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Query: 6ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSASGLVPRGSVPTEVTLYDLPTRKEEWEKKYLHPEFLSHLQNFKDFDYTEICNDVYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDINLAFVVKYDMERQSELAPHHDSSTYTLNIALNEYGKEYTAGGCEFIRHKFIWQGQKVGYATIHAGKLLAYHRALPITSGKRYILVSFVNLast
1 -114.0006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model  100  1MGSSASGLVPRGSVPTEVTLYDLPTRKEEWEKKYLHPEFLSHLQNFKDFDYTEICNDVYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDINLAFVVKYDMERQSELAPHHDSSTYTLNIALNEYGKEYTAGGCEFIRHKFIWQGQKVGYATIHAGKLLAYHRALPITSGKRYILVSFVN 229
2 -54.7006fxk_A mol:protein length:718 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3  ali model follow..  34  488EFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEG--EGIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHED-SRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFPGYHTKRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVD 714
3 -46.5003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  8  1..........................................MGSDKIENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGA-----MATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVS-AALPLQFYPPLFNRYQG--GETFGYHIDNAIRSSATLFLSEPENYQGGELVIQDTYQQSIKLSAGSLVLYPSSS--LHQVTPVLSGERTAAFMWLQ 188
4 -38.0005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  11  17.........................................GFETSDRPGVCDGKYYEKIDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGEHEVIDKIQKKTREFLNSKKHCIDKYNFEDVQVARYKP--GQYYYHHYDPKDQRLATLMVYLKAPEEGGETDFPTLK-TKIKPKKGTSIFFKLYKETLHAGLPVKSGEKIIANQWIR 219
5 -36.5004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  15  1MTTFKQQTIKEKETKRKYNTTTLLDSGGGINKKSLLQNLLSKCKTTFQQSFTNANITLYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLN-SLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKN-CKVFVQPGDVLFFKGNEY-KHVVANITSGWRIGLVYFAH 297
6 -33.6005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  13  32...............................................QIISKFEEPLIVVLNVLSDEECDELIELSKSKLARSKVGSSRDV-----NDIRTSSGAFLDDNELTAKIEKRISSIM---------NVPASHGEGLHILNYEV--DQQYKAHYDAANNRISTLVMYLNDVEEGGETFFPKLN-LSVHPRKGMAVYFEYNELTLHGGAPVTKGEKWIATQWVR 212
7 -32.8002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  10  15...............................................EVVHLSWSPRAFLLNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKG---EDSVISKIEKRVAQVT-----MIPLENHEGLQVLHYHD--GQKYEPHYDHGGQRVVTMLMYLTTVEEGGETVLPNAEQLAVKPIKGDALMFSNDPASLHGSCPTLKGDKWSATKWIH 219
8 -26.5005iqs_A mol:protein length:315 WelO5  ali model follow..  9  1MKSDYDIPTTENLYFQGSMSNNTVSTKPALHLDINATEVKKYPTAIQDIIINRSFDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEFGTKVAQIYGHAIVGQSPDLKDYEEQVESIFHSLSGLPVEIPTGPEGQTYTPATIRLLEGREIAVHVGNDFLDQLSYFIPLTVPEAGGELVVNQSQSVAYAPGPGDMLLFNGGRY-YHRVSEVIGNPRRTIGGFL. 295
9 -26.4002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  8  9.......................................LPALKLALEYIVPCMNKHCVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYP--GNGTGYVRHVDNGDGRCVTCIYYLNKDWDSGGILRGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYA-TRYAITVWY. 211
10 -26.3004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  8  39.........................................................SQQAHFLPADLVRALAAECRRRDAEGNPAGVGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYP--PGAFYRRHLDDDDRRMVSAVLYLNEGWQGGQLRMFLADGHDVEPVAGCLVVFLSGEV-PHEVLPAGR-ERLSLTGWFR 216
11 -26.1006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  8  1........MGSSSSGLVPRGSHMDERRPKIGCDKTGLALEKTWQLQKNERLSNMVVNCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMIRTKCMVACYPGSGLGYIRHIDNRDGRCVTVLYYLNPNWNCGGQLWLYPNNVKIDPIFDRLLLFWSDRRNPHEVKPAYA-MRYAITLWY. 237
12 -26.0004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  8  7.......................................LPALKLALEYIVPCMNKHCVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYP--GNGTGYVRHVDNGDGRCVTCIYYLNKDWDSGGILRIFPEGADIEPKFDRLLFFWSDRRNPHEVQPAYA-TRYAITVWY. 209
13 -25.8003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  10  2..........................QHTYPAQLMRFGTAARAEHMTIAAAIHALDAAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATSVTLGQLQREQGDKLVSKAAEYFGIACRVNDGLRTTRFVRLFSDALDAKPLTIGHDYEVEFAPHCDDVSYRQLGGFLTIQGADNDAGMVMWDNRKIMLKPQPGQLTLFQSKN--LHAIERC-TSTRRTMGLFL. 262
14 -25.7002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  8  3.......................................LPALKLALEYIVPCMNKHCVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYP--GNGTGYVRHVDNGDGRCVTCIYYLNKDWDSGGILRIFPEGADIEPKFDRLLFFWSDRRNPHEVQPAYA-TRYAITVWY. 205
15 -25.4005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  8  14.......................................LPALKLALEYIVPAMNKHCVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTKAMVACYP--GNGTGYVRHVDNGDGRCVTCIYYLNKDWDSGGILRIFPEGADIEPKFDRLLFFWSDRRNPHEVQPAYA-TRYAITVWY. 216
16 -25.4002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  8  14.......................................LPALKLALEYIVPCMNKHCVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYP--GNGTGYVRHVDNGDGRCVTCIYYLNKDWDSGGILRGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYA-TRYAITVWY. 216
17 -25.1005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  9  14.......................................LPALKLALEYIVPCMNKHCVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRTKAMVACYP--GNGTGYVRHVDNGDGRCVTCIYYLNKDWDSGGILRIFPEGADIEPKFDRLLFFWSDRRNPHEVQPAYA-TRYAITVWY. 216
18 -25.1003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  10  1MKRKTAEVKGEKERNSKQISLEEDKIKGMFNPKIWDKTFQDGLKKEIED--SQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMINTYTK--GCHLLTHDDSRRISFILYLPDPDRKWKGGGLRLFPSILAKLVPQFNQIAFFKLPGFSFHDVEEVKVDKRLSIQGWYH 246
19 -25.0005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  9  3..............................SEEALPSAPERLALDYIVPCMRYYGICVV--SFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTKAMVACYP--GNGLGYVRHVDNGDGRCITCIYYLNQNWDHGGLLQIFPEGANIEPLFDRLLIFWSDRRNPHEVKPAYA-TRYAITVWYF 212
20 -23.0004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  11  1MSS--GVDLGTENLYFQSMLEE--KIKGMFNPKIWDKTFQDGLKKEIED--SQPYNWGTIHELVNDDLLRAVRKEIETEIHFETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKDMSINTYTK--GCHLLTHDDSRRISFILYLPDPDRKWKGGGLRLFPSILAKLVPQFNQIAFFKLPGFSFHDVEEVKVDKRLSIQGWYH 243
21 -22.9003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  11  1...................MLEEDKIKGMFNPKIWDKTFQDGLKKEIED--SQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDW-RLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKDMSINTYTK--GCHLLTHDDSRRISFILYLPDPDRKWKGGGLRLFPSILAKLVPQFNQIAFFKLPGFSFHDVEEVKVDKRLSIQGWYH 227
22 -20.1004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  8  12.GSHMNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTMDPFLHCVIPNFIQSQDFLEGLQK-------ELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTID-MSCAKYEFT--DALLCHDDELEGRRIAFILYLVPPWDGGTLDLYSIDEKSLIPSWNKLVFFEVSPVSFHQVSEVLSESRLSISGWFH 252
23 -17.9003nnf_A mol:protein length:344 CurA  ali model follow..  12  1MSSGVDLGTENLYFQSNAMNREQVEQLK---QEYEEKGY------------------CQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDL--VKYDFVSSFIQEKLALLNYITGKNLMIMHNALF---SVEPNHKGLPWHVGDFGASIWIPLDKITKEHRGGMQYVSKDGYEEDEYNLGDAFFFNKYV--LHQSVPLKPGLRRAFVILVD 268
24 -17.3003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  14  4........................................................SLFVTRLYPAIDAEEMESSCYAIEDDEAGQGWCEENGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGRALELEDLWINILPEGGSHASHIHPHSVISGTTYVSMPGG--TSALKLEDRQFIYVTPAVGDVLLWESWL--RHEVPMNMSEDDRISVSF.. 199
25 -17.1004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  7  13....................................QRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADKYPPHFKYVPNVATTCPTFRNTV--LINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAQ-PFHRDDAPVSLSVIFPLTEFTEENGATEVERDQAVLATMDPGDVLIVRQRV--VHAGGGNRTTARRVVLAYF. 228
26 -16.9004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  11  18....................................KRFSIQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLADFIPDHVARVHNLVDFILNHELLHKICRLTFEESGDYWLGYGAVIENGPGTTEQKWHRDQPEGMLNFFTALTDFDAETGKTQYADHPIEYVGLKPGDTTIVSGKI--THRGSDRSDKMRRAMPIILT 247
27 -16.4004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  12  3..............................TATLDRAAAIERFRRD-----------ANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLAQLAAAFVDGPVVPTAYALVLK--EPYRAAEVPWHRDRTVCNLSICLDDAGPH--NGCLEAATGPVVPVPVSQGDVVVHDVRL--VHGSGPANGSWRRTIVI... 212
28 -16.3002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  13  8........................................................SLFATRLYHAPL-AEFAASCYSIEDDDAGQEWCEREGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEG--TSALKLEDRTFRSVAPKVGDVLLWESWL--RHEVPMNMAEEDRISVSF.. 203
29 -16.0005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  10  19....................................RRVNASQGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNLFAHEVLEKVFKKDSGDYWLNMGNILNMLPGAEAQRPHRDDYDLMINITFPLNEFRHDNGGTLLNAEDLPAAEMQVGDALIFTGKC--VHGGGARSDKPRIGLALYLT 244
30 -15.8005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  9  13....................................RRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQLSSLPLFSKLFRDELMND---ELLHGLCKRLFGPESGDYWLTTSSVLETEPGYHGQELHREHDESMLNFLTALTDFTAENGATRVKADTAIPAVMNPGDAVLFTGKTLHGAGKNNTTDFLRRGFPLQFT 235
31 -15.5004xab_A mol:protein length:252 EvdO2  ali model follow..  11  2.....................................DAMEVVGTIDHRDREEFRSRAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKLLDSPHFARCRSIASAFLDMAEEELEFYGHAILKPPRYGAPTPWHQDRRGLSIWTTLDEATVE--SGCLHYDPTSAVACPLAPGGAVVHDFRT--PHYAGPLTDQPRRAYVL... 231
32 -15.4005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  10  13....................................PRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLSTTTRLVNVLAPISKAYREDVLNSKVLHRICSDAFHVYGDYWVLMGAVMELAPSNPAQPLHRDMRFSATSINFLVALSPFENGATHVSMDATVRALMNPGDALLITDSTIHCGGAETTGTETRRLLTIQLT 237
33 -15.2005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  11  7................QETEPGVPADLPAESDPAALERLAARYRRD-----------VHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTVMDYVADLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENK-------EKDASVPTAPHHDGTALTAWVALVDVPVE--RGCMTFIWMPRVTVPLRAGDCTFHHART--VHSAGASTDEPRLSTSA... 234
34 -15.2005ybm_A mol:protein length:314 PrhA  ali model follow..  10  1........MGSSSSGLVPRGSHMPPRLQRFPATASADEIFAAFQED-----------VVIEGFISPEQVARFSQEVDPAMEKIPVEVTNNGNSNDRTKRFIASPTFRNEIIESDLMHELCDRVFSKPGEG------MGYHFNDNMVIEVQPGAPAQRLHRDQEVINFFCAVTPFTEE--NGATRLGKIETVPAIMQPGDCYLMSGKVIHGAGHNATTTDRRRALALAI. 243
35 -15.0003emr_A mol:protein length:310 EctD  ali model follow..  12  1MEDLYPSRQNNQPKILKRKDPVIYTDRSKDNQAPITKEQLDSYEKN-----------LQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPESNDIRSDDNYFQDVANDKRILDIVRHLLGS----------DVYVHQSRINYKPGFKGKEFDWHSDMRAISVSIALSDNYSF--NGPLMLIGGGISVPTGKAGSVTLFESNT--MHGSTSITPYPRNNLFM... 264
36 -15.0004xbz_A mol:protein length:334 EvdO1  ali model follow..  12  29.........................AECDIRRTGLLPEHVTAFRRQ-----------LVVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPPIAMLAGHPLLLRIMEQLVGP----------NLIPTWDSMVFKTPAGAPRLAWHRDAGLYRVIDAGIYLDPAPEDNCVWCDTTGAVPAVMQPGDLLLHNILT--LHGAPAVVGKQRRVIYF... 253
37 -14.9005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  10  1........MGSSSSGLVPRGSHMPSRLQKFPATAPADEIYAAFKED-----------VIIEGFVPPDQMARFSQEIQPAMEKIQVQVTNDGNSNDRVKRFTTSPTFRHEILENDLMHELLQRVFSKPGEGM----------NDTMVIEVQPGAPAQRLHRDQEECLVNFFCAVTPFTVENGATRLGKIDSVPAIMQPGDCYMMSGKVIHGAGHNATLSDQRRALAFST. 243
38 -14.8003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  11  1...................................GPHMLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVS----GLPAIFRNDPLKRLLLEHGDVVVWGGESRLYHGIHPLTIDCRYNLT.... 211
39 -14.8002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  8  1............SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEEN-----------LVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYADKELFRYCTLPEILKYVECFTGPNIM----------AMHTMLINKPPDSGKKTSRHPLHQDLHVCAWTAMEHISRNNGCLVVENKARVHLVMEKGDTVFFHPLL--IHGSGQKTQGFRKAISC... 250
40 -14.5004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  11  6...........................................EERRDAEARRVKSGIKQASIFTLEECARIEAKIDEVVAKADKGLYREHTLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTH-----GVIPEGFVNSAVINDYQPGGC--IVSHVDPHIFERPIVSVSFFSD----ALCFGCKPVLHLPVRRGSVTVLSGYAADTHCIRP-IKERRAVII.... 212
41 -14.5004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  12  8........................GTENLYFQSMPERSDYEEQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNGPGQERLYPPGDVDEIPEWVHQLVIQKLVEH-RVIPEGFVNSAVINDYQPGGC--IVSHVDPHIFERPIVSVSFFSD----ALCFGCKPVLSLPVRRGSVTVLSGYAADTHCIRP-IKERRAVII.... 233
42 -14.4004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  13  3...........................................QLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNGPGQERLYPPGDVDEIPEWVHQLVIQKLVEH-RVIPEGFVNSAVINDYQPGGC--IVSHVDPHIFERPIVSVSFFSD----ALCFGCKPVLSLPVRRGSVTVLSGYAADTHCIRP-IKERRAVII.... 209
43 -14.3005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  10  2..............................GRMQLTADQVEKYKSD-----------VLLEGAFSPEEVHVMRQALKKDQEVQGPILEEDGRTVRALYASHTRQSVFDQLSRSDRLLGPATQLLEC----------DLYIHQFKINTKRAFGGDSWAWHQDPRAVNVGVFLSDVTEF--NGPVVFEKHPMVSPKAASGSVMLFHPEI--IHGSAPISPFARDLLII... 229
44 -14.2002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  10  1......GSHMTNVTGDYTDCTPLLGDRAALDSFYEEHGY------------------LFLRNVLDRDLVKTVAEQMREGLVALGAADPHATLEELTIDSFEHDYVKYDAFWNNPSTIKVFEQVFGE--PVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDQDFRTFWIPLIRTTRE--SGGVALEDEHLLHSPMEPGDILLFHAHM--CHKSIPLSKDPRLMRMSM.. 246
45 -14.1004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  11  2.....................................HMVPALTREQLYIFDTTG--LVIPGVFGSGEVESFRSELERLDT-----VDPGFPRTRRYPDLPAASPVFARLALDDRLLAPVRDVVNQPLRLLEGYGLRRTKDSVLYLHGGNSELGDRQVGRDLSIVKALVYLSDIQSPEDGSFCYVQGSHKSDVFVRSGDVLLLNEALM--HGTRRLTEGDRLLTA.... 224
46 -14.0004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  10  3..........................................VRGSGPSVLSRLQDAAVVRPFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEASMAIMRRVQAAAFGPGQTLLSSV------------HVLDLEARGY--IKPHVDSKFCGATIAGLSLLSP-----MRLVHTQELELLLEPGSLYILRGSARYSHEERRIPRGRRISVI.... 186
47 -13.9002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  14  6..............................KKFALTAEQRASFEKN-----------IGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDLDAISGGTNIANYDRHLDDDFLASHICR---PEICDRVESILGPNVLCWRTEFF---PKYPGDEGTDWHQAGGTITVWTAFTDANIA--NGCLQFDEASAVPMQMKAGQFIIFWSTL--MHASYP-SQEMRMGFAS... 256
48 -13.6003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  13  67..........EESKRAYVTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGIKHKPDQMTINQYEPGQG--IPAHIDTSAFEDEIVSLSLGSE-----MDFKHPDGIAVP-PRRSLLVMTGESRYTHGITCSKRGLRTSFT.... 308
49 -13.6004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  10  1..........SEMQDLYPSRQRADAEMRPRLDPVVHSEWTNDAPISARQAAAFDRDGIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIVTEPQSNEIRSQSPVMARLAADARLADVARFLLGD----------EVYIHQSRLNYKPGFKGREFYWHSDMRALSMSVLLAENTPH--NGPLMVHRHGIVAPTGKPGTVILFDCNL--MHGSNGITPFPRANAFL... 263
50 -13.5003gja_A mol:protein length:319 CytC3  ali model follow..  11  1.......................MTTVSEQANFTFSPEEVARFERD-----------IGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGKANISNYDRHLDHIMRPEIVDRVGSLIGRNLLCWRSEFF---------------PKYQGDEGTDWHQAATTITVWTAFTHSTEQ--NGCLQLDESQAYPMVLKPGEAVIFWSNT--MHASLPHTGSKRMGFAA... 258
51 -13.4005epa_A mol:protein length:279 SnoK  ali model follow..  11  8........................DPGGPTTAENLSKEAVRFYREQ-----------VHIPRVLSETEVTAFRAACEEVLEKEGREIWGAGEDEVQVHYVAQKHPELRSLVLHPEISGIALRLAGAPLR----------VYSSDILVKEPKRTLPTLVHDDSATLTAWIALTDVPVE--RGCMSYPWQPRVAVPVRAGDVVFHHCRT--VHMAEATSDSVRMAHGV... 231
52 -13.3002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  12  5...............SPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQE-DYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSKVQTLARSLGL--QMPVVVQSMYIFKQPHFGGEVSPHQDASGRVLGVWIAVEDATLENGCLWFDNSLFVPTPVQRGALVLIHGEV--VHKSKQLSDRSRQAYTF... 262
53 -13.1003pl0_A mol:protein length:254 Uncharacterized protein  ali model follow..  12  166..............................................................................................................................................................HRDGVDFVAVVFIGRQG--VRGGETRVFDAAGPQGVEQPWTVLLLDDQQVI-HESTPLLPAHRDTLVLTYR 246
54 -13.1002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  11  10.........................................................VILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVS----GLPAIFRNDPLKRLLLEHGDVVVWGGESRLYHGIHPLTIDCRYNLT.... 198
55 -13.0004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  11  9.........................................................VILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDKIHPDLRAPIVSVS----GLPAIFRNDPLKRLLLEHGDVVVWGGESRLYHGIHPLTIDCRYNLT.... 197
56 -12.0006EC3 Entity 1(prereleased)  ali follow..  14  262.........................................................VNAGPVFADDTIARLKAGAIDLISRFTEHVENEAPVLYRIHNLEKQDWAERELLFRPELAELAAAFVGS----------PVVPTAFALVLKEPKRAAGVPWHRDRANVACNLSICLDTAGPENGCLEGDGGPRVPVPSKVGDVIVHDVRL--VHGSGPPSDQWRRTIVI... 451
57 -11.5002q30_A mol:protein length:110 Uncharacterized protein  ali model follow..  15  1..............................................................................................................GMEAHMKSHNLLEAVRFDDQRFVMELVHESENFKIVSFTFKAGQELPVHSHNIEGELNIVVLE-------GEGEFVGDGDAVIPAPRGAVLVAPIST--PHGVRAVTDMKVLVTIA... 107
58 -11.0002zew_A mol:protein length:147 S-layer associated multidomain endoglucanase  ali model follow..  16  10..............................................................................................................................................................................NPGFEDGLDSWQDWQQDMSAAHNGALKIGGGKAAGGGQDIPLKPNTTYILGAWAK 70
59 -10.7005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  12  2..............................................EAAPLQYLRPGMVLLKFLKHDDQVDIIRRCQKLGIGSGGFYTPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASQKARPANDVEELPPLSPDICLVNFYTSSGK--LGLHQDKDETKPSLHKGLPVVSFSGDTAEFDVDKASKVDLESGDVLIFGGKSRLIHGVSRIKRPGRLNLT.... 227
60 -10.3005j4g_A mol:protein length:107 Uncharacterized protein  ali model follow..  10  24............................................................................................................................................SSHKEIRICMPKGAVMDKHKAPGAISVQVL---------EGKIVF-EVGDEKIEMPKGALISLEAQV--LHRLDALENSVIRLSLS... 97
61 -10.3005cu1_A mol:protein length:212 DMSP lyase  ali model follow..  13  103................................................................................................................................YCLIGEGGPFASDSLAAYVVYMPAGLYYPFHQHPAEEIYFIL---------AGEAEFLMEGHPPRRLGPGDHVFHPSGH--PHA---TRTYDRPFMALVL. 188
62 -10.2001yhf_A mol:protein length:115 hypothetical protein SPy1581  ali model follow..  10  38............................................................................................................................................QDLGITVFSLDKGQEIGRHSSPGDAMVTIL---------SGLAEI-TIDQETYRVAEGQTIVMPAGI--PHALYAVEAFQMLLVVV... 111
63 -10.2005j4f_A mol:protein length:119 Uncharacterized protein  ali model follow..  10  38............................................................................................................................................SSHKEIRICMPKGAVMDKHKAPGAISVQVL----------GKIVF-EVGDEKIEMPKGALISLEAQV--LHRLDALENSVIRLSLS... 111
64 -10.1002o8q_A mol:protein length:134 Hypothetical protein  ali model follow..  16  43..............................................................................................................................................AHVIRAIPGKEAKPTWHTHTVGFQLFYVLR--------GWVEFEYEDIGAVMLEAGGSAFQPPGV--RHRELRHSDDLEVLEIV... 116
65 -10.0004b29_A mol:protein length:217 DIMETHYLSULFONIOPROPIONATE LYASE  ali model follow..  9  18................................................................GRAALTHLLEAARDWHEALPEFREDLRWADRPAHALPVIDHLTRDPGHASDQSQPLRDALVAAAPELAGPSGHFLTQSLRVTVGYWGPGLDYGWHEHLPEELYSVV---------SGRALFHLRNAPDLMLEPGQTRFHPANAP--HA---MTTLTDPILTLVL. 197
66 -10.0002iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  10  1......................MGSSSSGLVPRGSHMRVIDREGVYEISLSPTGVSRVLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTFNSLLCNLYRNEKD-SVDWHSDDESLGRCPIIASLS----GATRTFTYVERVKIPLDHGTLLIMEGATQAQHRVPKEYHEPRVNLT.... 219
67 -10.0003fjs_A mol:protein length:114 uncharacterized protein with RmlC-like cupin fold  ali model follow..  13  34............................................................................................................................................HRLEVMRMVLPAGKQVGSHSVAGPSTIQCL---------EGEVEI-GVDGAQRRLHQGDLLYLGAGA--AHDVNAITNTSLLVTV.... 106
68 -9.9601e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  10  1MRSHILGKIELDQTRLAPDLAYLAAVPTVEEEY-----------------------------------------DEFSNGFWKHVPLWNASGDSEDRLYRDLKDAAAQPTAHVEHV-PYLKEIVTTVFD----------GTHLQMARSRNLKNAIVIPHRDDRYFRTFMVLEDSPL-------AFHSNEDTVIHMRPGEIWFLDAA--TVHSAVNFSEISRQSLCV... 173
69 -9.9202zez_A mol:protein length:144 S-layer associated multidomain endoglucanase  ali model follow..  12  7..............................................................................................................................................................................NGTAENGMDGWPDWGYPVSAAYGGTFKLSGGKQAGMGQKVALKPNTTYILGAWGK 67
70 -9.6903rns_A mol:protein length:227 Cupin 2 conserved barrel domain protein  ali model follow..  7  23.EAEVVSMRILNQPNSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIENNKKTISNGDFLTANHNYSIEARDNLKLIEIGEKIGDGNMENKTLKMLESASAFNLAEVVEYQEGKIVSKNLVA--------------PNLVMTIMSFWKGESLDPHKAPGDALVTVL---------DGEGKY-YVDGKPFIVKKGESAVLPANI--PHAVEAETENFKMLLIL... 224
71 -9.6704bif_A mol:protein length:156 CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN  ali model follow..  16  58................................................................................................................................................GASVTFEPGARTAWHTHPLGQTLIVT---------AGCGWAQREGGAVEEIHPGDVVWFSPGEKHWHGAAPIQERLDGKAVDWME 141
72 -9.5002f4p_A mol:protein length:147 hypothetical protein TM1010  ali model follow..  13  44................................................................................................................................................VYDVVFEPGARTHWHSHPGGQILIVT---------RGKGFYQERGKPARILKKGDVVEIPPNVVHWHGAAPISTQVHLGPAEWLG 127
73 -9.3904p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  12  2...........................ASWSHPQFEKGATTRILGVVQLDQRRLTDDL---VLAKSNFSSEYSDFACGRWEFCMLRNQSGKQEEQRVVVHETPALATPLGQSLPYLNELLDNH-----------FDRDSIRYARIIRISE--NACIIPHRDGKFIRVHLVLDTNEK-------CSNTEENNIFHMGRGEIWFLDAS--LPHSAGCFSPTPRLHLVV... 181
74 -9.3604uxa_A mol:protein length:131 CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN  ali model follow..  16  39................................................................................................................................................GHSTTFEPGARTAWHTHPLGQTLIVT---------AGCGWAQREGGAVEEIHPGDVVWFSPGEKHWHGAAPIHERLDGKAVDWME 122
75 -9.3205fq0_A mol:protein length:114 KDGF  ali model follow..  14  30............................................................................................................................................PDLMAVCVKFDRGAVGTPHQHERHDQIGYVVQ--------GAFEV-ELEGEKRRLSPGDAFVAPHHT--MHGAVALEPDSLVIDL.... 103
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.