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Query: 5m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GPTITETSKPTLRRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMNDELLHGLCKRLFGPESGDYWLTTSSVLETEPGYHGQELHREHDGIPICTTLGRQSPESMLNFLTALTDFTAENGATRVLPGSHLWEDFSAPPPKADTAIPAVMNPGDAVLFTGKTLHGAGKNNTTDFLRRGFPLIMQSCQFTPVEASVALPRELVETMTPLAQKMVGWRTVSAKGVDIWTYDLKDLATGIDLKSNQVAKKALast
1 -116.0005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model  100  1GPTITETSKPTLRRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMNDELLHGLCKRLFGPESGDYWLTTSSVLETEPGYHGQELHREHDGIPICTTLGRQSPESMLNFLTALTDFTAENGATRVLPGSHLWEDFSAPPPKADTAIPAVMNPGDAVLFTGKTLHGAGKNNTTDFLRRGFPLIMQSCQFTPVEASVALPRELVETMTPLAQKMVGWRTVSAKGVDIWTYDLKDLATGIDLKSNQVAKKA 294
2 -100.0005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  34  9..VPRGSHMPPIRRVNASQGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEINMHNRTIHMGDLVLTSKTYRDELLNLPFAHEVLEKVFKKDSGDYWLNMGNILNMLPGAEAQRPHRDDYLYPVSQHDPATSPDLMINITFPLNEFRHDNGGTLLLPKSHTGPNADFY-ANAEDLPAAEMQVGDALIFTGKCVHGGGANRS-DKPRIGLALAAQPGYLTPRESNVNVPRDIVETMTPLAQRMIGWGTVRTKDTGLNMLQDKDFHEALGLKSKTA.... 300
3 -98.9004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  31  1GPEFTVDSKPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLADKYPPHFKYVPNVATTCPTFRNTVLINPVIHAICEAYFQRTG-DYWLSAAFLREIESGMPAQPFHRDDATHPLMHYQPLEAPPVSLSVIFPLTEFTEENGATEVILGSHRWTEVGTP--ERDQAVLATMDPGDVLIVRQRVVHAGGGNRTTGKPRRVVLAYFNSVQLTPFETYRTMPREMVESMTVLGQRMLGWRTMKPS---DPNIVGINLIDDKRLEN....... 283
4 -95.3005ybm_A mol:protein length:314 PrhA  ali model follow..  36  9.VPRGSHMPPRLQRFPATASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEKIPVEVTN-NGNSNDRTKRFSKCVIASPTFRNEIIESDLMHELCDRVFSKPGEGYHFNDNMVIEVQPGAPAQRLHRDQELYPWWNSMGPAGPECVINFFCAVTPFTEENGATRLVPGSHLWPEFTQINEGKIETVPAIMQPGDCYLMSGKVIHGAGHNATTTDRRRALALAIIRRELRPMQAFLSVPMKLAREMSERSQTMFGFRSSVQHCDHFWGNDGKDIAHHLGLISSA..... 308
5 -94.5005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  32  10..PRGSHMPSRLQKFPATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQVTN-DGNSNDRVKRFSKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGYHFNDTMVIEVQPGAPAQRLHRDQELYPWWNSMGPDAPECLVNFFCAVTPFTVENGATRLVPGSNRWPELTCPQYGKIDSVPAIMQPGDCYMMSGKVIHGAGHNATLSDQRRALAFSTIRRELRPVQAFLWIPMQIATELSPRTQAMFGFRSSTQHCDHFWGNDGKDIGEHLGLISSA..... 308
6 -91.4004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  32  8..TSQHQEHTGTKRFSIQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADFIPDHVARVHNLVDFSHCFRH-EILNHELLHKICRLTFEESGDYWLGYGAVIENGPGTTEQKWHRDQPRYPLVKE-GPDAPEGMLNFFTALTDFDAETGKTQYILGSNKRVELGEPDAD-HPIEYVGLKPGDTTIVSGKITHRGSDNRS-DKMRRAMPIMIIPSILTPFDATCHLSRELVETMTPLAQKMICRRSVMIPA--PGTVEVKTGIWCVNMREAGEQ... 301
7 -88.4005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  32  2.MTSKDHVKSQIPRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTNHVLSTTTRLVNVLAPISKAYREDVLNSKVLHRICSDAFH-VYGDYWVLMGAVMELAPSNPAQPLHRDMRFSHPIVEYKPDAPATSINFLVALSPFTAENGATHVILGSHKWQNLSNV--SMDATVRALMNPGDALLITDSTIHCGGAETTGTETRRLLTITMGISQLTPLESNLAVPRPVIESLTPLAQRLLGWASQRSAA---PRDIGLLTIRGNSIEKTMNLKA. 292
8 -59.0004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  17  2..............TTATLDRAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVERVHNLEKQDWAPERDLLHREELAQLAAAFVDGP---VVPTAYALVLKEPYRAAEPWHRDRVNVG---------PRTVCNLSICLDDAGPHNGCLEAVPGSHLLPDDAAKVRATGPVVPVPVSQGDVVVHDVRLVHGSGPNAN-GSWRRTIVIEYADPAAPPA......................................................... 222
9 -58.4004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  15  4................VPALTREQLYIFDTTGFLVIPGVFGSGEVESFRSELERLDTVDPGF---------PRTRRYPDLPAASPVFAR-LALDDRLLAPVRDVVNQP---LRLLEGYGLRRTKDSVDRQVGRDLSITHTYHDGKL--YCPYVKALVYLSDQSPEDGSFCYVQGSHKANNTSLVDSGFPTLSDVFVRSGDVLLLNEALMHGTRRKLT-EGDRLLTAFGYGPTFFTEWREL-DAETADLRGAGYVDHDVEE.................................. 257
10 -56.2002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  11  1GSHMSKKF----------ALTAEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDLDAISGGTNIANYDRHLDDDFLASHICRPEICDRVESILGPN---VLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQNEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDETKRDEASAVPMQMKAGQFIIFWSTLMHASYPHSGSQEMRMGFASRYVPSFVHVYPDSDHIEEYGGRISLEKYGAVQG.................................. 291
11 -55.6003gja_A mol:protein length:319 CytC3  ali model follow..  16  2.........TTVSEQANFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSN--GKANISNYDRHLDIDLLAE-HIMRPEIVDRVGSLIGRN---LLCWRSEFFPKYQGDEGTDWHQAATFAHATSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHTSMNYDESKGDESQAYPMVLKPGEAVIFWSNTMHASLPHTGSTDYRMGFAARYVPTQVQVYPGTENLTEYGDGINLEKYGAVLG.................................. 293
12 -54.8005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  16  7....................TADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQEVQGPHRILEED--GRTVRALYASHTRQSVFDQ-LSRSDRLLGPATQLLECD---LYIHQFKINTKRAFGGDSAWHQDFIVWRDTDGLPAPR---AVNVGVFLSDVTEFNGPVVFLSGSHQRGTVERKAREKHPMVSPKAASGSVMLFHPEIIHGSAPNIS-PFARDLLIITYNDVANAPKPA....................................................... 241
13 -54.7002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  15  5.SSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKTISKSEYAPSEKMITKVQDFQEDKELFR-YCTLPEILKYVECFTGPN---IMAMHTMLINKPPDSGKKSRHPLHQDLHYF---PFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKT-QGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFG.................................. 283
14 -54.7005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  19  6DQETEPGVPADLPAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGA--GTVMDYVADAQLGSDTMRR-LATHPRIAALAEYLAGSP---LRLFKLEVLLKENKEKDAAPHHDAFAFPF------STAGTALTAWVALVDVPVERGCMTFVPGSHLLPDPDRPGEIWMPRVTVPLRAGDCTFHHARTVHSAGANST-DEPRLSTSAVYMDATAAYRPTGIAFLDDLPGTGADPLRE..................................... 264
15 -53.8003emr_A mol:protein length:310 EctD  ali model follow..  16  17.KRKDPVIYTDRSKDNQAPITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKREPESNDIRSIFHVHQDDNYFQD-VANDKRILDIVRHLLGSD---VYVHQSRINYKPGFKGKEDWHSDFETWHVEDGMPRMR---AISVSIALSDNYSFNGPLMLIPGSHNYFSLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNIT-PYPRNNLFMVYNSVKNRLVEP....................................................... 276
16 -53.6004xab_A mol:protein length:252 EvdO2  ali model follow..  14  1...........MDAMEVVGTIHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAERDREGPPLLPQIIKPEKYVPELLD-SPHFARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHQDEAYMDPR------WRRRGLSIWTTLDEATVESGCLHYLPGGHRGPVLPTDDVDPTSAVACPLAPGGAVVHDFRTPHYAGPNLT-DQPRRAYVLVFMSAPAEVADP....................................................... 243
17 -53.2002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  18  2.................ACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQENKIGHALHAHDPVFKS-ITHSFKVQTLARSLGLQMP---VVVQSMYIFKQPHFGGESPHQDASFLYT------EPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSREPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNLS-DRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQ......................................... 288
18 -52.5004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  18  28............EWTNDAPISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIEPQSNEIRSIFEIHAQSPVMAR-LAADARLADVARFLLGDE---VYIHQSRLNYKPGFKGREYWHSDFETWHVEDGMPRMR---ALSMSVLLAENTPHNGPLMVIPGSHRTYLTCAELAHRHGIVAPTGKPGTVILFDCNLMHGSNGNIT-PFPRANAFLVYNAVSNRLEKP....................................................... 275
19 -51.5005epa_A mol:protein length:279 SnoK  ali model follow..  19  1...MARSADPDPGGPTTAENLKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGED-EVQVHYVAQAWQKHPELRS-LVLHPEISGIALRLAGAP---LRVYSSDILVKEPKRTLPLVHDDETGLPL------NELSATLTAWIALTDVPVERGCMSYVPGSHLRAREDWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTS-DSVRMAHGVVYMDADATYRPG....................................................... 243
20 -49.7004xbz_A mol:protein length:334 EvdO1  ali model follow..  17  20.GDLRVVNRIAECDIRRTGLLPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAWSTRSMEPDQPGAAPVRIEYVVDKARPIAM-LAGHPLLLRIMEQLVGPN---LIPTWDSMVFKTPAGAPRAWHRDAGLYD--NAVGVTGAGRVIDAGIYLDPAP-EDNCVWCIPESNYWGDDRASEWDTTGAVPAVMQPGDLLLHNILTLHGAPAVVGKQ--RRVIYFEYRPAEVEWQLG....................................................... 265
21 -49.4002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  16  1GSHMTNVTGDYTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMREGLVALGAADPHAEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGEPVTTIRYYPSQAGSEEPSFHYLPFHQDGFYIGPNQD--------FRTFWIPLIRTTRESGGVALADGSHRRGKRDTEVSEDEHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRRMSMDTRVQPA.............................................................. 253
22 -49.2003nnf_A mol:protein length:344 CurA  ali model follow..  12  4GVDLGTENLYFQSNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKN---LMIMHNALFSVEPNHKGLPWHVGVGSFSF-----TKTEDFGASIWIPLDKITKEHGGMQYVSTKIFPGQFYIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGHKLRRAFVIRLVDYDTR........................................................... 272
23 -42.7006EC3 Entity 1(prereleased)  ali follow..  19  241............IVVVGRARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVERIHNLEKQDWAERE-LLFRPELAELAAAFVGSP---VVPTAFALVLKEPKAAGVPWHRDRANVA---------PHTVCNLSICLDTAGPENGCLEGVPGSHLLPDDIDVPEDGGPRVPVPSKVGDVIVHDVRLVHGSGPNPS-DQWRRTIVIEFANPAISLPS........................................................ 462
24 -34.1004rgk_A mol:protein length:418 Uncharacterized protein  ali model follow..  13  52.LAEGKNPVPQLHDIINGKVTEEQKAQIKQRGCCAILGVFPQEKATAWNREIGDYLDRNNFVERLKNAAEDNYFGTLAAYGIYWSTPQVEARQDKRMQAVQIFLNN-DANRVVTYADRTRRRPPKSSSLGLHVDGGSIREFPSPAVCSMFRTFQGWTALTPQRTHAGTLNVIPIANAMSEQWHPLLMEAISPIPDLEAGDTVFWHCDVIHSVENEHNGEFDSNVMYIAAAPWFAADDFEVDFIGRATIKNLTEIGKQQLGIT................................ 417
25 -33.7002dbi_A mol:protein length:461 Hypothetical protein ybiU  ali model follow..  11  91.NALKAQGDAVWPVLSAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQAQQSEEMANAQSFLNR-NPDVSVIYPDRIRRRPPGTTSKGLHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAETNWEGRFTLADLNIHGKRALGMDV............................... 461
26 -33.3002csg_A mol:protein length:424 putative cytoplasmic protein  ali model follow..  11  57.KAQGQPVWPIIPELAMGNISDATRAEVKRRGCAVIKGHFPREQALAWDQSMLDYLDKNHFDEVYKGPGDNFFGTLSASRPEIYPVYWSQAQQSEEMALAQSFLNR-NPDISIIYPDRIRRRPPGTTSKGLHTDSGALYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMSEQWHPLLMAALTSIPPLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMFPREDYETTWEGRFTLRDLNIHGKRALGIDV............................... 424
27 -27.4006AKZ Entity 1(prereleased)  ali follow..  12  51.TEIAKIGPSYVPKCDDNKLPQQVSELFKQRGCLMIENVIDVDRIDIWFNELVEFCKTHPETAGYTFP----NPTSWYNVFWSKPQT--EARFHPNMKAIFKAMSK-DLDTQLVYGDRIRIREPGKAALPLHLDKDEDDTGGKSTICSSFRTLQGWLALSNNKSGEGTLRVLPSLKLFLDKFYPHLHQGIISIPDVKKGSFVFWHCDLPHEVDREHNGNGHSSVLYYGQTPLSITNIQTLLDTRDAFLKKNDIDSKRSMGLE................................ 435
28 -22.8002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  9  1GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGT--YVRHVDN----------PNGDGRCVTCIYYLNDWDAKVSGGILR-----------FPEGKAQFADIEPKFDRLLFFWSDNPHE----QPAYATRYAITVWYFDA--KYLTGEKGVRVELNKPSDSVGKDVF................................... 252
29 -22.0005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  9  1GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRG-IEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVTKAMVACYPGNGTGYVRHVDN----------PNGDGRCVTCIYYLNDWDAKVSGGILR-----------FPEGKAQFADIEPKFDRLLFFWSDNPHE----QPAYATRYAITVWYFDA--KYLTGEKGVRVELNKPSDSVGKDVF................................... 252
30 -22.0002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  8  1...........MALPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGT--YVRHVDN----------PNGDGRCVTCIYYLNDWDAKVSGGILR-----------FPEGKAQFADIEPKFDRLLFFWSDNPHE----QPAYATRYAITVWYFDA--KYLTGEKGVRVELNKPSDSVGKDVF................................... 241
31 -21.8005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  9  1GSHMASPNGQTKPLPALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTKAMVACYPGNGT-GYVRHVDN----------CNGDGRCVTCIYYLNDWDAKVSGGILR-----------FPEGKAQFADIEPKFDRLLFFWSDNPHE----QPAYATRYAITVWYFDA--KYLTGEKGVRVELNKPSDSVGKDVF................................... 252
32 -21.4005iqs_A mol:protein length:315 WelO5  ali model follow..  13  34..........DINATEVKKYPTAIQDIIINRDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKKDYFASSAIFRQACRTMFQGSPDFEEQVESIFHSLSGLPVEIPTGTIRLLLEGREIAVHVGNDFLLMPAANTLLDLSDQLSYFIPLTV-PEAGGELVVYSLEWNPQEASKYAQNQSQSVAYAPGPGDMLLFNGRYYHRVSE-VIGNSPRRTIGGFL................................................................. 295
33 -21.0002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  9  1...MPNGQTKPLPAL--KLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRG--PGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGT--YVRHVDN----------PNGDGRCVTCIYYLNDWDAKVSGGILR-----------FPEGKAQFADIEPKFDRLLFFWSDNPHE----QPAYATRYAITVWY................................................................. 211
34 -21.0005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  9  3.......SEEALPSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRG--PGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTKAMVACYPGNGL-GYVRHVDN----------PHGDGRCITCIYYLNQ-VKVHGGLLQIF-----------PEGRPVVANIEPLFDRLLIFWSDNPHE----KPAYATRYAITVWYFDADERARAKDKYQLASGQKGVQVPVSQ..................................... 239
35 -20.7004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  11  6SGLVPRGSHMASHISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAENPAGVGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDR---------FRDDDRRMVSAVLYLNE-PHDGGQLRMFLAD-------------GVEHDVEPVAGCLVVFLSEVPHEV---LPAGRERLSLTGWF................................................................. 215
36 -20.5004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  9  1.......GSQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRG-EPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGT--YVRHVDN----------PNGDGRCVTCIYYLNDWDAKVSGGILR-----------FPEGKAQFADIEPKFDRLLFFWSDNPHE----QPAYATRYAITVWY................................................................. 209
37 -19.6006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  10  28....GLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYPGSGL-GYIRHIDN----------PNRDGRCVTVLYYLNP-SQDCGGQLWL-----------YPNNENKVVKIDPIFDRLLLFDRRNPHE----KPAYAMRYAITLWY................................................................. 237
38 -19.4003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  12  1...MQHTYPAQLMRFGTAARAEHMTIA-ADEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHQREQGDKLVSKAAEYFGIACRVNDGLRTTRFVRLFSDALDAKPLTEFLLATRRVYEPFEAPFNFAPHCDDVSYGRDTVNWPLKRSFQLGGFLTIQG-ADNDAGMVMWD-AEYRETGAIAALERAAKIMLKPQPGQLTLFQSKNLHA----ERCTSTRRTMGLFL................................................................. 262
39 -18.7003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  11  2...................GSDKIENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMD-----RLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAI--RSTPDGMIRTDLSATLFLSEPE-NYQGGELVI--------------QDTYGQQSIKLSAGSLVLYPSSSLHQVTP--VLSGERTAAF-----MWLQSMVRDEG-QRRLLFQLDQSIQSLTA.................................. 212
40 -17.4003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  13  23EDKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLLYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGC---LTHDDV----------GSRRISFILYLPDPDKWKSHYGGGLRL-----FPSILPNVPHSDPSAKLVPQFNQIAFFPGFSFHD--EEVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQI.................................... 274
41 -17.0003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  13  5.DKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLLYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGC---LTHDDV----------GSRRISFILYLPDPDKWKSHYGGGLRL-----FPSILPNVPHSDPSAKLVPQFNQIAFFPGFSFHD--EEVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQI.................................... 255
42 -16.8004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  13  21.DKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLLYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGC---LTHDDV----------GSRRISFILYLPDPDKWKSHYGGGLRL-----FPSILPNVPHSDPSAKLVPQFNQIAFFPGFSFHD--EEVKVDKHRLSIQGWYHIPQVGEEGYIPGEEEAWVRNNTSTLAQI.................................... 271
43 -15.8006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  9  37............PEFLSHLQNFKDFDYTEICNDVYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYNYVAPFVRHLYNNYKTKDINLAFVVKYDMERQSELAPHHDSS-------------TYTLNIALNEYGKEYTAGGCEF---------------IRHKFIWQGQKVGYATIHAGKLLAYHRALPITSGKRYILVS-----FVN........................................................... 229
44 -14.8004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  11  79.....TNANITLKDEKWLKNVRTAYFVCDHDGSVELPNVLPKELVEEFTEKFESIQTGRKKDTDNSMPFNYVTADLSQELGQYLSEIVNPQINYTCVSSRTINYLVSLNDSYYALNNCLYPSTA-HRIRKPHKDNL-------------DITPSSLFYFGNFQNTEGYLEL----------------TDKNCKVFVQPGDVLFFKGNYKHVVAN---TSGWRIGLVYFAHKGSKTKPYYEDTQKNSLKIHKETK........................................ 321
45 -14.8002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  11  4SSSGLVPRGSHMRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITY--QQPRLTAWYGELPYTYSRITMEPNLKNRIEENTGHTFNSLLCNLY-----RNEKDSVDWHSDD------------EPSLGRCPIIASLSF----GATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGAT-HRVPKEYHSREPRVNLTF................................................................... 220
46 -13.7002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  15  26.................................FLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKG-------EDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDY-FHDPVNAGPEHGGQRVVTMLMYLTTV--EEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFDPASLHGSCPTLKGDK.......................................................................... 211
47 -13.7003pl0_A mol:protein length:254 Uncharacterized protein  ali model follow..  12  7...............ELPLGRATALQRLRAQGFCVLTP-MPLDAFDMMLPYWEELAPDLHLKDGGHYRYRRHGCFMQGGMERWFEPLSNEMIHLPSWSALLVALGEPQGGRWYIEAHPFRIDTEGGVGEGAHRDGVDF---------------VAVVFIGRQGVRGGETRVFDAA-----------GPQGVRFTLEQPWTVLLLDQQVIHESTPDPAVPAHRDTLVLTYRSG.............................................................. 248
48 -13.5002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  12  19...................................LSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDDGKALRLEDIWINILPEGG-VHGSHI--------------HPHSVISGTTYV-AMPEGTSALKL-PRLPFMTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMNMA-EEDRISVSFNYA................................................................ 206
49 -13.1003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  9  10..................................LYHAPLSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAADGRALELEDLWINILPEGG-SHASHI--------------HPHSVISGTTYV-SMPGGTSALKLEDPRHA-ARRKTARDELRQFIYVTPAVGDVLLWESWLRHEVPMNMS-EDDRISVSFNY................................................................. 201
50 -12.9005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  9  32................................YEKIDGFLSDIECDVLINAAIKKGLIKSTENDPIKLDPKSRNSEQTWFMPGEHEVIDKIQKK------TREFLNSKKHCIDKYNFEDVQVKPGQYYYH-HYDG----DDCDDACPKDQRLATLMVYLKAPEEGGGGETDFPTLK---------------TKIKPKKGTSIFFYKETLHAGLPVKSGEK-------IIANQWIRAVK........................................................ 222
51 -12.8004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  8  26ARVGKKGKKEVMAEFSDAVTEETLKKQVAEALHCVIPNFIQSQD---FLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFED-FRSWLSDISKIDLESTIDMSCAKY---EFTDALLCHDDE----------------RIAFILYLVPWDRSMG------GTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDW................................. 283
52 -12.1001vrb_A mol:protein length:342 Putative asparaginyl hydroxylase  ali model follow..  7  5.KIMSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGIPGFEKVRTLENVVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLPQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAY-------------------NLIFQ-----------IQGEKTWKLAKNENVSNPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELNGYLESLI................................... 294
53 -11.9004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  9  14....FQSMPERSDYEEQQLQKEEEARKVK--SGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGEWVHQLVIQKLVEHIPEGFVNSAVINDYQPGGC--VSHVDP-------------IHIFERPIVSVS------FSDSALCFGCKFQF--KPIRVSEPVLSLPVRRGSVTVLSGYA-HC--RPQDIKERRAVIIL................................................................... 234
54 -11.9004mgt_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  10  7...........................RAEGLDSSYTVLFGKAEADEIFQELEKEVEALARVQVFGKWHSVPAKQATYGDAGLTYTFSGLTLSIPVLERIRDHV--SGVTGQTFNFVLINRYKDGSDHICEHRDD------------ERELAPGSPIASVSF----GASRDFVFRHK-DSRGKSPSRRVAVVRLPLAHGSLLMMNHPTYHSLPVRKKVLAPRVNLTF................................................................... 199
55 -11.8003rzm_A mol:protein length:206 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  12  5.........................HIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFDAGLTYTFSGLTLSPKPWIPVLER---IRDHVSGVTGQTFNFVLINRY-----KDGSDHICEHRDD------------ERELAPGSPIASVSF----GASRDFVFRHK-DSRGKSPSRRVAVVRLPLAHGSLLMMNHPTYHSLPVRKKVLAPRVNLTF................................................................... 199
56 -11.7003rzg_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  11  9...........................RAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFDAGLTYTFSGLTLSPKPWIPVLER---IRDHVSGVTGQTFNFVLINRY-----KDGSDHICEHRDD------------ERDLAPGSPIASVSF----GASRDFVFRHK-DSRGKSPSRRVAVVRLPLAHGSLLMMNHPTYHSLPVRKKVLAPRVNLTF................................................................... 201
57 -11.6004mg2_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  10  7...........................RAEGLDSSYTVLFGKAEADEIFQELEKEVEALARVQVAGKWHSVPRKQATYGDAGLTYTFSGLTLSIPVLERIRDHV--SGVTGQTFNFVLINRYKDGSDHICEHRDD------------ERELAPGSPIASVSF----GASRDFVFRHK-DSRGKSPSRRVAVVRLPLAHGSLLMMNHPTYHSLPVRKKVLAPRVNLTF................................................................... 199
58 -11.6003h8o_A mol:protein length:209 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2  ali model follow..  12  9...........................RAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFDAGLTYTFSGLTLSPKPWIPVLER---IRDHVSGVTGQTFNFVLINRY-----KDGSDHIGEHRDD------------CRELAPGSPIASVSF----GASRDFVFRHK-DSRGKSPSRRVAVVRLPLAHGSLLMMNHPTYHSLPVRKKVLAPRVNLTF................................................................... 201
59 -11.1004diq_A mol:protein length:489 Lysine-specific demethylase NO66  ali model follow..  13  37.PSSRRRAARLFEWLIAPMPPDHFYRRLWEREAVLVRGLFSTADLDSMLRNHLDAARYINGRRETLNPPGRALPAAAWSLYQAGCSLRLLCPQATTVWQFLAVL----------AGSNVYLTPPNSQGFAPHYDD--------------------AFVLQ-----------LEGRKLWRVYRPRAPTEEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLEAILPLAVQAAMEENVEFRRGL................................... 295
60 -10.9005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  15  10.............................RPGMVLLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCL-VFSKIVKDAIQASNEFLRQKARPANEELPPLSPDICLVNFYTSSGK-LGLHQDKD-----------ETKPSLHKGLPVVSFS---GDTAEFLYGDV--------NDVDKASKVDLESGDVLIFGGKSFHGVSRIKPKTAPRLNLTF................................................................... 228
61 -10.9004y4r_A mol:protein length:454 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66  ali model follow..  13  20IPSSRRRAARLFEWLIAPMPPDHFYRRLWEREAVLVRGLFSTADLDSMLRNHLDAARYINGRRETLNPPGRALPAAAWSLYQAGCSLRLLCPQATTVWQFLAVL---QEQFGSMAGSNVYLTPPNSQGFAPHYDD--------------------AFVLQ-----------LEGRKLWRVYRPRVPTEEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLEAILPLAVQAAMEENVEFRRGL................................... 279
62 -10.9005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  13  42................................IVVLGNVLSDEECDELIELSKSKLARSKVGSSRDVNDIRTSSGA--------------LDDNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDY----FAEHSRSAANNRISTLVMYLNDV--EEGGETFFPKLN---------------LSVHPRKGMAVYFNELTLHGGAPVTKGEK-------WIATQWVRRGTYKPPGP.................................................. 221
63 -10.8005apa_A mol:protein length:220 ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE  ali model follow..  13  47.........................................ERNWKLIRDEGLAVMDKAKGLFLPEDENLREKGDSQFTLWQQGRRNENACKGAPKTCTLLEKF--PETTGCRRGQIKYSIMHPG----------------------------------THVWPHTGPTNCRLRMHLGLVIPKEGCKIRANETKTWEEGKVLIFDDSFEHEV---QDASSFRLIFIVDVWHPELTPQQRRS..................................................... 210
64 -10.7001jr7_A mol:protein length:311 HYPOTHETICAL 37.4 KDA PROTEIN IN ILEY-GABD INTERGENIC REGION  ali model follow..  7  49LRFRVAKILDDLCANQLQPLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAH--------------------------------LIGRSNFDAMSGQYYAR-------VDNSDSYLRQPHRVMELHNDGTYVE---------EITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDNYFRHTSKGILSVPVPVGKFLLINNFWLHGRDRTPHPDLRRELMRQ................................................................... 296
65 -10.7002r6s_A mol:protein length:325 Gab protein  ali model follow..  7  63LRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAH--------------------------------LIGRSNFDAMSGQYYAR-------VDNSDSYLRQPHRVMELHNDGTYVE---------EITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHTSKGILSVPVPVGKFLLINNFWLHGRDRTPHPDLRRELMRQ................................................................... 310
66 -10.7001e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  10  12...........................................DQTRLAPDLAYLAAVPTVEEEYDEFSNGFEDRLYRDLKDAAAQPTAHVEHVPYLKEIVTTVFDGT-----HLQMARSRNLKNAIVIP-HRDFVEL-----------------------DREVDRYFRT----FMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSA--NFS-EISRQSLCVDFAFD.............................................................. 178
67 -10.7004csw_A mol:protein length:406 CUPIN 4 FAMILY PROTEIN  ali model follow..  8  3GLVPRGSHMQLPETILGGLAPEEFLANYWQKRPLLIRSPITPEELAGLACE-ARLILEKGGAYPWEVRYGPFEPEDFVALPPTHWTLLVQEVDRPEVAALLETV---RFVPNWRLDDIMVSYAPEGGTVGAHIDN--------------------VFLVQ-----------AWGRRRWQINHRPVEREEPDAEWILEPGDVLYLPPRIPHYGVALEDCMTFSIGFRAPDQAELAEAMPRMAEITPEALDQIQALLRALI................................... 276
68 -10.5002xdv_A mol:protein length:442 MYC-INDUCED NUCLEAR ANTIGEN  ali model follow..  12  1..SMAAGGPSALNFDSPSSLFESLISPIKTETFF-YGSLFKLTDLKSLCSRVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRDELWRIQEKL---ECYFGSLVGSNVYITPAGSQGLPPHYDD--------------------VFILQ-----------LEGEKHWRLYHPTERIGRPVHEFMLKPGDLLYFPRGTIHQA---DTPAGLAHSTHVTISTYQNNSWGDF--LLDTISGLVFDTAKEDVELRTGIPRQ.......................... 270
69 -10.4002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  12  1........................MQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKD------EPDLRAPIVSVSL-----------GLPAIFQFGGL--------KRNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGFHPRYNLTF................................................................... 199
70 -10.4004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  12  24...........................................DQRRLTDDLAVLAKSNFSSEYSDFACGRWEFCMLRNQSGKQE--TPLGQSLPYLNELLDNHFDRD-----IRYARIIRISENACIIP-HRDYLEL--------------------------EGKFIRV----HLVLDTNEKCSNTEENNIFHMGRGEIWFLDASLPHSA--CFS-PTPRLHLVVDIEGT.............................................................. 186
71 -10.2003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  11  2.........PHMLDLFADAEPWQEP----AAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKD------EPDLRAPIVSVSL-----------GLPAIFQFGGL--------KRNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGFHPRYNLTF................................................................... 212
72 -9.9104o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  9  1.................GQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGEWVHQLVIQKLVEHIPEGFVNSAVINDYQPGGC--VSHVDP-------------IHIFERPIVSVS------FSDSALCFGCKFQF--KPIRVSEPVLSLPVRRGSVTVLSGYA-HCIRPQDIKER-RAVIILRKTRL.............................................................. 215
73 -9.7704qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  15  4..................RGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA--------SMAIMRRVQAAAFGPG--QTLLSSVHVLDLEARGY--KPHVD-------------SIKFCGATIAGLS------LSPSVMRLVH--------TQEPGEWLELLLEPGSLYILRGSA-HE-GERRIPRGRRISVICRSLPEGMGPGE........................................................ 198
74 -9.7004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  11  1.........................QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDKI------HPDLRAPIVSVSL-----------GLPAIFQFGGL--------KRNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGFHPRYNLTF................................................................... 198
75 -9.4904npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  9  18..............................SG-IKQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYF--GPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVNSAVINDYQPGGC--VSHVD-------------PIHIFERPIVSVS------FSDSALCFGCKFLF--KPIRVSEPVLHLPVRRGSVTVLSGYA-HCIRPQDIKER-RAVIIL................................................................... 213
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.