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current user: public |
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Query: 6cfw_C mol:protein length:124 Monovalent cation/H+ antiporter subunit G, from PDB1018 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 | |||||||
# | Score | Template | Links and tools | %id | First | MIAYYLIIAFLGISVTFNMLGSIALHRFPDVYTRLHGATKCTTFGTIFAALAVITHAIVKLQATGNPKYLQMAIHSFVAMLALLLTNPVGAHAIAKAAHKTGYLPKRAVVDAYLEKERGEKNES | Last |
1 | -77.200 | 6cfw_C mol:protein length:124 Monovalent cation/H+ antiporter subunit G | ali model | 100 | 1 | MIAYYLIIAFLGISVTFNMLGSIALHRFPDVYTRLHGATKCTTFGTIFAALAVITHAIVKLQATGNPKYLQMAIHSFVAMLALLLTNPVGAHAIAKAAHKTGYLPKRAVVDAYLEKERGEKNES | 124 |
2 | -9.460 | 2lor_A mol:protein length:108 Transmembrane protein 141 | ali model follow.. | 10 | 1 | ...................MVNLGLSRVDDAVAAKHPGSHAFMKGVFTFVTGTGMAFGLQ-----MFIQRKFPYPLQWSLLVAVVAGSVVSYGVTRVESEKCNNLWLFLETGQLPKDRSTDQRS | 108 |
3 | -8.540 | 3bb6_A mol:protein length:127 Uncharacterized protein yeaR | ali model follow.. | 10 | 21 | ..........................TAPAGIFERHLDTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQ-----VILIEAGQFAVFPPEKWHNIEAMT.......................... | 89 |
4 | -8.090 | 3dl3_A mol:protein length:119 Tellurite resistance protein B | ali model follow.. | 18 | 23 | ..........................NVPEALLTHHN-TAVDVFGQICVMEGVVTYYGFANSEATEPEI-----KVVINAGQFATSPPQYWHRIELSD.......................... | 88 |
5 | -7.290 | 6g1k_A mol:protein length:921 Transient receptor potential cation channel subfamily c member 4a | ali model follow.. | 8 | 436 | .LMDFVMNSLYLATAVFAIANIFSSLRL------ISLFTANSHLGPLQISLGRMLL----------------ILKFLFIYCLVLLAFANGLNQL.............................. | 537 |
6 | -6.810 | 5z96_A mol:protein length:755 Short transient receptor potential channel 4 | ali model follow.. | 14 | 474 | .........TLVAEALFAIANIFSSLRL------ISLFTANSHLGPLQISLGRMLL----------------ILKFLFIYCLVLLAFANGLNQL.............................. | 537 |
7 | -6.770 | 4c5f_A mol:protein length:341 MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE C | ali model follow.. | 8 | 192 | .....................ILAIMQTESSFN--YAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLLAMLNNVYLGGIDNPTSRRYAVITAYNGG...................... | 284 |
8 | -6.740 | 4j05_A mol:protein length:530 Phosphate transporter | ali model follow.. | 17 | 78 | .....LMKAAANIGC---VVGQVMFGVLGDSFGR----KFVYGKELILIIVATIFQMSAPSHWDGNRVLTWITICRVFLGIGIGGDYPMSATVVSDRA.......................... | 163 |
9 | -6.630 | 4r0j_A mol:protein length:253 Uncharacterized protein | ali model follow.. | 10 | 11 | ..............FYARIRGDRALFTNPATKGGSERSSRQALQGIIDGIYHKVVNQIQTELHGVRALLHDYSADLSYVSYLSDVEYLVKFHFIWNENREDLIQDRLPKKHEAIMERSIRKG.. | 134 |
10 | -6.580 | 1ogh_A mol:protein length:204 BIFUNCTIONAL DEAMINASE/DIPHOSPHATASE | ali model follow.. | 10 | 88 | .........VDYVVEGGVLGTTNEYIELPDISAQYQGRSSLGRVFLTSHQTAGWIDAGFKGKITLEIVAFDKPVILIGQLIFSKLLSPADV................................. | 175 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |