| | | | | | . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 |
# |
Score |
Template |
Links and tools | %id | First |
GAMSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA | Last |
1 | -91.500 | 5ms0_F mol:protein length:183 Transcription termination/antitermination protein NusG |
ali model |
100 | 1 | GAMSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA |
183 |
2 | -74.000 | 2lq8_A mol:protein length:177 Transcription antitermination protein nusG |
ali model follow.. |
39 | 1 | ....GAMKKKWYIVLTMSGYEEKVKENIEKKVEATGIKNL-------VGRIVIPIRGGQRRKSEKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVS-SGGQPVPVKDREMRPILRLAGLEEKPVKVELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKI |
176 |
3 | -69.100 | 2oug_A mol:protein length:162 Transcriptional activator rfaH |
ali model follow.. |
16 | 2 | ........QSWYLLYCKRGQLQRAQEHLE---------RQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVR-FGASPAIVPSAVIHQLSVYKPKD---IVDPATPYPGDKVIITEGAFEGFQAIFTEPD-GEARSMLLLNLINKEIKHSVKNTEFRKL |
162 |
4 | -68.800 | 1m1g_A mol:protein length:248 Transcription antitermination protein nusG |
ali model follow.. |
38 | 3 | EQQVQELEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVM-VGGKPVPLKEEEVQNILNQIKRG--VKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI |
248 |
5 | -55.900 | 2xhc_A mol:protein length:352 TRANSCRIPTION ANTITERMINATION PROTEIN NUSG |
ali model follow.. |
39 | 1 | ......MKKKWYIVLTMSGYEEKVKENIEKKVEATGIKNLVGRIVIPEEVVLDATSPSERLILSKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSS-GGQPVPVKDREMRPILRLAGEKKKPVKVELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKI |
352 |
6 | -55.000 | 1nz8_A mol:protein length:119 TRANSCRIPTION ANTITERMINATION PROTEIN NUSG |
ali model follow.. |
37 | 1 | .......SIEWYAVHTLVGQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELRGGKKEVVRKKLFPGYLFIQMDLGDEAWEVVRGTPGITGFVG-AGMRPVPLSPDEVRHILEVSGLLG.............................................................. |
119 |
7 | -41.100 | 4zn1_A mol:protein length:147 Transcription elongation factor Spt5 |
ali model follow.. |
21 | 2 | ..........IFAVRTMVGQEKNIAGLMASRAEKEQLD--------------------YSILASESLKGYVLVEAETKGDVEELIKGMPRVRGIV------PGTIAIEEIEPLLT-------PKKIIENIEKGDVVEIIAGPFKGERAKVIRVDKHKEEVTLELENAAVPIPITLPVEGVKIV |
142 |
8 | -39.000 | 3qqc_D mol:protein length:163 Transcription antitermination protein nusG |
ali model follow.. |
19 | 2 | .......AGKIFAVRVTHGQEETTAKLIYSKVRTYNLP--------------------YAILAPSRVKGYIFVEAPNKGVVDEAIRGIRHARGVLPG------EVPFKEIEHFLE-------EKPAVSGLEPGDLVEVIAGPFKGQKAKVVKIDESKDEVVVQFIDAIVPIPVTIKGDYVRLI |
145 |
9 | -33.600 | 2kvq_G mol:protein length:63 Transcription antitermination protein nusG |
ali model follow.. |
95 | 1 | ........................................................................................................................GAMGRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA |
63 |
10 | -32.400 | 6duq_M mol:protein length:60 Transcription termination/antitermination protein NusG |
ali model follow.. |
95 | 1 | ...........................................................................................................................SNAKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA |
60 |
11 | -32.000 | 2mi6_A mol:protein length:62 Transcription termination/antitermination protein NusG |
ali model follow.. |
52 | 2 | ..........................................................................................................................RPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI |
62 |
12 | -31.400 | 1nz9_A mol:protein length:58 TRANSCRIPTION ANTITERMINATION PROTEIN NUSG |
ali model follow.. |
58 | 1 | .............................................................................................................................AQVAFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFGRETPVELDFSQVVKA |
58 |
13 | -27.900 | 2lcl_A mol:protein length:66 Transcriptional activator rfaH |
ali model follow.. |
15 | 1 | ....................................................................................................................GAMGPKDIVDPATPYPGDKVIITEGAFEGFQAIFTEPD-GEARSMLLLNLINKEIKHSVKNTEFRKL |
66 |
14 | -17.800 | 2e6z_A mol:protein length:59 Transcription elongation factor SPT5 |
ali model follow.. |
19 | 3 | ............................................................................................................................SGSSGFQPGDNVEVCEGELINLQGKILSVDGN--KITIMPKHEDLKDMLEFPAQELRK. |
58 |
15 | -17.100 | 5xon_W mol:protein length:612 Protein that forms a complex with Spt4p |
ali model follow.. |
15 | 15 | ..IPTVDDPGIWGVKVRLGKEKDVVRQILKKKLAREGTKNPLEI--------------YSAFQRDSFKGHVYIEARKAEAINDALKGNVNVF-----SNNSKFLVGIVEYKDLLRPVKSS------DVKLTRGSYVRVKNGKFKGDLAQVDEVLENGLEARLKL................... |
151 |
16 | -16.000 | 5oik_Z mol:protein length:1087 Transcription elongation factor SPT5 |
ali model follow.. |
14 | 171 | ..LPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQI--------------KSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLR----LGYWNQQMVPIKEMTDVLKVVKE-------VANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKM................... |
307 |
17 | -14.800 | 5xog_W mol:protein length:83 Spt4/5 complex component |
ali model follow.. |
14 | 20 | ...................................................................................................................................LNKTVKIRQGGYKGKIGIVKEANGDR----FRVELHNPNKTIPIPCSFLLIE |
67 |
18 | -14.000 | 2e70_A mol:protein length:71 Transcription elongation factor SPT5 |
ali model follow.. |
20 | 20 | ...................................................................................................................................IGQTVRISQGPYKGYIGVVKDATEST----ARVELHSTCQTISVDRQRLTTV |
67 |
19 | -13.500 | 4ytl_A mol:protein length:99 Transcription elongation factor SPT5 |
ali model follow.. |
26 | 1 | .................................................................................................................................FQPGDRIEVLNGEQRGSKGIVTRTTKDI----ATIKLNGFTTPLEFPISTLRKI |
50 |
20 | -13.000 | 3lpe_A mol:protein length:92 Putative transcription antitermination protein nusG |
ali model follow.. |
17 | 2 | SRRASVGAHMIFAVRTMVGQEKNIAGLMASRAEKEQLD--------------------YSILASESLKGYVLVEAETKGDVEELIKGMPRV------RGIVPGTIAIEEIEPLLT.................................................................... |
91 |
21 | -12.400 | 3h7h_B mol:protein length:106 Transcription elongation factor SPT5 |
ali model follow.. |
13 | 1 | ...GSHMDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQI--------------KSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGY----WNQQMVPIKEMTDVLK.................................................................... |
94 |
22 | -11.600 | 1s72_T mol:protein length:120 50S ribosomal protein L24P |
ali model follow.. |
35 | 43 | .................................................................................................................................VNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVLEKTDGEEVPRPLDTSNV... |
97 |
23 | -11.300 | 2do3_A mol:protein length:69 Transcription elongation factor SPT5 |
ali model follow.. |
18 | 18 | .................................................................................................................................FKMGDHVKVIAGRFEGDTGLIVRVEEN----FVILFSDLTMHELKVLPRDLQLC |
67 |
24 | -11.200 | 2exu_A mol:protein length:200 Transcription initiation protein SPT4/SPT5 |
ali model follow.. |
9 | 94 | KPRDGSGSATIWGVRCRPGKEKELIRKLLKKKFNLDRAMGKKKLKI------------LSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDI------YISQKLLIPVQELPLLLKPNLE................................................................ |
194 |
25 | -11.100 | 3ewg_A mol:protein length:91 Putative transcription antitermination protein nusG |
ali model follow.. |
19 | 3 | ...........FAVRTMVGQEKNIAGLMASRAEKEQLD--------------------YSILASESLKGYVLVEAETKGDVEELIKGMPRV------RGIVPGTIAIEEIEPLLTPKLE................................................................ |
85 |
26 | -10.500 | 2ckk_A mol:protein length:127 KIN17 |
ali model follow.. |
10 | 19 | ......................................................................IIVKIITKKLGEKYHKKKAIVKEVIDKDSGDKLKLDQTHLETVI----------------APGKRILVLNGGYRGNEGTLESINEKTFSATIVIE-LKGRRVEGIQYEDISKL |
126 |
27 | -10.200 | 5v7q_U mol:protein length:105 50S ribosomal protein L24 |
ali model follow.. |
23 | 3 | .................................................................................................................................VHKGDTVLVISGKDKGAKGKVLQAYPDRNRVLVEVNRIKKHTA........... |
46 |
28 | -10.100 | 4ytk_A mol:protein length:130 Transcription elongation factor SPT5 |
ali model follow.. |
17 | 1 | .................................................................................................................................LEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKI................... |
35 |
29 | -10.100 | 5o60_V mol:protein length:105 50S ribosomal protein L24 |
ali model follow.. |
20 | 3 | .................................................................................................................................VHKGDTVLVISGKDKGAKGKVLVAYPDRNKVLVEVNRIKKHTA........... |
46 |
30 | -9.830 | 1nkw_S mol:protein length:115 50S ribosomal protein L24 |
ali model follow.. |
24 | 16 | .................................................................................................................................FKKGDTVIVLSGKHKGQTGKVLLALPRDQKVVV..................... |
48 |
31 | -9.750 | 5xy3_Y mol:protein length:138 Ribosomal protein L24, putative |
ali model follow.. |
22 | 47 | ..............................................................................................................................RLPIRRDDEVMIFSGRMQNRTGKVTAVKLSEMRIYVD-KINGQAVSFPVHPSNV... |
104 |
32 | -9.750 | 4v4i_S mol:protein length:110 50S ribosomal protein L24 |
ali model follow.. |
31 | 2 | ............................................................................................................................RVKMHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIV..................... |
39 |
33 | -9.720 | 4wce_R mol:protein length:105 50S ribosomal protein L24 |
ali model follow.. |
27 | 3 | .................................................................................................................................IKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVV..................... |
35 |
34 | -9.710 | 3j3v_U mol:protein length:103 50S ribosomal protein L24 |
ali model follow.. |
24 | 3 | .................................................................................................................................VKKGDKVMVISGKDKGKQGTILAAFPKKDRVLV..................... |
35 |
35 | -9.670 | 5ohq_A mol:protein length:111 Transcription elongation factor SPT5 |
ali model follow.. |
16 | 20 | ......................................................................................QVVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPITP----TKNNKVKVILGEDREATGVLLSIDGED----GIVRMDLDEQLKILNLRFLGKL |
108 |
36 | -9.650 | 3j6b_Q mol:protein length:297 54S ribosomal protein L40, mitochondrial |
ali model follow.. |
24 | 63 | .................................................................................................................................FIPGDRVVVMSGASKGNIAVIKSFDKRTNSFIL..................... |
95 |
37 | -9.370 | 3jcs_W mol:protein length:143 ribosomal protein L24 |
ali model follow.. |
20 | 44 | ..............................................................................................................................AMPVRKDDEVIVKRGTFKGREGKVTACYRLKWVILID-KANGSTVAVGIHPSNV... |
101 |
38 | -9.360 | 2ww9_L mol:protein length:127 60S RIBOSOMAL PROTEIN L26-A |
ali model follow.. |
20 | 47 | ..............................................................................................................................ALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVD-KVNGASVPINLHPSKL... |
104 |
39 | -9.350 | 5t2a_X mol:protein length:143 uL24 |
ali model follow.. |
20 | 44 | ..............................................................................................................................AMPVRKDDEVIVKRGAFKGREGKVTACYRLKWVIHID-KANGSTVAVGIHPSNV... |
101 |
40 | -9.290 | 3j7z_U mol:protein length:104 50S ribosomal protein L24 |
ali model follow.. |
16 | 1 | .............................................................................................................................MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVE..................... |
37 |
41 | -9.240 | 5t5h_Z mol:protein length:113 60S ribosomal protein L26 |
ali model follow.. |
20 | 38 | ..............................................................................................................................AMPVRKDDEVRVKRGAYKGREGKVTACYRLRWVIHID-KANGTTVPVGVHPSNV... |
95 |