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Query: 5mc6_h mol:protein length:1287 Antiviral helicase SKI2, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSEGFSSSSIQELYQSLKEITNNADVELFEDRITKLDFESTDEPKHANDIIKDRFLRPSNALPWSLLDMVQDVPHTSSPEDCSGKLDYKELLKVPDPINRTSYQFKRTGLEGKISGYKEEVDLKEVANANASNSLSITRSINHNQNSVRGSTAQLPFTPGGIPMKSVKTDSEQNGSSTMANATKLLHKDGQGLFDIPEGMNRGIKPMDSPAENEDQNGQFKELKQLNEIDNELDIRIEANEAKLKEEEKSAKSISEEIMEEATEETTADNADDAEIDELLPIGIDFGRTKPVSKSVPVKKEWAHVVDLNHKIENFDELIPNPARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTPKRPVPLEINIWAKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGSTARGGRGGSNTRDGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNYLRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRLQSQFRLTYNMILNLLRIEALRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEYKSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGFVFKVSLKDAVCVIMTFTKPYKLPNGEPNHLIYFPKADGYRRRNFPKFQKTDFYMEEVPVTAIEVITKRKFAAPLGKVIKKDVAALNEFNAETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAHVIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELVLTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCVFNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYLLast
1 -275.0005mc6_h mol:protein length:1287 Antiviral helicase SKI2  ali model  100  1MSEGFSSSSIQELYQSLKEITNNADVELFEDRITKLDFESTDEPKHANDIIKDRFLRPSNALPWSLLDMVQDVPHTSSPEDCSGKLDYKELLKVPDPINRTSYQFKRTGLEGKISGYKEEVDLKEVANANASNSLSITRSINHNQNSVRGSTAQLPFTPGGIPMKSVKTDSEQNGSSTMANATKLLHKDGQGLFDIPEGMNRGIKPMDSPAENEDQNGQFKELKQLNEIDNELDIRIEANEAKLKEEEKSAKSISEEIMEEATEETTADNADDAEIDELLPIGIDFGRTKPVSKSVPVKKEWAHVVDLNHKIENFDELIPNPARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTPKRPVPLEINIWAKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGSTARGGRGGSNTRDGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNYLRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRLQSQFRLTYNMILNLLRIEALRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEYKSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGFVFKVSLKDAVCVIMTFTKPYKLPNGEPNHLIYFPKADGYRRRNFPKFQKTDFYMEEVPVTAIEVITKRKFAAPLGKVIKKDVAALNEFNAETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAHVIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELVLTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCVFNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287
2 -186.0002xgj_A mol:protein length:1010 ATP-DEPENDENT RNA HELICASE DOB1  ali model follow..  34  1........................................................................................................................................................................................................................................................ENLYFQGAASMLADSFEQEASREVDASKGLTNSETLQVEQDGKVRLSHQVRHQVALPPNYDY-TPIAEHKRVNEARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGD--VGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGIYLVVDEKSTFREENFQKAMASISNQIGDDPNS----------------------------------------TDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMI-DEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLMRVEGISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDEE----NVKEYHEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAKRINKRNPSAVYTDHYIDSPVNLLKPFNPTLPEGIRPAEEGEKSICAVIPITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFGIPVLDPVKNMKIEDEDFLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISEQAVIQLDDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERCKEA--PRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVE--KDYVESFRHELMEVVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLKLIHRDIVSAGSLYL 1004
3 -181.0004qu4_A mol:protein length:1108 ATP-dependent RNA helicase DOB1  ali model follow..  32  5..........................................................................................................................................................IPNPLLGLDSTENLYFQGIDPFTEFMDSTDL-FDVFEETPVELPTDSNGEKNADTNVGDTPDHTQDKKHGLEEEKEEHEENNSENKKIKSNKSKTEDKNKKVVVPVLADSFEQEASREVDASKGLTNSETLQVEQDGKVRLSHQVRHQVALPPNYDYTPIAEHKRVNEARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGD--VGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGIYLVVDEKSTFREENFQKAMASISNQIGDDPNS----------------------------------------TDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMI-DEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLMRVEGISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDEE----NVKEYHEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAKRINKRNPSAVYTDHESDSPVNLLKPFNPTLPEGIRPAEEGEKSICAVIPITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFGIPVLDPVKNMKIEDEDFLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISEQAVIQLDDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERCKEA--PRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVE--KDYVESFRHELMEVVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLKLIHRDIVSAGSLYL 1102
4 -179.0006d6q_M mol:protein length:1045 Exosome RNA helicase MTR4  ali model follow..  32  9.............................................................................................................................................................................................GDELFSVFEGDSTTAAGTKKDKEKDKGKWKGPPGSADKAGKRF------DGKLQSESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQD--VGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGLHLVVDENGDFREDNFNTAMQVLRDAGD--------------------------------------------------LAKGDQKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMV-DEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEE----SVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKRTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEM--PKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDE--ETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1045
5 -177.0005e02_A mol:protein length:1106 FRQ-interacting RNA helicase  ali model follow..  29  1........................................................................................................................................MDDLFEVFEEQPRAQKKRKASPDVEMADGAAAAAPVANAAAAVTHPQAQAAPAPQK---------------DNIDNNDNNNNNTTTSAVQPTIPNGDAAAAADDVQSPQSPHGLGDNKRRKKTDEAEPIMTDAFQTAESREVTGAQGFAPTEGESIVLSHNIQHQVALPPDLDYEYISEHKPPAEPARTYSFKLDPFQALSVASIEREESVLVSAHTSAGKTVVAEYAIAQCLKKNQRVIYTSPIKALSNQKYRDFQAEFGD--VGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKIRGVVWEETIILLPDKVRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPGKGILLIVDEKGNFKENNFNQAMAMIEEKKGTDSND-------------------------------------WSAKQKGKGKNKKTNKGGEAADEKADIAKIIKMILKKNFQPVIVFNFSKRECEQMALASSSMKFNAPDEENMVNKVFENALASLSEDDKNLPQISNILPLLRKGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTQVTKWDGQQRRPLTSSEYIQMAGRAGRRGLDDRGIVIMMV-DDKLEPETARAIVVGNQDKLNSAFHLGYNMVLNLLRIEAISPEYMLERCFFQFQNAASVPQLERELISLQQERDAIIIPDES----IVKDYYGVRQQLEEYNKDMVFVIQHPQNCLGFFQEGRLIHIKSPSGVDYGWGVLIKHIQRQTPKNGQPPYPEQESGDFNPKTRGEGPMPEGIMPAGKDSKNARWEVVPCLLNCLRALGQLRVFLPKRLESADEKDGVGKAVDEISRRFPIPILDPMENMGINDDSFKKLLRKIEVLESRLVANPLHNSPLLVELWNQYSLKMQLGEQIKEKKKAIRAHSVAQLDELKSRKRVLRRLGFINDAEVVQMKARVACEISSGHELLLAELLFNRFFNELSPEICACILSCFIFDEKIETQ---ALKEELAKPFREIQAQARIIAKVSAESKLDVNE--DEYVQSLKWQLMETVLAWAQGRPFSEICKMTNVYEGSLIRLFRRLEELLRQMAEAARVMGSEELKDKFELSLSKIRRDIVSFNSLYL 1106
6 -150.0006c90_A mol:protein length:734 Exosome RNA helicase MTR4,Exosome RNA helicase MTR4  ali model follow..  40  1.................................................................................................................................................................................................................................................................SGDTDEPIFGKKPRIEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQD--VGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKG--------------------------------------------------DQKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMV-DEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSRTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPK--LTEQLAGPLRQMQECAKRIAKVSAEAKLEIDE--ETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 734
7 -60.7002va8_A mol:protein length:715 SKI2-TYPE HELICASE  ali model follow..  26  30........................................................................................................................................................................................................................................................................................................................................KLNPPQTEAVKKLLEGNRLLLTSPTGSGKTLIAEMGISFLLKNGGKAIYVTPLRALTNEKYLTFKD---GFKVAMTSGDYDTDKNYDIIITTYEKLDSLWRHRPEWLNEVNYFVLDELHYLNDPERGPV--ESVTIRAKRRNLLALSATISNYKQIAKWLG------AEPVATNWRPVPLIEGVIYPERKK-------------------------------------------------------------------------KEYNVIFKDNTTKKVHGDDAIIAYTLDSLSKNG--QVLVFRNSRKMAESTALKIANYMNFVSLDENALSEILKQLDDIEEGGSDE----ELLKSLISKGVAYHHAGLSKALRDLIEEGFRQRKIKVIVATPTLAAGVNLPARTVIIGDIYRFNKKYYDEIPIMEYKQMSGRAGRPGFDQIGESIVVVRDKEDVDRVFKKYVLSDVEPIESKLGSERAFYTFLLGISEKQLENFAYESLLAKQLVDVY--FDRAIRWLLEH................................................................................................................................................................................................................................................................................................................................................................................................................................................... 483
8 -60.6002p6r_A mol:protein length:702 afUHEL308 HELICASE  ali model follow..  26  25........................................................................................................................................................................................................................................................................................................................................ELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVPLRALAGEKYESFKK---GLRIGISTGDYESRGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKRGATLEILVTKMNKALRVIGLSATAPNVTEIAEWLD------ADYYVSDWRPVPLVEGVLCEGTL---------------------------------------------------------------------------------ELFDGAFSTSRRVKFEELVEECVAEN--GVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRK---------LAECVRKGAAFHHAGLLNGQRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRSLYRFDG-YSKRIKVSEYKQMAGRAGRPGMDERGEAIIIVGKRDRE-IAVKRYIFGEPERITSKLGVETHLRFHSLSITLEELEDFFADTFFFKQNEISLSYELERVVRQLENWGMVVEAA........................................................................................................................................................................................................................................................................................................................................................................................................................................... 472
9 -60.5005a9j_A mol:protein length:896 DNA POLYMERASE THETA  ali model follow..  20  93........................................................................................................................................................................................................................................................................................................................................KMFEWQAECLLLVLEGKNLVYSAPTSAGKTLVAELLIKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQE-KVDGYMGSTSPSRSLDIAVCTIERANGLILIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKISNAVQIVGMSATLPNLELVASWLN------AELYHTDFRPVPLLESVKVGNSIY-----------------------------------------------------------------------DSSMKLVREFEPMLQVKGDEDHVVSLCYETICDNH--SVLLFCPSKKWCEKLADIIARECPPVILEQKELLEVMDQLRRLPSGLDSVL------QKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFG----GRPLDILTYKQMVGRAGRKGVDTVGESILICKNS--EKSKGIALLQGSLKPVRSCLAILEIIVGGVASTSQ-DMHTYAACTFLAASMKEG................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 568
10 -60.4002zj2_A mol:protein length:720 Putative ski2-type helicase  ali model follow..  24  23........................................................................................................................................................................................................................................................................................................................................SFYPPQAEALKSILEGKNALISIPTASGKTLIAEIAMHRILTQGGKAVYIVPLKALAEEKFQEFQD---GLRVAMATGDYDSKGKYDIIIATAEKFDSLLRHGSSWIKDVKILVADEIHLIGSRDRGATLEVILAHMLGKAQIIGLSATIGNPEELAEWLN------AELIVSDWRPVKLRRGVFYQGFVT----------------------------------------------------------------------------------WEDGSIDRFSSWEELVYDAIRKKK--GALIFVNMRRKAERVALELSKKSLLTKPEIRALNELADSLEENPTNE--------KLAKAIRGGVAFHHAGLGRDERVLVEENFRKGIIKAVVATPTLSAGINTPAFRVIIRDIWRYSDFGMERIPIIEVHQMLGRAGRPKYDEVGEGIIVSTSDDPR-EVMNHYIFGKPEKLFSQLSNESNLRSQVLALTVEEILKFISNTFYAYQRKDT-YSLEEKIRNILYFLLE................................................................................................................................................................................................................................................................................................................................................................................................................................................ 465
11 -55.5006f4a_B mol:protein length:644 Suv3 helicase  ali model follow..  19  133........................................................................................................................................................................................................................................................................................................................TGTDDSVHSVDFSNPAEWFPEAR-----KIRRHIIMHVGPTNSGKTFRSLQKLKAA----DRGYYAGPLRLLAREVYEKFKHENVR--CNLLTGEEVIKDLDE--MGNEANLTSGTIEMIPLNQNFDVVVLDEIQMMADLDRGWAWTNALLGAKAKEVHCCGEASTIP----------------------------------------------------------------------------------------------------------------------------------------LIKKIVEMTGDKLTINEYERMGKLVVEEEALTKGYHSLKKGDCVVAFSKKAILDLKLE---------IEKKTELKAAVIYGSLPPETRVKQANLFNSGEFDILIASDAIGMGLNLSIDRVVFTTSKKFDGRDMVDMTSSAIKQIGGRAGRFKQNIHDNGELPVGYKPNVLKAVREAINAPIEYLTSATTWPTDEICTHVMTRFMPGTTCKTLLETIAADIEQSSNKLFQICDLKARMSAIEIID........................................................................................................................................................................................................................................................................................................................................................................................................................................... 526
12 -54.6003jcr_C mol:protein length:2136 hBrr2  ali model follow..  22  481.........................................................................................................................................................................................................................................................................................................................................LNRIQSKLYRAAETDENLLLCAPTGAGKTNVALMCMLREIGKHIKIIYIAPMRSLVQEMVGSFGKRLATYGITVLTGDHQLCSATQIIVCTPEITRK--GGERTYTQLVRLIILDEIHLLHDD-RGPVLEALVARAQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYV-----------------------------------------------------------------------------------GITEKKAIKRFQIMNEIVYEKIMEHAGKN--QVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLRE--GSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPERWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQ-----LSLLNQQLPIESQMMLNAEIVLGNVQ-NAKDAVNWLGYAYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDK................................................................................................................................................................................................................................................................................................................................................................................................................................. 966
13 -54.4005m59_A mol:protein length:1772 Pre-mRNA splicing helicase-like protein  ali model follow..  19  958.........................................................................................................................................................................................................................................................................................................................................FNKIQTQTFNSLNTDNNVLVAAPTGSGKTVCAEFALLRHWAKKDRAVYIAPFQELVDLRFQDWQKRLSHLRGGKLTGETTTDEQGDLILATPLLSRQ--WKRRKNVQTVELFIADDLHMLGGQ-MGYIYEIVVSRMELPMRIVGLSVSLANARDIGEWID-AKKHDIYNFSPHVRPVPLELHIQ-----------------------------------------------------------------------------------SYTIPHFPSLMLAMAKPTYLAITQLSPDQ--PAIVFVPSRKQTRATARDLLTACLADDDEDRFLHDQIRKLLDHVQEEA--------LAEALSHGVGYYHEALSQSDKRIVKHLYNNGAIQVLIASRDVCWELDFTAHLVVVMGTQFFEGKRYIDYPLSEVLQMFGKALQPSKDGRSRGVLMLPAVKRE-----KKFLNEALPVESHLAFVTEISTKMIE-SGEDAINWATFTY--YRRLLANPSYYGLQDPTHDGLSQYLSDLVETTLKQLSD................................................................................................................................................................................................................................................................................................................................................................................................................................. 1429
14 -54.2005dca_A mol:protein length:1948 Pre-mRNA-splicing helicase BRR2  ali model follow..  20  276......................................................................................................................................................................................................................................................................................................................EITSLPDWCQEAFPSSETTLNPIQSKVFHAAEGDSNMLICAPTGSGKTNIALLTVLKALSHAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVLTGDSRLSDETQVLVSTPETTRN--SNNLAIVELVRLLIIDEIHLLHDD-RGPVLESIVARTQEYPRIIGLSATLPNYEDVGRFLR-VPKEGLFYFDSSFRPCPLSQQFC------------------------------------------------------------------------------------KERNSLKKLKAMNDACYEKVLESINEGN--QIIVFVHSRKETSRTATWLKNKFAEENITHKLTKQILKTEAANVLDPS--------LRKLIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPESWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQSNVQ-------VLNQQLPIESQFNLNAEVVAGNIK-CRNDAVNWLAYTYLYVRMLASPMLYKVPDISSDGQLKKFRESLVHSALCILKE................................................................................................................................................................................................................................................................................................................................................................................................................................. 780
15 -51.6003jcm_N mol:protein length:2163 Pre-mRNA-splicing helicase BRR2  ali model follow..  19 1343.....................................................................................................................................................................................................................................................................................................................................FEFKFNKIQSQVFSLYNSNDSVFVGSGKGTGKTAMAELALLNHWRQNKRAVYINPSGEKIDFLLSDWNKRFSHKIINKLGNDPSLNAKSHVLLATPVQFELLSRRWRQNIQSLELMIYDDAHEISQGVYGAVYETLISRMEKKIRFVCLSNCLANARDFGEWAG-MTKSNIYNFSPSERIEPLEINIQ------------------------------------------------------------------------------------KDVEHISFNFSMLQMAFEASAAAAGNRN--SSSVFLPSRKDCMEVASAFMKFSKAIEWDMLNVEEQIVPYIEKLTDGH--------LRAPLKHGVGILYKGMASNDERIVKRLYEYGAVSVLLISKD-CSAFACKTDEVIILGTNLYDGAEYMPYTINELLEMVGLASGNDSMAGKVLILTSHNMKAYYKKF----LIEPLPTESYLTLNNEIANSIIQ-SKQDCVDWFTYSY--YRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVEFIEIDDTEAEVTAEVNGGDDEATEIISTLSNGLIAS............................................................................................................................................................................................................................................................................................................................................................................................. 1854
16 -48.9003rc3_A mol:protein length:677 ATP-dependent RNA helicase SUPV3L1, mitochondrial  ali model follow..  20  132................................................................................................................................................................................................................................................................................................................................DDLRKISDLRIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAIQKYFSA----KSGVYCGPLKLLAHEIFEKSNAAGVP--CDLVTGEERVGKQASHVSCTVEMC--------SVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGE---PAAIDLVMELMYTTGEEVE-VRDYKRLTPIS-----------------------------------------------------------------------------------------------------LDHALESLDNLRPGD----CIVCFSKN---------------------------------------DIYSVSRQIEIRGLESAVIYGSLPPGTKLAQAKKFNDP-CKILVATDAIGMGLNLSIRRIIFYSLIKPSIRELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHE--DLSLLKEILKRPVDPIAAGLHPTAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCDDFKFSAELIQHIP.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 520
17 -34.3005v9x_A mol:protein length:877 ATP-dependent DNA helicase  ali model follow..  18  15..................................................................................................................................................................................................................................................................................................................NGADPLGRFSALTREWFTTAFAAPTPAQADAWSAISEGNNTLVIAPTGSGKTLAAFLWAIDRLSQGTQVLYVSPLKALAVDVERNLRTPLTG-TVGVRSGDTPPNQRRDVLITTPESLFLML-AARETLTSVRTVIVDEVHAVAATKRGA--ERLDQLLDTPAQRIGLSATVRPPEEVARFLSGQAPTTI-VCPPAAKTFDLSVQV------------------------------------------------------------------------------------PVPDMANLDNNSIWPDVEERIVDLVEAHN--SSIVFANSRRLAERLTSRLNEI-----AERSGIELPAGPNPEVGGGAPAHLMGSGQANGAPPLLARAHHGSVSKEQRAQVEDDLKSGRLRAVVATSSLELGIDMGAVDLVIQ-------------SVASGLQRVGRAGHQGEISQGVLFPKHRTDLIGCAVTVQRMQTGDIE-ANPLDVLAQHTVAVAALEPVDADAWVRRSA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 480
18 -28.1005lst_A mol:protein length:693 ATP-dependent DNA helicase Q4  ali model follow..  17  53.......................................................................................................................................................................................................................................................................................................................................LGHQAFQERAVMRILSGISTLLVLPTGAGKSLCYQLALLYSRRSPCLTLVVSPLLSLMDDQVSGLPPCL---KAACIHSGMT-AAQVHVLMLTPEALGAGGLPPAAQLPPVAFACIDEAHCLSQ---SHNFRPCYLRVCKVLRFLGLTATATR---------RTASDVAQHLAVAEEPDLHGPAPVPTNLHLSV-----------------------------------------------------------------------------------SMDRDTDQALLTLLQGKRFQNLDSIIIYCNRREDTERIAALLRTCLHAAWVPGSGGRAPKTTA-------------------------EAYHAGMCSRERRRVQRAFMQGQLRVVVATVAFGMGLDRPVRAVLHLGLPP---------SFESYVQAVGRAGRDG--QPAHCHLFLQPQGEDLRELRRHVHADSTDFLAVKRL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 422
19 -27.4004a2w_A mol:protein length:936 RETINOIC ACID INDUCIBLE PROTEIN I  ali model follow..  12  247.......................................................................................................................................................................................................................................................................................................................................KKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQRKAKVVFLATKVPVYEQQKNVFKHHFEGYSVQGISGE-KVIEDSDIIVVTPQILVNSFEDGT--LSIFTLMIFDECHNTTGN---HPYNVLM---SQLPQILGLTASVETIEHICSLCSYLDIQAISTVRENIQELPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTIAYVDTLSQNSKKDFGTQNEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDNPQTRTLLFAKTRALVSALKKCME-----------------------------ENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLFKTSKDRLLIATSVADEGIDIVQCNLVV----LYEYSG----NVTKMIQVRGRGRAAG----SKCILVTSK-------------TEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRDSRRKEIKPKVVEG................................................................................................................................................................................................................................................................................................................................................................................................................................................ 809
20 -25.7004gl2_A mol:protein length:699 Interferon-induced helicase C domain-containing protein 1  ali model follow..  13  1..................................................................................................................................................................................................................................................................................................................................GPGAMLQLRPYQMEVAQPALEGKNIIICLPTGCGKTRVAVYIAKDHLDKPGKVIVLVNKVLLVEQLFRKEFQPFLWYRVIGLSGDTQLKKSCDIIISTAQILENSLLNLENGLSDFSLIIIDECHHTNKE---AVYNNIM--VIPLPQILGLTASPGVGEHILKLCANLDAFTIKTVKENLDQ--LKNQIQEPCKKFAIADATRE-FKEKLLEIMTRIQTYCQMSPMSDFGTQPYEQWAIQMEKKAAKEGNRKEKKPLKLDETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLRNTIMEEESARGIIFTKTR----QSAYALSQW---------------------ITENEKFAEVGVKAHHLIGAGHSSEFKPM----NEQKEVIFRTGKINLLIATTVAEEGLDIKECNIVI----RYGLVT----NEIAMVQARGRARADE---STYVLVAHSGSGVIERETVNDFREK-------------MMYKAIHCVQNMKPEEYAHKILELQMQSIMEKKMKTKRNIAKHYKNNPSL............................................................................................................................................................................................................................................................................................................................................................................................................................................ 584
21 -25.5005jaj_A mol:protein length:681 LGP2  ali model follow..  12  7......................................................................................................................................................................................................................................................................................................................................GSELHGYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHLEGGGRVAVLVNKVHLVQQHLEKEFHVLRDAKVTAVSGDSQLAKGSDVVICTAQILQNALLSGEEELTDFSLLVIDECHHTQKEAVYN--VEHILQICANLDTEVIASAQEHAQHLQSHVPQPTKQYDLCQEREQDPF-LKKIMAQIQEHMEMPELPQNFGTQVYEQRIVELENRAAER-NDALLINDTVRMMDAFQCLQQFYADKRDTKDPTERFLATTFEENRATLQALAGDQRYENPRLSKLEEILQEHFQPPGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQ-------------------------HIRAAVLTGSGHSNQAKGMTQNEQQDVITLFRYGELNLLFSTSVAEEGLDIPECNIVV----RYGLMT----NEIAMVQAQGRARAQN---SMYSVLAKANSREVYREQLNESLVG-------------LMERAIRAVQAMPERKYRLKIVELQRNAVLSWQVKEARSSERRQLHDPDD............................................................................................................................................................................................................................................................................................................................................................................................................................................ 556
22 -25.5005aor_A mol:protein length:1293 DOSAGE COMPENSATION REGULATOR  ali model follow..  12  293..........................................................................................................................................................................................................................................KIELDGPPIPLIVNLSRIDSSQQDGEKRQESSVIPWAPPQANWNTWHACNIDEGELATTSIDDLSMDYERSLRDRRQNDNEYRQFLEFREKLP--IAAMRSEILTAINDNPVVIIRGNTGCGKTTIAQYILDDYICSGQNIYVTQPISAISERVARERCEQLG-DTVGVRFESVFPRPYGAILFCTVGVLLRKLEAG---LRGVSHIIVDEIH-----ERDVNSDFLLVILRDMVHVILMSATI-DTTKFSKYFG-----ICPVLEVPGRAFPVQQFF--------------------LEDIIQMTDFVPSAESRRKRKEVEDE------------EQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKN--AILVFLPGWNLIFALMKFLQNTNIFGDTSQYQI-------------------------------LPCH--SQIPRDEQ--RKVFEEGVTKIILSTNIAETSITIDDIVFVIDI-KLFTSHNNLTASKTNLEQRKGRAGR----RPGFCFTLCSRARFQALEDNLTPEMFRTPLHE-------MALTIKLLRLGSIHHFLSKALE--------PPPVDAVIEAEVLLREMRCLDAN-------------DELTPLGRLLARLPIEPR--------GKMMVL---------GAVFGC------------------------------------------------------ADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHV-----------AMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQL---------------------LDLLQQAGFPEECMISHEVDERI-DGDDPVLDVSLALLCLGLYPNITESKAALLHKTSVNCSNLAVT----FPYPFFVFGEKIRTRAVSCKQLSMVSPLQVILFGSRKIDLAANNIV-RVDNW--------LNFDIEPELAAKIGALKPALEITVACDNPSDILRLEEPYAQLVKVVKDL............ 1146
23 -25.5005jc3_A mol:protein length:701 Melanoma differentiation associated protein-5  ali model follow..  13  5......................................................................................................................................................................................................................................................................................................................................DLTLRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKQGKVIVLVNKVPLVEQHLRKEFNPFLWYQVIGLSGDSELKKRYDVIICTAQILENSLLNA--RLSDFSLIIIDQCHHTQKE---GVYNNIM--LIPQPQILGLTASPKAEEHILKICANLDACRIMTVKEHASQLPFKKTVIADDKRRDPFRERIIEIMQDIQKYCQLYPKSEFGSQPYEQWVIREERRAELKRRKTAESDDDEEPLVSKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMETEEPRGIIFTKTRQSALALYHWIMDNPKFEEKAHFLIGAGHNSETKPMTQNEQ---------------------------REVIDK-FRGGSINLLIATTVAEEGLDIKECNIVI----RYGLVT----NEIAMVQARGRARADE----STYALVASSGSGAVEREDVNIFRE--------NMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRKTYKKNPSLIT.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 585
24 -25.0006bu9_A mol:protein length:1724 Dicer-2, isoform A  ali model follow..  12  8.......................................................................................................................................................................................................................................................................................................................................IKPRGYQLRLVDHLTK-SNGIVYLPTGSGKTFVAILVLK---SGGKRALFMCNTVELARQQAMAVRRCTN--KVGFYVGEQGVDKKNQVLVGTAQVFLDMVTQTYVALSSLSVVIIDECHHGTGH---HPFREFMRLFTKLPRVVGLTGVLTNVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRFLMSLKVPKDICCLVFV----------------------ERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIFRDGNANLMICSSVLEEGIDVQACNHVF----ILD-KTFN-----MYVQSKGRARTTE----AKFVLFTADKERE----------KTIQQIYQYRKAHNDIAEYLKDRVLEKTEFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDA........................................................................................................................................................................................................................................................................................................................................................................................................................................... 588
25 -24.9004bpb_A mol:protein length:698 PROBABLE ATP-DEPENDENT RNA HELICASE DDX58  ali model follow..  13  11......................................................................................................................................................................................................................................................................................................................................PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKQKGKVVFFANQIPVYEQNKSVFSKYFEGYRVTGISGATAENENNDIIILTPQILVNNLKKGT-SLSIFTLMIFDECHNTSKQ---HPYNMIM---GPLPQVIGLTASVKTTDEALDYICKLCASDASVIATVKHNLELEQVVYKPQKFFRKVESR-RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQN-----KCILDAFKASGDHNILIATSVADEGIDIAQCNLVI----LYEYVG----NVIKMIQTRGRGRARG----SKCFLLTSN-------------AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 580
26 -24.9006gpg_A mol:protein length:714 Probable ATP-dependent RNA helicase DDX58  ali model follow..  13  23......................................................................................................................................................................................................................................................................................................................................PFKPRNYQLELALPAMKGKNTIICAPTGFGKTFVSLLICEHHLKQKGKVVFFANQIPVYEQQKSVFSKYFEGYRVTGISGATAENENNDIIILTPQILVNNLKKGT-SLSIFTLMIFDECHNTSKQ---HPYNMIM---GPLPQVIGLTASVKNTDEALDYICKLCASDASVIATVKHNLELEQVVYKPQKFFRKVESR---ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQENPETITILFVKTRALVDALKNWIEGNKLSFLKPGILTGRGKTNQNTGMTLPAQ---------------------------KCILDAFKASGDHNILIATSVADEGIDIAQCNLVI----LYEYVG----NVIKMIQTRGRGRARG----SKCFLLTSN-------------AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 590
27 -24.7005zak_A mol:protein length:1922 Endoribonuclease Dicer  ali model follow..  14  42.......................................................................................................................................................................................................................................................................................................................................YTPRKYQVELLEAALD-HNTIVCLNTGSGKTFIAELSYQIRGRNGKRTVFLVNSANQVAQQVSAVRT-HSDLKVGEYSNLEVNATKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSCPRILGLTASILNGKELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTERLLMELEEALNFINDCNISVHSKERDSTLISKQI-VRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKTNILCGIIFV----------------------ERRYTAVVLNRLIKEAGKQD---PELAYISSNFITGHGIGKNQ----FRKQEEVLFRAHETNLLIATSIVEEGVDIPKCNLVV----RFD-TEYR-----SYVQSKGRA--RAPISN-YIMLADTDKIKSFEEDLKTYKAIEKILRNKCRVTINTAIGHINR----CARLPSDPFTHLAPKCRTRELPDGTFYSTLYL.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 669
28 -24.0005n8r_A mol:protein length:944 CG9323, isoform A  ali model follow..  16  152......................................................................................................................................................................................................................................................................................................................................KLPTMKYADDIIQAVRENQVILIVGSTGCGKTTVPQILLDDAISRGCRIICTQPISAIAEWVSYERCESLG-NSVGIRLESRKARERASITYCTTGVLLQQL-QSDPLMHNLSVLILDEIH-----ERSVETDLLMGLLKVILKVILMSATV-REQDFCDYFN-----NCPMFRIEGVMFPVKML----------------YLEDVLSKTNYEFQKFRDRRPKR------------------DPPERRMKHEAMIEPYLRRIRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENE--AILVF------------------LPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPL-----------HSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINS-TNYDIETNIQVTKANTQQRRGRAGR----RPGICYNLFSRAREDRMDDIPTPEILRSKLES-------IILSLKLLHIDDPYRFLQTLIN--------APNPEAIKMGVELLKRIEALDQTGTLTPL................................................................................................................................................................................................................................................................................................................................................................................................................................... 627
29 -24.0003tbk_A mol:protein length:555 RIG-I Helicase Domain  ali model follow..  13  2......................................................................................................................................................................................................................................................................................................................................PLKPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEHHLKQKGKVVFFANQIPVYEQQATVFSRYFEGYNIASISGATSDSEDNDIIILTPQILVNNLNNGA-SLSVFTLMIFDECHNTSKN---HPYNQIM---DPLPQVVGLTASVKTAEEAMQHICKLCAADASVIATVRDNVALEQVVYKPQKISRKVASRKCIISQLMKETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKEEESRVCKALFLYTSHLRKYNDALIISEDAQMTDALNYLKAF--------SNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTGRGRTNRGM----KCVLEAFRASGDNNILIATSVADEGIDIAECNLVI----LYEYVG----NVIKMIQTRGRGRARD----SKCFLLTSS-------------ADVIEKEKANMIKEKIMNESILRLQTWDEMKFGKTVHRIQVNEKL................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 551
30 -23.7005vhe_A mol:protein length:933 DEAH (Asp-Glu-Ala-His) box polypeptide 36  ali model follow..  14  49.............................................................................................................................................................................................................................................................HSVQTKNDKDEEAQISWFAPEDHGYGTEAYIDRDSEYLLQENEPDATLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTVTQFILDNYIERGKRIVCTQPISAISERVAAERAESCGNGNTGYIRLQSRLRKQGSILYCTTGIILQWL-QSDPHLSSVSHIVLDEIH-----ERNLQSDVLMTVVKDLLKVVLMSATL-NAEKFSEYFG-----NCPMIHIPGFTFPVVEYL------------------------LEDIIEKIRYVPEQKEHRSQFKKGFMQGHVNRQEKYYYEAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEE--AILVFLPGWDNISTLHDLLMSQVMFKSDKFIII-----------------------------------HSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDG-THFDTQNNISVSKANAKQRKGRAGR----QPGHCYHLYNSLRASLLDDYQLPEILRTPLEE-------LCLQIKILRLGGIAHFLSRLMD--------PPSNEAVLLSIKHLMELNALDKQEELTPL................................................................................................................................................................................................................................................................................................................................................................................................................................... 605
31 -23.6005ivw_V mol:protein length:782 TFIIH basal transcription factor complex helicase XPB subunit  ali model follow..  14  311....................................................................................................................................................................................................................................................................................................................................KPTAVLRPYQEKSLRKMGRARSGVIVLPCGAGKSLVGVTAAC---TVRKRCLVLGNSAVSVEQWKAQFKMWSTDSQICRFTSD-DKPIGCSVAISTYSMLGHTTKRSWEAERVMELMILDEVHTIP----AKMFRRVLTIVQAHCKL--LTATLVREDDKIVDLNFLIGPKLYEANWME----QNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNP------------------------------------------------------------NKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGE--------------------------------------------MQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSR-------RQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVI-DLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKR........................................................................................................................................................................................................................................................................................................................................................................................................... 779
32 -23.5004qqw_A mol:protein length:964 CRISPR-associated helicase, Cas3 family  ali model follow..  12  292.......................................................................................................................................................................................................................................................................................................................................SKPNGLQASLAKHLPCLCTVLITAPMGEGKT---EAAYHVADLGRPGRFLALPTMATADQMHTRLKEYARSSTLALLHSMAWLNPDAPWAVGTIQALMAVLRAKHNALRLFGLVVVDEAHAV-DPYMQVLLEQLLRWLGTLVPVVLLSATLH---------------------HSIANSLVKAY----------------------------LEGARGRRWNRSEPQPVSEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRKPLEVRLVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIIC--------------------TTVAEAQGVYDLLSQWFATLGEDAPD--------------LYLLHSRFPNRQRTEITATIVDLFGKVLVATQVVEQSLDLDV-DLMISDLAPVS-----------LLQRAGRCWRHEHLGIIELVVLTPEQNGDADRAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPVDVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLAR.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 810
33 -23.2001gm5_A mol:protein length:780 RECG  ali model follow..  16  355...........................................................................................................................................................................................................................................................................................................................GKLAEEFIKSLPFKLTNAQKRAHQEIRNDMI-LLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSK-HVALLIGATT-NGQIDVVIGTHALIQEDV-----HFKNLGLVIIDEQHRF-----GVKQREALMNKGKMVDTLVMSAT---------------------------PIPRSMALAFYGDL------------------------------------------------------------------------------------------------VTVIDEM-PPGRKEVQTMLVPMDRVNEVYEFVRQ-EVMRGGQAFIVYPLIEES------DKLNVKSAVEMYEYLSKELGLMHGRLSQEEKDRVMLEFAEGRYDILVSTTVIEVGIDVPANVMVIENPERFG---------AQLHQLRGRVGR---GQEAYCFLVVGDVGEEAMERLRFFTLN----TDGFKIA---------------YDLKTRGPGEFFGVKQHGLSGFKVADLYRDLKLLEWAREDV........................................................................................................................................................................................................................................................................................................................................................................................................................................ 760
34 -22.9001wp9_A mol:protein length:494 ATP-dependent RNA helicase, putative  ali model follow..  15  8.......................................................................................................................................................................................................................................................................................................................................IQPRIYQEVIYAKCKE-TNCLIVLPTGLGKTLIAMMIAEYRLTKGGKVLMLAPTKPLVLQHAESFRRLFNPEKIVALTGEKSPEARAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNPLVIGLTASGSTPEKIMEVINNLGIEHIEYRSENSPDV-LRDALKPLAETGLLESSSPDIPKKEVLRAGQIINEEMAKGNHDLRGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAISLLVQIREQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKR-------------------------------FVGQASKENDRGL----REQKLILFARGEFNVLVATSVGEEGLDVPEVDLVV----FYEPVP----SAIRSIQRRGRTGRH---MPGRVIILMAKGTRDEAYYWSSRQKEK.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 490
35 -22.9004on9_A mol:protein length:580 Probable ATP-dependent RNA helicase DDX58  ali model follow..  14  21......................................................................................................................................................................................................................................................................................................................................PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKQKGKVVFFANQIPVYEQQKSVFSKYFEGYRVTGISGATAENENNDIIILTPQILVNNLKKGTPSLSIFTLMIFDECHNTSKQ---HPYNMIM---GPLPQVIGLTASVKNTDEALDYICKLCASDASVIATVKHNLELEQVVYKPQKFFRKVESR---ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRKLQELESVSRDPSNENPKLEDLCFILQENPETITILFVKTRALVDALKNWIEGNKLSFLKPGILTGRGKTNQNTGMTLPAQ---------------------------KCILDAFKASGDHNILIATSVADEGIDIAQCNLVI----LYEYVG----NVIKMIQTRGRGRARG----SKCFLLTSN-------------AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKF................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 570
36 -22.7004cdg_A mol:protein length:673 BLOOM SYNDROME PROTEIN  ali model follow..  18  30.......................................................................................................................................................................................................................................................................................................................................FGLHNFQLEAINAALLGEDCFILMPTGGGKSLC--YQLPACVSPGVTVV-ISPLRSLIVDQVQKLTSL--DIPATYLTGDKTDSEATNIYLSKKDPIIKLLYVTPEKICALARFVIDEAHCVSQ------WGHMLRQKFPSVPVMALTATANPRKDILTQLK--ILRPQVFSMSFNRH--LKYYV---------------------------------------------------------------------------------------------LPKKPKKVAFDCLEWIRKH---SGIIYCLSRRECDTMADTLQR-----------------------------------------DGLAAYHAGLSDSARDEVQQKWNQDGCQVICATIAFGMGIDKPVRFVIHASLPK---------SVEGYYQESGRAGRDGEISHCLLFY----TYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCENITRIQLLAYFGE....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 414
37 -22.6003i5x_A mol:protein length:563 ATP-dependent RNA helicase MSS116  ali model follow..  11  5................................................................................................................................................................................................................................................NDGNRDQRNFGRNQRNNNSNRYRNSRFNSRPRTRSREDDDEVHFDKTTFSKLIHVPKEDNSKEVTLDSLLEEGVLDKEIHKAITRMEFPLTPVQQKTIKPISEDHDVIARAKTGTGKTFA--FLIPIDSQYMVKAVIVAPTRDLALQKIHDMNYGLKKYACVSLVGGTDFRAAPNIVIATPGRLIDVLEKYSKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEK-KTLLFSATLDD--KVQKLANNIMNKKECLFLD-------------------TVDKNEPEAHERIDQSVVISEKFANSIFAAVEHI--------------------------------------------------------------KKQIKERDSNYKAIIFAPTVKFTSFLCSILKNE--------------------------------------FKKDLPI-HGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQ-------------ELANYIHRIGRTARSG--KEGSSVLFICKDELPKSEVLEAVTEEPEDISDIVISLISSYRSCIKEYRFSERRILPEIASTYGVLLNDPQLKIPVSRRFLDKLGLSRSPIGKAMFEIRDY................................................................................................................................................................................................................................................................................................................................................................................................................................ 563
38 -22.6005sva_Z mol:protein length:843 DNA repair helicase RAD25  ali model follow..  13  353................................................................................................................................................................................................................................................................................................................................DIDLKPSTQIRPYQEKSLSKMGRARSGIIVLPCGAGKTLVGITAAC---TIKKSVIVLCTSSVSVMQWRQQFLQWCTPENCAVFTSDNK-QTESGLVVSTYSMVANTRNRSHDS-REWGFIILDEVHVVP----AAMFRRVVSTIAAHAKL--LTATLVREDDKIGDLNFLIGPKLYEANWME---------LSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLLY-----------------------------------------------------IMNPTKFQACQFLIQYHERRG--KIIVFSDNVYALQEYALKMGKPFIYGSTPQQE--------------------------------------------MNILQNFQYNDQINTIFLSKVGDTSIDLPEATCLIQISSHYGSR-------RQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSTKRQAFLVDQYAFK-NLAYASPRERRELLQEVLLKN-ADNSVGRGSNGHKRFKSKAVRGEGSLSGLAGGEDMAYMEYSTNKNKELKEHHPLIRKMYYKNLK......................................................................................................................................................................................................................................................................................................................................................................................................... 842
39 -22.4004a4k_A mol:protein length:256 ANTIVIRAL HELICASE SKI2  ali model follow..  98  2..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................PDSMKETLQPEHEKQIKVLQEELQTIEYKSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGFVFKVSLKDAVCVIMTFTKPYKLPNGEPNHLIYFPKADGYRRRNFPKFQKTDFYMEEVPVTAIEVITKRKFAAPLGKVIKKDVAALNEFNAETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAHVIKKKIEELYHLMSDQN.......................................................................................................................................................................................................... 256
40 -22.3005vha_A mol:protein length:870 DEAH (Asp-Glu-Ala-His) box polypeptide 36  ali model follow..  14  55..................................................................................................................................................................................................................................................................................................................................RFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTVTQFILDNYIERGKRIVCTQPISAISERVAAERAESCGNNSTGYIRLQSRLRKQGSILYCTTGIILQWL-QSDPHLSSVSHIVLDEIH-----ERNLQSDVLMTVVKDLLKVVLMSATL-NAEKFSEYFG-----NCPMIHIPGFTFPVVEYL------------------------LEDIIEKIRYVPEQKEHRSQFKKGFMQGHVNRQEKYYYEAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEE--AILVFLPGWDNISTLHDLLMSQVMFKSDKFIII-----------------------------------HSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDG-THFDTQNNISVSKANAKQRKGRAGR----QPGHCYHLYNSLRASLLDDYQLPEILRTPLEE-------LCLQIKILRLGGIAHFLSRLMD--------PPSNEAVLLSIKHLMELNALDKQEELTPL................................................................................................................................................................................................................................................................................................................................................................................................................................... 542
41 -22.2003sqw_A mol:protein length:579 ATP-dependent RNA helicase MSS116, mitochondrial  ali model follow..  14  27.........................................................................................................................................................................................................................................................................................................................VLDKEIHKAITRMEFPLTPVQQKTIKPISEDHDVIARAKTGTGKTFA--FLIPIDSQYMVKAVIVAPTRDLALQKIHDMNYGLKKYACVSLVGGTDFRAAPNIVIATPGRLIDVLEKYSKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEK-KTLLFSATLDD--KVQKLANNIMNKKECLFLD-------------------TVDKNEPEAHERIDQSVVISEKFANSIFAAVEHI--------------------------------------------------------------KKQIKERDSNYKAIIFAPTVKFTSFLCSILKNE--------------------------------------FKKDLPI-HGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQ-------------ELANYIHRIGRTARSG--KEGSSVLFICKD--ELPFVRELEDAKNIVIAKQ.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 417
42 -22.1004s20_K mol:protein length:974 RNA polymerase-associated protein RapA  ali model follow..  12  152.......................................................................................................................................................................................................................................................................................................................................TSLIPHQLNIAHDVRHAPRVLLADEVGLGKTIEAGMILHQQLLSGERVLIIVP-ETLQHQWLVEMLRRFN--RFALFDDERYAEDTEQLVICSLDFARR---QRLEHLCEAEWLVVDEAHHLVWSEDAPSREYQAILAEHVPGVLLLTAT-LGMESHFARLRLLDPNRFQFVEEQKNYCPVADAMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDDNATWWNFDPRVEWLMGYLTSHRSQKVLVIC----------------------AKAATALQLEQVLREREGIR----------------AAVFHEGMSIIERDRAAAWFAEE-AQVLLCSEIGSEGRNFQFASHMVM----FD-------NPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEG-----LDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD................................................................................................................................................................................................................................................................................................................................................................................................................... 712
43 -21.8002v1x_A mol:protein length:591 ATP-DEPENDENT DNA HELICASE Q1  ali model follow..  19  40.......................................................................................................................................................................................................................................................................................................................................FKLEKFQLETINVTMAGKEVFLVMPTGGGKSLC--YQLPALCSDGFTLV-ICPLISLMEDQLMVLKQL--GISATMLNASSS-NSELKLIYVTPEKIAKSRLEKAYEARRFTRIAVDEVHCCSDFRPDYKALGILKRQFPNASLIGLTATATNHTDAQKILC--IEKCFTFTASFNRP--LYYEV-------------------------------------------------------------------------------------------RQKPSNTEDFIEDIVKLINGR---SGIIYCFSQKDSEQVTVSLQN-----------------------------------------LGIHAYHANLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPVRFVIHHSMSK---------SMENYYQESGRAGRDDMKAD----CILYYGFGDIFRISSMVVMENVGQQKLYE-----MVSYCQNISKCRRVLMAQHFDE....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 417
44 -21.4004tmu_A mol:protein length:541 RecQ  ali model follow..  18  35.......................................................................................................................................................................................................................................................................................................................................FGYQQFQATIIDAVLEGRDCLVVMPTGGGKSLC--YQIPALVKTGLTIV-VSPLISLMKDQVDQLLAN--GVAAACLNSTQS-TGQVRLLYIAPERLMMDNFIDTLGYWDLAMVAVDEAHCISQ------WGHQLRARFPAVPFMALTATADDTTR-RDIVRLLGLDDPLIEISSFDRPNIRYML-----------------------------------------------------------------------------------------------MEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQS-----------------------------------------RGISAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPVRFVVHFDIPR---------NIESYYQETGRAGRDGLPAEAMLFY----DPADMAWLRRCLEEKAPGPLQDIERHLNAMGAFAEAQTCRRLVLLN--FGE....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 405
45 -20.9004q2c_A mol:protein length:949 CRISPR-associated helicase Cas3  ali model follow..  12  306.......................................................................................................................................................................................................................................................................................................................................RQPTTVQAAAEELAGEVKSTIIEAPMGEGKTEAA-LADTFSTAHGSGCYFALPTMATSNQMFGRVTDYLRVVVVNLVHGHSDLSALPPYGVGTVQALLAVLQVKHVFVRLFALVIVDEVHAYDVYMTTLLHRLLEWLGALSVPVVVLSATLPSARRVKAYARGAGWQAERDLPPAGYPR-----------------------------------------------------------------------TYAAAEDVRGIHFAPSEASRRKVALRWVSAPEHEALGQLLAEALSQGGCAAIIC--------------------NTVPRAQALYSALREVFPGLAEDGMP-------------ELDLLHARYPYEEREVREARTLGRFSRILVATQVIEQSLDLDF-DLMVTDLAPVD-----------VLQRMGRLHRHPVHDPLELWVVSPQVMGDVPIFEHTLLRSWLALRDRDTLQL----------PEDIEELVEQVYSDGRVPQGASEELRSLWERTFK................................................................................................................................................................................................................................................................................................................................................................................................................................................... 794
46 -20.9002fwr_A mol:protein length:472 DNA repair protein RAD25  ali model follow..  15  78...............................................................................................................................................................................................................................................................................................................................PTPYFDAEISLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAIN---ELSTPTLIVVPTLALAEQWKERL-GIFGEEYVGEFSGRI--KELKPLTVST---YDSAYVNAEKLGNRFMLLIFDEVHHLPAES----YVQIAQMSIAPFRL--LTATFEREDGRHEILKEVVGGKVFELFPDS----LAGKHLAKYTIKRIFVPLAEDERVEYEKREKVYKQFLRARGITLRRAEDFNKIV-----------------------MASGYDERAYEALRAWEEARRIAFNSKNKIRKLREILERHRKDKIIIFTRHNELVYRISKVFLIPAITHRTSREEREEILEG--------------------------------------------FRTGRFRAIVSSQVLDEGIDVPANVGVIMSGSG---------SAREYIQRLGRILRPSKGKKEAVLY.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 442
47 -20.7001oyw_A mol:protein length:523 ATP-dependent DNA helicase  ali model follow..  19  21.......................................................................................................................................................................................................................................................................................................................................FGYQQFQEEIIDTVLSGRDCLVVMPTGGGKSLC--YQIPALLLNGLTVV-VSPLISLMKDQVDQLQAN--GVAAACLNSTQT-TGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQ------WGHQLRQRFPTLPFMALTATADDTQDIVRLLG--LNDPLIQISSFDRP--IRYML-----------------------------------------------------------------------------------------------MEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQS-----------------------------------------KGISAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPVRFVVHFDIPR---------NIESYYQETGRAGRDGLPAEAMLFY----DPADMAWLRRCLEEKPQGQLQDIERHLNAMGAFAEAQTCRRLVLLN--FGE....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 391
48 -20.5003p4y_A mol:protein length:415 reverse gyrase helicase domain  ali model follow..  14  8..........................................................................................................................................................................................................................................................................................................................YEDFRSFFKKKFGKDLTGYQRLWAKRIVQGKSFTMVAPTGVGKTTFGMMTALWLARKGKKSALVFPTVTLVKQTLERL-QKLADEKVKIFYSSMKKEEDYHILVFSTQFVSKNREK---SQKRFDFVFVDDVDAVLKASRNIDTLLMMVGIPEEIIRKAFSTIKQG--KIYERPKNLKPGILVVSSATAKPRGIRPLLFRDLLNFTV--GRLVSVARNITHVRISSR--------------------------------------------------------------------SKEKLVELLEIFRDG----ILIFAQTEEEGKELYEYLKRFKFNVGETWSEFEKNFED--------------------------------------------FKVGKINILIGVQAYTRGVDLPIKYVIFWGTPSGP-------DVYTYIQASGRSSRILNGVLVKGVSVIFEE--DEEIFESLKTRLLLIAEEEIIEEAEANWKELVHEVEESRRRSERELTDTSR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 415
49 -20.3005suq_A mol:protein length:446 ATP-dependent RNA helicase SUB2  ali model follow..  15  2.......................................................................................................................................................................................................................................................SHEGEEDLLEYSDNEQEIQIDASKAAEAGETGAATSATEGDNNNNTAAGDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFE-SEVQQHTIPQSIHGTDVLCQAKSGLGKT--AVFVLSTLQQGEVAVVVICNARELAYQEYLRFSKYMPDVKTAVFYGGTPISKDPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEEL-----QEIFRATPRDKQVMMFSATLSQ--EIRPICRRFLQNPLEIFVDDEAKLTLH----------------------GLQQYYIKLEEREKNRK--------------------------------------------------------------------LAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAIT----------------------------------------HGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAIN----YD-------EADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFP...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 434
50 -20.3005z3g_Y mol:protein length:505 ATP-dependent RNA helicase HAS1  ali model follow..  16  2...........................................................................................................................................................................................................................................................................ATPSNKRSRDSESTEEPVVDEKSTSKQNNAAPEGEQTTCVEKFEELKLSQPTLKAIEKMGFTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLA--FLIPAKPRNGTGIIVITPTRELALQIFGVAREEFHSQTFGIVIGGANRRQEANMLIATPGRLLDHLQNTKGFFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRSMLFSATQTTKVE-----------DLARISLRPGPLFIN-----------VVPETDNSTADGLEQGYVVCDSDKRFLL--------------------------------------------------------------------LFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLE----------------------------------------HGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWII----QFD-------DPRDYIHRVGRTARGT-KGKGKSLMFLTPN--ELGFLRYLKASKEYEFPENKIANVQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHSLKTVYQIDKLDLAKVAKS............................................................................................................................................................................................................................................................................................................................................................................................................................................ 476
51 -20.3005tnu_A mol:protein length:459 DNA-dependent ATPase XPBII  ali model follow..  17  66........................................................................................................................................................................................................................................................................................................................ENVIDSLPFPLIKDKIELRDYQAEAVKAWLKEKRGIIVLPTGAGKTQV---ALKIVSIMKVATLIVVPTIDLITQWKERINK-YLDFDPGIIGGG---DSLKGITVIT---YDSAYTRAEELGNKFPLLIFDEVHHLPSEG----YSIMAQLFASPYRL--LTATPERDDGKHELYPILVGPIVYRKSVEE----LAGKYIAKYKIKKLYVSLTNEEKKRYDGLRKKLKDFLSSRGLKLQNLDDFHRLVK-----------------------LAAKDKEAREALLAWHESLNIAVNSQSKIEKLREILQEYKNEKIIVFTRDTQMAYRISKTFLIPVVTYKTDKDEREEILQK--------------------------------------------FRDGEYRVIVASTVFDEGVDVPATLAIVMGGYG---------TKRQFLQRLGRILRKKDKEALLIEIV............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 438
52 -20.2005lb8_A mol:protein length:518 ATP-dependent DNA helicase Q5  ali model follow..  18  16.......................................................................................................................................................................................................................................................................................................................................FGFDSFQESATMAVKGNKDVFVCMPTGAGKSLC--YQLPALLAKGITIV-VSPLIALIQDQVDHLLTL--KVRVSSLNSKLS-KPQTKILYITPEMAAS-TLNSLVSRHLLSYLVVDEAHCVSQ---GHDFRPDYLRL-GHAPCVALTATATPQEDVFAALH-LKKPVAIFKTPCFRA--LFYDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCG------------------------------------------------------------------------------------IVYCRTREACEQLAIELSC-----------------------------------------RGVNAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKAVRFVAHWNIAK---------SMAGYYQESGRAGRDGKPSWCRLYY----SRNDRDQVSFLIRKEVAKLQEK-IMAFDALVTFCEELGCRHAAIAK--FGD....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 414
53 -19.9004q47_A mol:protein length:525 DNA helicase RecQ  ali model follow..  19  20.......................................................................................................................................................................................................................................................................................................................................WGYPAFQGEIVQQVAEGGNALVLMPTGGGKSLC--YQLPSLLRPGTGIV-VSPLIALMKDQVDTLRQN--GVRAAFLNSTLL-RGDLDLLYVAPERLLMPRTLDLLERAPVALFAIDEAHCVSQ------WGHVLAERFPELPRVALTATADERTR-ADIKSVLRLEDAPQFVSSFDRPNIQYRV-----------------------------------------------------------------------------------------------GLKDSPKTQLLHFIREEH--AGIVYCLSRKSVEETAKWLQA-----------------------------------------QGIDAYHAGLSSTERNNVQERFLNEEGVIVCATVAFGMGIDKPVRFVAHLDLPK---------SMEGYYQETGRAGRDGLPSTAWMVYGLSDVVNVRRMLAQ--SDAPEEVKRVEASKLDALLTYCEAATCRRQVLLH--FGE....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 392
54 -19.8005zwn_y mol:protein length:588 Pre-mRNA-splicing ATP-dependent RNA helicase PRP28  ali model follow..  16  182...........................................................................................................................................................................................................................................................................................................................RDLLRVIIQELRFP-TPIQRITIPNVKQYRDFLGVASTGSGKTLA--FVIPILIKDGPKALILAPTRELVQQKVTKIWSKESNYDC-SIVGGHSLEEICDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMID------FEDQVTNILTKVQTLMFTATMT--------------PVIEKIAAGYMQKPVYATI-----------GVETGSEPLIQQVVEYADNDEDKF--------------------------------------------------------------------KKLKPIVAKYDPPIIIFINYKQTADWLAEKFQK----------------------------------------ETNMKV-HGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVN----FQISKKMD----DYIHRIGRTGRAANEGTAVSFVSAAEDESLIRELYKYVRKHDPLNSNIFS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 569
55 -19.7004kbf_A mol:protein length:365 Heat resistant RNA dependent ATPase  ali model follow..  18  26...........................................................................................................................................................................................................................................................................................................................................PIQAAALPLALEGKDLIGQARTGTGKTIAERLAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAVYGGTGYGKQADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLLFSATLPS--WAKRLAERYMKNPVLINVIKDEPVTYEEEAVP----------------------------------------------------------------------------------------------PVRGRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHPAQA----------------------------------------HGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVH----YR-------RAEAYQHRSGRTGRAG--RGGRVVLLYGRERRDVEALERAVGRRFKRVN...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 365
56 -19.4005gm6_Y mol:protein length:876 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2  ali model follow..  13  109.....................................................................................................................................................................................................................ENETKYASSNSKFNVEVTHKIKNAKEIDKINRQRMWEEQQLRNAMAGQSDHPDDITLEGSDKYDYVFDTDAMIDYTNEEDDLLPEEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTLPQYLVEDGFTDQGKLQITQPRRSVAARVADEMNVVLGKE-VGYIRFEDKTTPNKTVLKYMTDLLREFL--TDSKLSKYSCIMIDEAHLATDILIGLLKD--ILPQRPTLKLLISSATM-NAKKFSEFF-----DNCPIFNVPGRRYPVD--------IHYTLQPEANYIHAAITTIFQI--------------------------------------------------------------------------------HTTQSLPGDILVF------------------LTGQEEIERTKTKLEEIMSKLGSRTKQMI-------------------ITPIYANL-LKIFQENCRKVVLATNIAETSLTIDVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVG---PGKCFRIFTKW----SYLHELELMPKPEITRT-----NLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYIL...................................................................................................................................................................................................................................................................................................................................................................................................................................................... 626
57 -19.4006eud_A mol:protein length:812 ATP-dependent RNA helicase HrpB  ali model follow..  14  6......................................................................................................................................................................................................................................................................................................................................SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGINGKIILLEPRRLAARNVAQRLAELLNEDTVGYMRAQNCVGPNTRLEVVTEGVLTRMIQRDPE-LSGVGLVILDEFH-LQADLALALLLDVQQGLRDDLKLLIMSATL-DNDRLQQMLP-----EAPVVISEGRSFPVERRY-----------------------------------------------------------------------------------------LPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLAS----------------------------RIGSDVLLCPL--------YGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCVARFDPRT-QRVSQASMTQRAGRAGRLE---PGISLHL------AKEQAERAAAQSEPEILQS-----DLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQML...................................................................................................................................................................................................................................................................................................................................................................................................................................................... 399
58 -19.3004ct4_B mol:protein length:378 PROBABLE ATP-DEPENDENT RNA HELICASE DDX6  ali model follow..  16  11.........................................................................................................................................................................................................................................................................................................................CLKRELLMGIFEMGWE-SPIQEESIPIALSGRDILARAKNGTGKS--GAYLIPLLERDNIQAMVIVPTRELALQICIQVSKHMGGAKVMATTGGTNLRDDVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPL--SVQKFMNSHLQKPYEINLMEELTLKVTQYYAY----------------------------------------------------------------------------------------------TERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFY----------------------------------------HAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN----FD-------LAETYLHRIGRSGRFG--HLGLAILITYDDRFNLKSIEEQLGTEIKPIPSNIDKS................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 376
59 -19.3002z0m_A mol:protein length:337 337aa long hypothetical ATP-dependent RNA helicase deaD  ali model follow..  20  1..........................................................................................................................................................................................................................................................................................................................MNEKIEQAIREMGFK-TEVQSKTIPLMLQGKNVVVRAKTGSGKT--AAYAIPI-LELGMKSLVVTPTRELTRQVASHIRDRYMDTKVAEVYGGMPYKAQADIVVATPGRLLDLWSKGVIDLSSFEIVIIDEADLMFEMGFIDDIKIILAQTSNRKITGLFSATIPE--EIRKVVKDFITNYEEIEACIGLANVEHKFVHVKDDWRS------------------------------------------------------------------------------------------------KVQALRENKDKGVIVFVRTRNRVAKLVRLFDNAIEL-------------------------------------------RGDLPQSVRNRNIDAFREGEYDMLITTDVASRGLDIPLVEKVIN----FD-------DLRTYIHRIGRTGRMG--RKGEAITFILNEYWLEKEVKKVS.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 334
60 -19.1006dgd_A mol:protein length:751 Primosomal protein N`  ali model follow..  16  209......................................................................................................................................................................................................................................................................................................................................RLRLNTEQATAVGAIHSASAWLLAGITGSGKTEVYLSVLENVLAQGRQALVMVPEIGLTPQTIARFRQRFNA-PVEVLHSGLN-NGEAAIVIGT----RSSLFT----FKDLGVIVIDEEHYKQQEGWRYHARDLAVWRAHSEQIIILGSATPALETLHN----VRQGKYRQLTLSKRRPA-----------QHVLDLKGQPLQAGLSPALISRMRQHLQADN------------------------------------------------------------------QVILFLNRRGFAPALLWIAECPRCD--------SYYTLHQAQHHLR----HHCDSQRPIPRQCPSCGS-THLVPVGIGTEQAPLFP-LEEHLAA-VHRGGARILIGTQMLAKGHHFPDVTLV---LDVDGALFSADFRSAEYTQVSGRAGRA--GKQGEVIL--QTHHPEHPLLQTL-------LYKGYDAFAEQALAERQTMQLPPWTSHVLIRAEDHNNQQAPLFLQQLRNLLQAS.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 676
61 -19.1003eiq_A mol:protein length:414 Eukaryotic initiation factor 4A-I  ali model follow..  14  1.................................................................................................................................................................................................................................................................................GPLGSPEFMSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMLLRGIYAYGFE-SAIQQRAILPCIKGYDVIAQAQSGTGKT--ATFAISILQQKATQALVLAPTRELAQQIQKVVMADYMGASCHACIGGTNVRAEPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPS--DVLEVTKKFMRDPIRILVKKEELT-IRQFYIN---------------------------------------------------------------------------------------------EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSA----------------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN----YD-------NRENYIHRIGRGGRFG--RKGVAINMVTEE--DKRTLRDIETFYNTSIEEMPLNVADLI............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 414
62 -19.0002hyi_C mol:protein length:413 Probable ATP-dependent RNA helicase DDX48  ali model follow..  18  44.........................................................................................................................................................................................................................................................................................................................GLREDLLRGIYAYGFE-SAIQQRAIKQIIKGRDVIAQSQSGTGKT--ATFSISVLQCRETQALILAPTRELAVQIQKGLLADYMNVQCHACIGGTNVGEDQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPH--EILEMTNKFMTDPIRILVKRDELT-IKQFFVA---------------------------------------------------------------------------------------------EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSS----------------------------------------HGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIIN----YD-------NRELYIHRIGRSGRYG--RKGVAINFVKND--DIRILRDIEQYYSTQIDEMPMNVADLILE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 413
63 -19.0001xti_A mol:protein length:391 Probable ATP-dependent RNA helicase p47  ali model follow..  17  15..........................................................................................................................................................................................................................................................................................................................LKPELLRAIVDCGFE-SEVQHECIPQAILGMDVLCQAKSGMGKT--AVFVLATLQQGQVSVLVMCHTRELAFQEYERFSKYMPNVKVAVFFGGLSIKKDPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQL-----QEIFRMTPHEKQVMMFSATLSK--EIRPVCRKFMQDPMEIFVDDETKLTLHGL------------------------------------------------------------------------------------------QQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIA----------------------------------------HRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFN----YD-------DSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDIS................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 384
64 -19.0005wx1_A mol:protein length:733 Serine protease NS3  ali model follow..  13  252.............................................................................................................................................................................................................................................................................................................................................MVKKITTMNRGEFRQITLATGAGKTTELPRSVIEEIGRHKRVLVLIPLRAAAESVYQYMRQKHPSIAFNLRIGEMKEGDMATGITYASYFCQMPQPKLRAAMVEYSFIFLDEYHCATPEQLAIM---KIHRFSENLRVVAMTATPAG-----------------TVTTTGQKHPIEEFI--------------------------------------------------------------------------------------APEVMKGEDLGSEYLDIAGLKIPVEEMKSNMLVFVPTRNMAVETAKKLKAKGYN---------------------------------------SGYYYSGE----PSNLRVVTSQS--YVVVATNAIESGVTLPDLDVVVDTEKRIRGLKRMAVTIGEQAQRRGRVGR----KPGRYYRSQETPVGSKDYHYDLLQAQRYGIEDGINITKSFREMNYDWSLYEEDSLMITQLEILNNLLISEELPMAVKNIMARTD................................................................................................................................................................................................................................................................................................................................................................................................................................................. 637
65 -18.9005gqh_A mol:protein length:1090 CRISPR-associated nuclease/helicase Cas3 subtype I-F/YPEST  ali model follow..  10  397..................................................................................................................................................................................................................................................................................................................................QPRFRWQDKAYDCAMACREQAMEHGLNLASTGCGKTLANRILYALADPQRGARFSIAGLRSLTLQTGQAYRERLGDDDLAILVGGSAAR--APILACTIDLMPASE-GGHQIAPLLRLLVLDEVD---DIDDLPALSRLVHWAGLFSRVLLSSATLPPALVFEAYRSGREIFQRHRGAPGRATEIRCAWFDEFSSQSSAHGAVTSFSEAHATFVAQRLAKLEQLPPRRQAQLCTVHAAGEARPALCRELAGQMNTWMADLHRCHHTEHQGRRISFGLLRLANIEPLIELAQ--AILAQGAPEGLHVHLCVYHSR----------------PLLVRSAIERQLDELLKRSDDDAAALFA--------------------PTLAKALQASTERDHLFVVLASPVAEVGRDHDYDWAIVE------------PSSMRIIQLAGRIRRHRSGFSGEANLYLLSRNIRSLEGQNPAFQRPGFETPDFPLDSHDLHDLL---DPALLARIDASPRIVEPFPLFPRSRLVDLEHRRLRALMLADDPPSSLLGVPLWWQTPASLSGALQTSQPFRAGAKERCYAL.................................................................................................................................................................................................................................................................................................................................................................................................... 992
66 -18.9002oca_A mol:protein length:510 ATP-dependent DNA helicase uvsW  ali model follow..  13  94.....................................................................................................................................................................................................................................................................................................................KDFDEWLSKLEIYSGNKRIEPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLARYYLENEGKILIIVPTTALTTQMADDFVDLFSHAMIKKIGGGAKYKNDAPVVVGT---WQTVVKQPKEWFSQFGMMMNDECHLATGKS----ISSIISGLNNCMFKFGLSGSLRDGKANIMQYVGMFGEIFKPVTTSK----MEDGQVTELKINSIFLR-----------------------------------------------------------YPDEFTTKLKGKTYQEEIKIITGLSKRNKWIAKLAIKLAQKD--NAFVMFKHVSHGKAIFDLIKNEYVSGEVDTET--------------------------------------------RNIMKTLAENGKGIIIVASGVFSTGISVKLHHVVLAHGVK---------SKIIVLQTIGRVLRKHGSKTIATVWKSANTKKKYVHLNYLLKHGIDRIQRYADEKFNYVMKTVNLLE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 504
67 -18.8001s2m_A mol:protein length:400 Putative ATP-dependent RNA helicase DHH1  ali model follow..  16  27.........................................................................................................................................................................................................................................................................................................................YLKRELLMGIFEAGFE-SPIQEEAIPVAITGRDILARAKNGTGKT--AAFVIPTLEKNKIQALIMVPTRELALQTSQVVRTKHCGISCMVTTGGTNLRDDVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPL--TVKEFMVKHLHKPYEINLMEELTLKITQYYAF----------------------------------------------------------------------------------------------EERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYY----------------------------------------HARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVIN----FD-------TAETYLHRIGRSGRFG--HLGLAINLINWN--DRFNLYKIEQELGTEIAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 383
68 -18.7002j0u_A mol:protein length:374 ATP-DEPENDENT RNA HELICASE DDX48  ali model follow..  18  7.........................................................................................................................................................................................................................................................................................................................GLREDLLRGIYAYGFE-SAIQQRAIKQIIKGRDVIAQSQSGTGKT--ATFSVSVLQCRETQALILAPTRELAVQVQKGLLADYMNVQCHACIGGTNVGEDQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP--------------HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER------------------------------------------------------------------------------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSS----------------------------------------HGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIIN----YD-------NRELYIHRIGRSGRYG--RKGVAVNFVKND--DIRVLRDIEQYYSTQIDEMPMNVADLI............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 374
69 -18.7002eyq_A mol:protein length:1151 Transcription-repair coupling factor  ali model follow..  18  595................................................................................................................................................................................................................................................................................................................................LFCDSFPFETTPDQAQAINAVLSDMC-LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVEVAEGKIDI------LIGTHKLLQSDV-----KFKDLGLLIVDE-----EHRFGVRHKERIKAMRANVDILTLTATIPRTLNMA-----SGMRDLSIIATPARRLAVKTFVREYDSMVV---------------------------------------------------------------------------------------------REAILREILRGGQ---VYYLYNDENIQKAAERLAEL----------------------------VPEAR---------IAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPANTIIIERADHFG---------AQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDL-ELLGEEQSG--ELLENAVDALKAGREPSLEDLTSQQTEVEL-RMPSLLPDDFIPDVNTRLSFYKRIASAKTE................................................................................................................................................................................................................................................................................................................................................................................................................... 1039
70 -18.6005sup_A mol:protein length:390 ATP-dependent RNA helicase SUB2  ali model follow..  16  1..............................................................................................................................................................................................................................................................................................................GAMGSTGFKDFLLKPELSRAIIDCGFE-SEVQQHTIPQSIHGTDVLCQAKSGLGKT--AVFVLSTLQQGEVAVVVICNARELAYQEYLRFSKYMPDVKTAVFYGGTPISKDPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEEL-----QEIFRATPRDKQVMMFSATLSQ--EIRPICRRFLQNPLEIFVDDEAKLTLH----------------------GLQQYYIKLEEREKNRK--------------------------------------------------------------------LAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAIT----------------------------------------HGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAIN----YD-------EADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFP...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 378
71 -18.6003fmp_B mol:protein length:479 ATP-dependent RNA helicase DDX19B  ali model follow..  13  2.......................................................................................................................................................................................................................ATDSWALAVDEQEAAAESLSNLHLKEEKIKPDTNGAVVKTNANAEKTDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEE---RLKPQLLQGVYAMGFN-SKIQENALPLMLAEQNLIAQSQSGTGKT--AAFVLAMLSQKYPQCLCLSPTYELALQVIEQMGKFYPELKLAYAVRGNKLERGEQIVIGTPGTVLDWCSKLKFIPKKIKVFVLDEADVMIATQ-----IRIQRMLPRNCQMLLFSATFED--SVWKFAQKVVPDPNVIKLKREEET-IKQYYVL---------------------------------------------------------------------------------------------SSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQ---------------------------------------VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN----FD-DKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLD...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 467
72 -18.4003b6e_A mol:protein length:216 Interferon-induced helicase C domain-containing protein 1  ali model follow..  22  31......................................................................................................................................................................................................................................................................................................................................ELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKPGKVIVLVNKVLLVEQLFRKEFQPFLWYRVIGLSGDTQLKKSCDIIISTAQILENSLLNLEN-LSDFSLIIIDECHYLMQKLKNNRLKKENKPVIPLPQILGLTAS.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 216
73 -18.4002vso_A mol:protein length:395 ATP-DEPENDENT RNA HELICASE EIF4A  ali model follow..  17  28.........................................................................................................................................................................................................................................................................................................................ELDENLLRGVFGYGFE-SAIQQRAIMPIIEGHDVLAQAQSGTGKT--GTFSIAALQRKAPQALMLAPTRELALQIQKVVMAFHMDIKVHACIGGTSFVEDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPN--DVLEVTTKFMRNPVRILVKKDELT-IKQFYVN---------------------------------------------------------------------------------------------EEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSA----------------------------------------YSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVIN----YD-------NKENYIHRIGRGGRFG--RKGVAINFVTNE--DVGAMRELEKFYSTQIEE..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 385
74 -18.3002wzq_A mol:protein length:619 NS3 PROTEASE-HELICASE  ali model follow..  16  184....................................................................................................................................................................................................................................................................................................................................................FRKKRLTIMDLHPGAGKTKILPSIVREALKRRLRTLILAPTRVVA----AEMEEALRGLPIRYQTPAVK-TGREIVDLMCHATFTTRLLSSTR-VPNYNLIVMDEAHFTDPCSVAARGYISTRVEMGEAAAIFMTATPPGSTD--------FPQSNSPIEDIEREIP----------------------ERSWNTGFDWITDYQGK----------------------------------------------------------------------------------TVWFVPSIKAGNDIANCLRK-----------------------------------------SGKRV-----IQLSRKTFDTEYPK---DFVVTTDISEMGANFRAGRVILKPVILTDGPERIPVTPASAAQRRGRIGR---NPAQEDDQYVFSGDPLKNDEDHAHWTEAKMLLDNIYTPEGIIPTLFGPEREKTQAI-RKTFVELMRRGDLP............................................................................................................................................................................................................................................................................................................................................................................................................................................................... 544
75 -18.2005mz4_A mol:protein length:752 Genome polyprotein,Genome polyprotein  ali model follow..  13  260.............................................................................................................................................................................................................................................................................................................................................MVKKITTMNRGEFRQITLATGAGKTTELPRSVIEEIGRHKRVLVLIPLRAAAESVYQYMRQKHPSIAFNLRIGEMKEGDMATGITYASYFCQMSQPKLRAAMVEYSFIFLDEYHCATPEQLAIM---KIHRFSENLRVVAMTATPAG-----------------TVTTTGQKHPIEEFI--------------------------------------------------------------------------------------APEVMKGEDLGSEYLDIAGLKIPVEEMKNNMLVFVPTRNMAVEAAKKLKAKGYN---------------------------------------SGYYYSGE----PSNLRVVTSQS--YVVVATNAIESGVTLPDLDVVVDTEKRIRGLKRMAVTIGEQAQRRGRVGR----KPGRYYRSQETPVGSKDYHYDLLQAQRYGIEDGINITKSFREMNYDWSLYEEDSLMITQLEILNNLLISEELPMAVKNIMARTD................................................................................................................................................................................................................................................................................................................................................................................................................................................. 645

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.