALAFST------RRELRPVQAFPLWIPMQIATELSPRTQAMF 274
27 -20.3003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  10  15...................................LSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYASLTDLPWRFPI--------FADLVKSLDAHVAAFAEDLEFDLDGRALELEDLPEGGSHASHIHPHS-----ISGTTYVS---MPGGTSALKLEDPRHLRQFIYVTPAVGDVLLWES--WLRHEVPMSEDDRISVS....................................... 198
28 -20.2003nnf_A mol:protein length:344 CurA  ali model follow..  11  4GVDLGTENLYFQSNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGK--------------HNALFSVEPNHKGLPWHVGVGKTEDFGASIWIPLDK--TKEHRGGMQYVTIKDGYEEDEYNL--GDAFFF--NKYVLHQSVPLHKLRRAFVIRLVDYDTR.............................. 272
29 -20.1005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  10  6.SGLVPRGSHMPPIRRASQGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNLPFAHEVLEKVFKKDSGDYWLNMGN---ILNMLPGAEAQRPHRDDATSPDLMINITFPLN-EFRHDNGGTLLL-FYANAEDLPAAEMQVGDALIFTGK--CVHGGGASDKPRIGLALAAQPG--------TPRESNVNVPRDIVETMTPLAQRMI 268
30 -20.0005ybm_A mol:protein length:314 PrhA  ali model follow..  11  9.VPRGSHMPPRLQRFPATASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEKIP------VEVTNNGNSNDRTKRFSKCVIASPTFRNEIIESDLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPAQRLHRDQEAGPECVINFFCAVTP---TEENGATRLVPGSGKIETVPAIMQPGDCYLMSGK--VIHG-ATTTDRRRALALAI------RRELRPMQAFSLSVPMKLAREMSERSQTMF 274
31 -20.0004xab_A mol:protein length:252 EvdO2  ali model follow..  9  1..........MDAMEVVGTIDHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKYVPELLDSPARCRSIASAFLDMAEEELEFYG--HAILKPPRYGAPTPWHQDDPRWRRRGLSIWTTLDE--ATVESGCLHYLPGGHRTSAVACPLAPGGAVVH--DFRTPHYAGPTDQPRRAYVLVFMSAPAEVADPEPRPWMDWG................. 252
32 -20.0004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  10  1.............LHMVPALTREQLYIFDTTGFLVIPGVFGSGEVESFRSELERLDTVRTRRYPDLPAASPVFARLALDDRLLAPVRDVVNQPL---RLLEGYGLRRTKDSVLYLHGGNSELLDLGDRQVGRDLSITHTYHDGKLYCPYVKALVYLSDIQSPEDGSFCYV-VDSGFPTLSDVFVRSGDVLLL--NEALMHGTRRTEGDRLLTAFGYGPTFFTEWRELDAETADLRGAGYVD--HDVEEDFVL 261
33 -20.0002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  13  1GSHMTNVTGDYTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMRELVALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFGPNQDFRTFWIPLIR---TRESGGVALADGSHREHLLHSPMEPGDILLF--HAHMCHKSIPNLSKRMSMDTRVQPAKSH.............................. 256
34 -19.7002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  10  19...................................LSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYAS---------TDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDLPEGGVHGSHIHPHS-----ISGTTYVA---MPEGTSALKLEDPRLPRTFRSVAPKVGDVLLWES--WLRHEVPMAEEDRISVS....................................... 202
35 -18.8004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  10  27...........SEWTNDAPISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQSNEIRSIFEIHAQSPVMARLAADARLADVARFLLG--------DEVYIHQSRLNYKPGFKGREFYWHSDDGMPRMRALSMSVLLAE--NTPHNGPLMVIPGSHRHGIVAPTGKPGTVILFDC--NLMHGSNGTPFPRANAFLVYNAVSN............................... 270
36 -18.3004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  10  101...........................CDHDGSVELPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLYPSTAFNSLKPSNDGHRIRKPHKDN---LDITPSSLFYFGN---QNTEGYLELTD----NCKVFVQP--GDVLFFKGNEYK-HVVANTSGWRIGLVYFAHKGSKTKPYYEDTQKNSLKIHKETK........... 321
37 -18.2003emr_A mol:protein length:310 EctD  ali model follow..  10  27...........RSKDNQAPITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLLG--------SDVYVHQSRINYKPGFKGKEFDWHSDDGMPRMRAISVSIALSD--NYSFNGPLMLIPGSHNGGISVPTGKAGSVTLFES--NTMHGSTSTPYPRNNLFMVYNSVKN............................... 271
38 -18.2005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  12  6DQETEPGVPADLPAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLA----HEESVRWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENKEK-----DASVPTAPHHDAFSTAGTALTAWVALVD---PVERGCMTFVPGEIWMPRVTVPLRAGDCTFHHA--RTVHSAGATDEPRLSTSAVYMDATAA.............................. 242
39 -18.0002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  13  5SSASFHPQQFQYTLDNNVLTLEQR-KFYEENGFLVIKNLVPDADIQRFRNEFEKIKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTL-PEILKYVECFTGP-NIMAMHTMLINKPPDSGKKTSRHPLHQRPSDLIVCAWTAMEH--ISRNNGCLVVLPGTHKKARVHLVMEKGDTVFFHP--LLIHGSGQTQGFRKAISCHFASADC............................... 257
40 -17.7004xbz_A mol:protein length:334 EvdO1  ali model follow..  17  20.GDLRVVNRIAECDIRRTGLLPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAW-STRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGH-PLLLRIMEQLVGP-NLIPTWDSMVFKTPAGAPRLAWHRDGVTGAGRVIDAGIYLDP---APEDNCVWCIPESNYTGAVPAVMQPGDLLLH--NILTLHGAPAVGKQRRVIYFEYRPAEV............................... 260
41 -17.2005epa_A mol:protein length:279 SnoK  ali model follow..  10  1..MARSADPDPGGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAGAPLRV------------SSDILVKEPKRTLPTLVHDDETNELSATLTAWIALTD--VPVERGCMSYVPGSPWQPRVAVPVRAGDVVFHHC--RTVHMAEASDSVRMAHGVVYMDADAT.............................. 239
42 -17.0005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  11  5..................QLTADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQEV----------QGPHRILEEDGRTVRALYASHTRQSVFDQLSRS-DRLLGPATQLLEC-DLYIHQFKINTKRAFGGDSWAWHQDDGLPAPRAVNVGVFLSD--VTEFNGPVVFLSGSEKHPMVSPKAASGSVMLFHP--EIIHGSAPSPFARDLLIITYNDVAN............................... 236
43 -16.2002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  15  1................MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAESTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKILARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASEPLGRVLGVWIAVED--ATLENGCLWFIPGSDNSLFVPTPVQRGALVLIHG--EVVHKSKQSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFP............. 287
44 -15.7002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  12  1GSHMSKKFALT----------AEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDR-------SAAAYQDLDAISGGTNIANYDRHLDDDFLASHICR-PEICDRVESILGPNVL----RTEFFPKYPGDEGTDWHQADTEEFGGTITVWTAFTD--ANIANGCLQFIPGTDEASAVPMQMKAGQFIIF--WSTLMHASYPSQEMRMGFASRYVPSFV............................... 263
45 -15.2006EC3 Entity 1(prereleased)  ali follow..  12  246.................RARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISR-FTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLFR-PELAELAAAFVGS-PVVPTAFALVLKEPKRAAGVPWHRDRA-APHTVCNLSICLDT--AGPENGCLEGVPGSDGGPRVPVPSKVGDVIVH--DVRLVHGSGPSDQWRRTIVIEFANPA................................ 457
46 -14.6004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  10  4..................RGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSR-----------SEASMAIMRRVQAAAFGPGQTLLS--------SVHVLDLEARGYIKPHVDSIKFCGATIAGLSLLSP---------MRLVHTQEPGEWLELLLEPGSLYILRGSARY-HEILRDEESRISVI....................................... 186
47 -14.2004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  11.NLYFQSMPERSDYEEQQLQKEEEARKVK--SGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD-HCIRPIKERRAVII....................................... 233
48 -14.0003gja_A mol:protein length:319 CytC3  ali model follow..  9  2.........TTVSEQANFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQ----------LLDRSLAIYPDSNGKANISNYDRHLDIDLLAEHIMR-PEIVDRVGSLIGRNLL----RSEFFPKYQGDEGTDWHQAGRPAFIGTITVWTAFTH--STEQNGCLQLMPGTDESQAYPMVLKPGEAVIF--WSNTMHASLPHTGSRMGFAARYVPTQV............................... 265
49 -14.0004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  7..............ERRDAEARRVKSGI------KQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAAD-HCIRPIKERRAVIILRKTRADAPRLDSNSLSPSIVSPKRRHILKAKRSHR... 248
50 -13.6004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  9  17.................................IRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD-HCIRPIKERRAVII....................................... 209
51 -13.3002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  12  1........................MQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPD--ACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 198
52 -12.7003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  13  21...............................GAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCG-GYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPD--ACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 211
53 -12.6003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  13  112...............................GLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLP-----DICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSL---------SLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRY-HGITCRKFDRTSFT....................................... 308
54 -12.6004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  12  1.........................QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTN-RQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPD--ACLINRYAPGAKLCLHQDKIHPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 197
55 -12.2006fxk_A mol:protein length:718 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3  ali model follow..  12  543.................................VYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMK-------QVGYEDQWLQLLRTYVGPMTESLFPGYHTKARAVMNFVRPDEQPSLRPHHDS-----STFTLNVALNHKGLDYEGGGCRF----LRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWTRYIMVSFVDPAA................................ 717
56 -11.9003pl0_A mol:protein length:254 Uncharacterized protein  ali model follow..  12  8................LPLGRATALQRLRAQGFCVLTP-MPLDAFDMMLPYWEELAPDLHLKDGGHYRYRRHGCFMQTLQPFEPLSNEMIHLPSWSALLVALGELFAKLRAPQGGRWYIEAHPFRIDTEGGVGR---AHRD-----GVDFVAVVFIGRQ----RGGETRVFDAAGPQGVRFTLEQPWTVLLL-DDQQVIHESTPLLPLRDTLVLTYRSGGFQAPA........................... 254
57 -10.4003on7_A mol:protein length:280 Oxidoreductase, iron/ascorbate family  ali model follow..  12  10...............RAADSAKRFVESLRETGFGVLSN-IDKELVERIYTEWQAFFNSEAKNEFMFNRETHDGFFPASISETAWGRIPDSLRANILAYYEKANTLASELLEWIEEMIANSHKTLLRILHYPPAIRAAAHED------NLITVLP------TANEPG-LQVKAKDGS---LDVPSDFGNIIINIGDPSTSHRVIDKTKSRISLPLFLHPHPS............................... 257
58 -10.1005lun_A mol:protein length:352 2-oxoglutarate-dependent ethylene/succinate-forming enzyme  ali model follow..  12  1GTNTNLQTFELPTEVTGCAADISLGRALQKDGIFQIKT-EQDRKTQEAMAASKQFCKEPLTFKSSCVSDLTYSGYVASGEEVTAGKPDFPEIKSMKTFMEELGLAGERLLKLTALGFELPINTFTDLTRDGWHHMRVLRFPPQTSTLSRLVIAA------QDDVGG-LYIRPPVEGEK-TFVTPTPGVWTVFPGDLSTPHKVKLNTRERFACAYFH.................................... 286
59 -9.8405gj9_A mol:protein length:303 1-aminocyclopropane-1-carboxylate oxidase 2  ali model follow..  10  3.KNMKFPVVDLSKLNGEEQTMALINEACENWGFFIVNHGLPHDLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVEDVISDVSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTLRAHTDAGG-----IILLF------QDDKVSGLQLLKDGD----IDVPPLNHSIVINLGDKSVLHRVVQQEGNRMSVASFYNPGSD............................... 259
60 -9.7805xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  9  12...............................GMVLLKKFLKHDDQVDIIRRCQKLGIGSSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELICLVNFYTSSGKLGLHQDKDETKPSL-LPVVSFS--------GDTAEFDVNDVDKASKVDLESGDVLIFGKSRLIFHGVSRIRPGRLNLT....................................... 227
61 -9.4905lsq_A mol:protein length:359 Ethylene Forming Enzyme  ali model follow..  12  2NHKVNLQTFELPTEVTGCAADISLGRALQKDGIFQIKT-EQDRKTQEAMAASKQFCKEPLTFKSSCVSDLTYSGYVASGEEVTAGKPDFPEIKSMKTFMEELGLAGERLLKLTALGFELPINTFTDLTRDGWHHMRVLRFPPQTSTLSRLVIAA------QDDVGG-LYIRPPVEGEK-TFVTPTPGVWTVFPGDLSTPHKVKLNTRERFACAYFH.................................... 287
62 -9.2705apa_A mol:protein length:220 ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE  ali model follow..  12  23........................VNGLKAQPWWTPKET--ERNWKLIRDEGLAVMDKAKGLFLPEDENLREKGDWSQFTLWQQGRRNENACKGAPKTCTLLEKFPETTGCRRG---------QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANETKTWEE-------------GKVLIF--DDSFEHEV-DASSFRLIFIVDVWHPELTPQQRR......................... 209
63 -9.2502iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  13  4SSSGLVPRGSHMRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQ-DVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTF------SLLCNLYRNEDSVDWHSDDEPSLGRC-PIIASLS--------GATRTFGDYTYVERVKIPLDHGTLLIMATQADWQHRVPKEYHPRVNLT-W..................................... 232
64 -9.2001w28_A mol:protein length:331 DEACETOXYCEPHALOSPORIN C SYNTHASE  ali model follow..  13  29................QGLHQDEFRRCLRDKGLFYLTD-LTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSMCYSDFERIWTQYFDRQYTASRAVAREVL--ATGTEPDGGVEAFLDCEPLLRFRYF-HYDLQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAKAPRHHVAAAGSSRTSSVFFLRPNAD............................... 284
65 -9.1604xae_A mol:protein length:373 Feruloyl CoA ortho-hydroxylase 1  ali model follow..  10  79.................DRVAEAVCDAAEKWGFFVINHGVPLEVLDDVKAATHKFFNLPVEEKRKFTKENSLSTTVRFGTSFSPLAEQALERNETLEYINKSKKMVRRLLEYLGKNLNVKELDETKESLFMGSIRVNLNY-GRHSDVSSLTILL------QDQIGG-LHVRSLASGN--VHVPPVAGSFVINIGDKSVEHRVLAGYNNRISVPIFVNPKPE............................... 321
66 -9.1203oox_A mol:protein length:312 putative 2OG-Fe(II) oxygenase family protein  ali model follow..  15  20.................TRFAQELGASFERYGFAVLSD-LDQARIDAAVDSAKAYAGVKGGARGYIPFGVETAKGADHYD--VWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINLGAEEGG-LEVLDRDGQ---LPINPPPGCLVINIGDPSTVHRVVRRGVPRYSTPFFLHFASD............................... 274
67 -9.0901w9y_A mol:protein length:319 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 1  ali model follow..  10  18.................AATMEMIKDACENWGFFLVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNLRAHTDAGG-----IILLF------QDDKVSGLQLLKDGQ----IDVPPMRHSIVVNLGDKSVMHRVIAKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYM. 286
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.