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Query: 5lbc_A mol:protein length:252 Egl nine homolog 1, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVFLast
1 -106.0005lbc_A mol:protein length:252 Egl nine homolog 1  ali model  100  1GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
2 -103.0005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  97  1GSHMASPNGQTKPLPALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNCNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERAAAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
3 -102.0002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  98  1GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 252
4 -100.0002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  97  1...........MALPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF 241
5 -99.6002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  98  2......PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKP......... 238
6 -98.6004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  97  1.......GSQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGLRVELNKPSD....... 238
7 -92.7005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  63  3.......SEEALPSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDADERARAKDKQLASGQKGVQVPVSQP........ 240
8 -90.0006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  48  25.DKTGLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVS--VNRIRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYPGSGLGYIRHIDNPNRDGRCVTVLYYLNPNWNSQDCGGQLWLYPNNENKVVKIDPIFDRLLLFWSDRRNPHEVKPAYAMRYAITLWYFDEKERALSSQNGT...................... 251
9 -76.9004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  20  6SGLVPRGSHMASHISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATEVRETIRGDQIQWIDPGQAEA-----CDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRFRDDRRMVSAVLYLNEGWQPHDGGQLRMFLAD--GVEHDVEPVAGCLVVFLSGE-VPHEVLPAGRERLSLTGWFRRRGND.............................. 221
10 -51.2003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  11  36................DKTFQDGLKKEIEPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 273
11 -51.0004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  11  33................DKTFQDGLKKEIQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVEEVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 270
12 -50.9004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  17  59..............RRTPFSHEVIVMDMDPFLHCVIPNFIQSQFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKK--------------RREPHISTLRKILFEDFRSWLSDISKIDLE-STIDMSCAKYEFTDALLCHDDELEG--RRIAFILYLVPPWDRSMGGTLDLYSIDEHFQVKSLIPSWNKLVFFEVSPVSFHEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHE......... 278
13 -50.5003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  11  17................DKTFQDGLKKEIQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQ........ 254
14 -32.7005iqs_A mol:protein length:315 WelO5  ali model follow..  12  33.........LDINATEVKKYPTAIQDIIISFDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIYGHAIVYFASSAIFRQACRTMFQGSPDFEEQVESIFHSLS-GQTYTPATIRLLLEGREIAVHVGTLLDLSDQLSYFIPLT---VPEAGGELVVYSLENQSQSVAYAPGPGDMLLFNGGR-YYHRVSEVNSPRRTIGGFLAFSKQRD............................. 302
15 -31.8003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  10  16.............ARAEHMTIAAAIHALDDEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRTTSDALDAKPLTIGHDYEVEFLLA--TRRVYEPFEAPFNFAPHCDLKRSFPRQLGGFLTIQ---GADNDAGMVMWDNRERAAKIMLKPQPGQLTLFQSK--NLHAIERCTSTRRTMGLFL.................................... 262
16 -31.4005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  16  33.................................EKIDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGE------HEVIDKIQKKTREFLNSKKHCIDKYNFEDVQVARYKPGQYYYHHYDACPKDQRLATLMVYLK---APEEGGGGETDFPTLK---TKIKPKKGTSIFFWVYKETLHAGLPVKSEKIIANQWIRAVK................................ 222
17 -31.1003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  10  4.....................DKIENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPP------------LFNRYQGGETFGYHIDNAGMIRTDLSATLFLSEP-ENYQGGELVIQDTYGQ---QSIKLSAGSLVLYPSS--SLHQVTPVLSERTAAFMWLQSMVRDEGQRR......................... 198
18 -25.1006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  9  40.............LSHLQNFKDFDYTEICND--VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQL------YEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDINLAFVVKYERQSELAPHHDS--STYTLNIALNEYGKEYT---AGGCEFIRHKF----IWQGQKVGYATIHAGKLLAYHRALPITSKRYILVSFV.................................... 228
19 -25.0002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  18  16........................VVHLSWSPRAFLKNFLSDEECDYIVEKARPKMVKSSVVDN---ESGKSVDSEIRTSTGTWFAKGE------DSVISKIEKRVAQVTMIPLE-----NHEGLQVLHYHDGQKYEPHYDPEHGGQRVVTMLMYLT---TVEEGGETVL--SECAKRGLAVKPIKGDALMFYSDPASLHGSCPTLKDKWSATKWIHVAP................................ 222
20 -24.6005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  15  33........................IISKFEEPLIVVGNVLSDEECDELIELSKSKLARSKV-------GSSRDVNDIRTSSGAFLDDNE--------LTAKIEKRISSIMNVPAS-----HGEGLHILNYEVDQQYKAHYDRSAANNRISTLVMYLN---DVEEGGETFF-----PKLNLSVHPRKGMAVYFEYNELTLHGGAPVTKEKWIATQWVRRGT................................ 215
21 -22.8004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  9  1GPEFTVDSKPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPP-------PKGERLLADKYPPHFKYVPNVATTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAQPFHRDDLEAPPVSLSVIFPLTE---TEENGATEVIGTPERDQAVLATMDPGDVLIVRQR--VVHNRTTAGKPRRVVLAYFNSV--------TPFETYRTMPREMVESMTVLGQRML 258
22 -22.0005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  9  1GPTITETSKPTLRRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSS-----PLFSKLFRDELMNDELLHGLCKRLFGPESGDYWL---TTSSVLETEPGYHGQELHREHRQSPESMLNFLTALT-DFTAENGATRVL-PPPKADTAIPAVMNPGDAVLFTGK--TLHG-NTTDFLRRGFPLIMQSC--------TPVEASVALPRELVETMTPLAQKMV 259
23 -21.6005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  10  2.MTSKDHVKSQIPRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLST-TTRLVNVLAPISKAYREDVLNSKVLHRICSDAFHVYGDYWV---LMGAVMELAPSNPAQPLHRDMPDAPATSINFLVALS-PFTAENGATHVI-SNVSMDATVRALMNPGDALLITDS--TIHC-TTGTETRRLLTITMGIS--------TPLESNLAVPRPVIESLTPLAQRLL 261
24 -21.4004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  11  5.GSMTSQHQEHTGTKRFQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPDREQLKFKADKKDDPHFWLADFIPDHVARVHNLVDFSHCFRHEILNHELLHKICRLTFEESGDYWLGYGAVIENGPGTTEQKWHRDQPDAPEGMLNFFTALTD---DAETGKTQYIEPDADHPIEYVGLKPGDTTIVSG--KITHRGSDSDKMRRAMPIMIIPS--------TPFDATCHLSRELVETMTPLAQKMI 271
25 -21.1004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  11  1.............MTTATLDRAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLHREELAQLAAAFVDG--VVPTAYALVLKEPYRAAEVPWHRDRVNGPRTVCNLSICLDD--AGPHNGCLEAVPGSATGPVVPVPVSQGDVVVH--DVRLVHGSGPNGSWRRTIVIEYADPAAP.............................. 220
26 -20.9005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  10  12....GSHMPSRLQKFPATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKR------FSKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGMGYHFNDTMVIEVQPGAPAQRLHRDQPDAPECLVNFFCAVTP---TVENGATRLVPQYGKIDSVPAIMQPGDCYMMSGK--VIHG-ATLSDQRRALAFSTIRRELRPVQAF-----PLWIPMQIATELSPRTQAMF 274
27 -20.6005ybm_A mol:protein length:314 PrhA  ali model follow..  11  9.VPRGSHMPPRLQRFPATASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKR------FSKCVIASPTFRNEIIESDLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPAQRLHRDQPAGPECVINFFCAVTP---TEENGATRLVPGSGKIETVPAIMQPGDCYLMSGK--VIHG-ATTTDRRRALALAIIRRELRPMQAF-----SLSVPMKLAREMSERSQTMF 274
28 -20.6005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  10  6.SGLVPRGSHMPPIRRVSQGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNLPFAHEVLEKVFKKDSGDYWLNMGNI---LNMLPGAEAQRPHRDDATSPDLMINITFPLN-EFRHDNGGTLLL-FYANAEDLPAAEMQVGDALIF--TGKCVHGGGASDKPRIGLALAAQPG--------TPRESNVNVPRDIVETMTPLAQRMI 268
29 -20.5003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  11  15...................................LSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYAS-----LTDLPWRFPIFADLVKSLDAHVAAFAEDLELDGRALELEDLWINILPEGGSHASHIHP----HSVISGTTYVS---MPGGTSALKLEDPRHLRQFIYVTPAVGDVLLWES--WLRHEVPMSEDDRISVS....................................... 198
30 -20.3002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  10  19...................................LSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYAS-----LTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKA-EDIWINILPEGGVHGSHIHP----HSVISGTTYVA---MPEGTSALKLEDPRLPRTFRSVAPKVGDVLLWES--WLRHEVPMAEEDRISVS....................................... 202
31 -20.2004xab_A mol:protein length:252 EvdO2  ali model follow..  9  1..........MDAMEVVGTIDHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKYVPELLDSPARCRSIASAFLDMAEEELEFYG--HAILKPPRYGAPTPWHQDDPRWRRRGLSIWTTLDE--ATVESGCLHYLPGGDPTSAVACPLAPGGAVVH--DFRTPHYAGPTDQPRRAYVLVFMSAPAEVADPEPRPWMDWG................. 252
32 -20.0004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  9  1.............LHMVPALTREQLYIFDTTGFLVIPGVFGSGEVESFRSELERLDTV----DPGFPRTRRYPDLPAASPVFARLALDDRLLAPVRDVVNEGYGLRRTKDSVLYLHGGNSELLDLGDRQVGRDLSITHTYHDGKLYCPYVKALVYLSDIQSPEDGSFCYV-VDSGFPTLSDVFVRSGDVLLL--NEALMHGTRRTEGDRLLTAFGYGPTFFTEWRELDAETADLRGAGY--VDHDVEEDFVL 261
33 -19.7003nnf_A mol:protein length:344 CurA  ali model follow..  11  4GVDLGTENLYFQSNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHN---------ALFSVEPNHKGLPWHVGVGKTEDFGASIWIPLDK--TKEHRGGMQYVTIKDGYEEDEYNL--GDAFFF--NKYVLHQSVPLHKLRRAFVIRLVDYDTRVDEE.......................... 276
34 -19.6002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  13  1GSHMTNVTGDYTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMRELVALGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFGPNQDFRTFWIPLIR---TRESGGVALADGSHREHLLHSPMEPGDILLF--HAHMCHKSIPNLSKRMSMDTRVQPAKSH.............................. 256
35 -18.7002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  15  5SSASFHPQQFQYTLDNNVLTLEQR-KFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQRPSDLIVCAWTAMEH--ISRNNGCLVVLDYEENKARVHLVMEKGDTVFF--HPLLIHGSGQTQGFRKAISCHFASAD................................ 256
36 -18.3004xbz_A mol:protein length:334 EvdO1  ali model follow..  16  20.GDLRVVNRIAECDIRRTGLLPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAW-STRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAG--HPLLLRIMEQLVGPNLIPTWDSMVFKTPAGAPRLAWHRDGVTGAGRVIDAGIYLDP---APEDNCVWCIPESNYTGAVPAVMQPGDLLLH--NILTLHGAPAVGKQRRVIYFEYRPAEVEWQLGPHSAEYIGLKQ............... 276
37 -18.1005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  11  6DQETEPGVPADLPAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEV---------LLKENKEKDASVPTAPHHDPFSTAGTALTAWVALVD---PVERGCMTFVPGEIWMPRVTVPLRAGDCTFHHA--RTVHSAGATDEPRLSTSAVYMDAT................................ 240
38 -18.1004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  10  101...........................CDHDGSVELPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLYPSTAFNSLKPSNDGHRIRKPHKDN---LDITPSSLFYFGN---QNTEGYLELTD----NCKVFVQP--GDVLFFKG-NEYKHVVANTSGWRIGLVYFAHKGSKTKPYYEDTQKNSLKIHKETK........... 321
39 -18.0004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  10  27...........SEWTNDAPISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPA------ALDADTIVTEPQSNEIRSIFEIHAQSPVMARLAA--DARLADVARFLLGDEVYIHQSRLNYKPGFKGREFYWHSDDGMPRMRALSMSVLLAE--NTPHNGPLMVIPGSHRHGIVAPTGKPGTVILF--DCNLMHGSNGTPFPRANAFLVYNAVSN............................... 270
40 -17.4005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  10  5..................QLTADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQE----------VQGPHRILEEDGRTVRALYASHTRQSVFDQLSR--SDRLLGPATQLLECDLYIHQFKINTKRAFGGDSWAWHQDDGLPAPRAVNVGVFLSD--VTEFNGPVVFLSGSEKHPMVSPKAASGSVMLFHP--EIIHGSAPSPFARDLLIITYNDVANAPKPAGEPRPEY................... 248
41 -17.4003emr_A mol:protein length:310 EctD  ali model follow..  11  26..........DRSKDNQAPITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDS------IKDVASDKVIREPESNDIRSIFHVHQDDNYFQDVAN--DKRILDIVRHLLGSDVYVHQSRINYKPGFKGKEFDWHSDDGMPRMRAISVSIALSD--NYSFNGPLMLIPGSHNGGISVPTGKAGSVTLFES--NTMHGSTSTPYPRNNLFMVYNSVKN............................... 271
42 -17.1005epa_A mol:protein length:279 SnoK  ali model follow..  10  1..MARSADPDPGGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEK---------EGREIWGAGEDEVQVHYVAQAWQKHPELRSLV--LHPEISGIALRLAGAPLRVYSSDILVKEPKRTLPTLVHDDETNELSATLTAWIALTD--VPVERGCMSYVPGSPWQPRVAVPVRAGDVVFHHC--RTVHMAEASDSVRMAHGVVYMDADAT.............................. 239
43 -16.8002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  15  1................MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAESTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPTHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASEPLGRVLGVWIAVED--ATLENGCLWFIPGSDNSLFVPTPVQRGALVLIHG--EVVHKSKQSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFP............. 287
44 -15.7006EC3 Entity 1(prereleased)  ali follow..  12  246.................RARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISR-FTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLF--RPELAELAAAFVGSPVVPTAFALVLKEPKRAAGVPWHRDRANAPHTVCNLSICLDT--AGPENGCLEGVEIRDGGPRVPVPSKVGDVIVH--DVRLVHGSGPSDQWRRTIVIEFANPA................................ 457
45 -15.3002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  12  1GSHMSKKFALT----------AEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDR-------SAAAYQDLDAISGGTNIANYDRHLDDDFLASHICR-PEICDRVESILGPNVL----RTEFFPKYPGDEGTDWHQADTEEFGGTITVWTAFTD--ANIANGCLQFIPGTDEASAVPMQMKAGQFIIF--WSTLMHASYPSQEMRMGFASRYVPSF................................ 262
46 -14.2004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  10  17...............................AAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSR-----------SEASMAIMRRVQAAAFGPGQTLLS--------SVHVLDLEARGYIKPHVDSIKFCGATIAGLSLLSP---------MRLVHTQEPGEWLELLLEPGSLYILRGSARY-HEILRDEESRISVI....................................... 186
47 -14.0004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  7..............ERRDAEARRVKSGI------KQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAAD-HCIRPQDERRAVIILRKTRADAPRLDSNSLSPSIVSPKRRHILKAKRSHRK.. 249
48 -13.7003gja_A mol:protein length:319 CytC3  ali model follow..  11  2.........TTVSEQANFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEF-------------FPKYQGDEGTDWHQAGRPAFIGTITVWTAFTH--STEQNGCLQLMPGTDESQAYPMVLKPGEAVIF--WSNTMHASLPHTGSRMGFAARYVPTQ................................ 264
49 -13.6004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  11.NLYFQSMPERSDYEEQQLQKEEEARKVK--SGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVESAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD-HCIRPQDERRAVII....................................... 233
50 -13.0002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  12  1........................MQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPD--ACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 198
51 -12.5006fxk_A mol:protein length:718 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3  ali model follow..  12  543.................................VYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFPGYHT----KARAVMNFVVRYRPDEQPSLRPHHDS-----STFTLNVALNHKGLDYEGGGCRF----LRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWTRYIMVSFVDPAA................................ 717
52 -12.5004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  8  17.................................IRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV------SAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD-HCIRPIKERRAVII....................................... 209
53 -12.4003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  12  21...............................GAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPD--ACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 211
54 -12.3004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  12  1.........................QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTN-RQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPD--ACLINRYAPGAKLCLHQDKIHPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGESRLFYHGIQPLKAGRYNLT....................................... 197
55 -12.0003pl0_A mol:protein length:254 Uncharacterized protein  ali model follow..  12  6..............IELPLGRATALQRLRAQGFCVLTP-MPLDAFDMMLPYWEELAPDLHLKDGGHYRYRRHGCFMQTLQWFEPLSNEMIHLPSWSALLVALGELFAKLRAPQGGRWYIEAHPFRIDTEGGVGR---AHRDGVD-----FVAVVFIGRQ----RGGETRVFDAAGPQGVRFTLEQPWTVLLL-DDQQVIHESTPLLPLRDTLVLTYRSGGFQAPA........................... 254
56 -11.8003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  12  112...............................GLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHY------ENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPQMTINQYEPGQGIPAHIDTHSAFEDEIVSL---------SLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRY-HGITCRKFDRTSFT....................................... 308
57 -10.6005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  9  12...............................GMVLLKKFLKHDDQVDIIRRCQKLGIGSSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELICLVNFYTSSGKLGLHQDKDETKPSL-LPVVSFS--------GDTAEFDVNDVDKASKVDLESGDVLIFGKSRLIFHGVSRIRPGRLNLT....................................... 227
58 -10.6003on7_A mol:protein length:280 Oxidoreductase, iron/ascorbate family  ali model follow..  12  10...............RAADSAKRFVESLRETGFGVLSN-IDKELVERIYTEWQAFFNSEAKNEFMFNRETHDGFFPASISETAWGRIPDSLRANILAYYEKANTLASELLEWIEEMIANSHKTLLRILHYPPAIRAAAHED------NLITVLP------TANEPG-LQVKAKDGS---LDVPSDFGNIIINIGDPSTSHRVIDKTKSRISLPLFLHPHPS............................... 257
59 -9.8805gj9_A mol:protein length:303 1-aminocyclopropane-1-carboxylate oxidase 2  ali model follow..  9  21.................DQTMALINEACENWGFFIVNHGLPHDLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVEDVISDVSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSRAHTDAGGIILLF------QDDKVSGLQLLKDGD----IDVPPLNHSIVINLGDKSVLHRVVTQEGNRMSVASFY.................................... 254
60 -9.8503oox_A mol:protein length:312 putative 2OG-Fe(II) oxygenase family protein  ali model follow..  14  16.............AKDFTRFAQELGASFERYGFAVLSD-LDQARIDAAVDSAKAYAGVKGGARGYIPFGVETAKGADHYDL-VWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINLGAEEGG-LEVLDRDGQ---LPINPPPGCLVINIGDPSTVHRVVRRGVPRYSTPFFLHFASD............................... 274
61 -9.4301w9y_A mol:protein length:319 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 1  ali model follow..  10  18.................AATMEMIKDACENWGFFLVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSRAHTDAGGIILLF------QDDKVSGLQLLKDGQ----IDVPPMRHSIVVNLGDKSVMHRVIAKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYM. 286
62 -9.4005lun_A mol:protein length:352 2-oxoglutarate-dependent ethylene/succinate-forming enzyme  ali model follow..  13  1GTNTNLQTFELPTEVTGCAADISLGRALQKDGIFQIKT-EQDRKTQEAMAASKQFCKEPLTFKSSCVSDLTYSGYVASGEEVTMEELGLAGERLLKLTALGFELPINTFTDLTRDGWHHMRVLRFPPQTSTLSRGIGAHTD--------LVIAA------QDDVGG-LYIRPPVEGEK-TFVTPTPGVWTVFPGDLSTPHKVKLNTRERFACAYFH.................................... 286
63 -9.0005lsq_A mol:protein length:359 Ethylene Forming Enzyme  ali model follow..  13  20..............AADISLGRALIQAWQKDGIFQIKT-EQDRKTQEAMAASKQFCKEPLTFKSSCVSDLTYSGYVASGEEVTMEELGLAGERLLKLTALGFELPINTFTDLTRDGWHHMRVLRFPPQTSTLSRGIGAHTD--------LVIAA------QDDVGG-LYIRPPVEGEK-TFVTPTPGVWTVFPGDLSTPHKVKLNTRERFACAYFH.................................... 287
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.