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Query: 6djt_A mol:protein length:331 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMIPEEIYKILRKQRYQIDGHTAVKLCGWVRKKMLEDKNCYKSKFYGIETHRCIQCTPSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAISLSGEPTLYPYLDELIKIFHKNGFTTFVVSNGILTDVIEKIEPTQLYISLDAYDLDSYRRICGGKKEYWESILNTLDILKEKKRTCIRTTLIRGYNDDILKFVELYERADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILKLAKMLDENSSYKLIDDSEDSRVALLQNENRKINPKLLast
1 -95.6006djt_A mol:protein length:331 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase  ali model  100  1MGSSSSGLVPRGSHMIPEEIYKILRKQRYQIDGHTAVKLCGWVRKKMLEDKNCYKSKFYGIETHRCIQCTPSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAISLSGEPTLYPYLDELIKIFHKNGFTTFVVSNGILTDVIEKIEPTQLYISLDAYDLDSYRRICGGKKEYWESILNTLDILKEKKRTCIRTTLIRGYNDDILKFVELYERADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILKLAKMLDENSSYKLIDDSEDSRVALLQNENRKINPKL 325
2 -68.6002yx0_A mol:protein length:342 radical sam enzyme  ali model follow..  37  5ITIKPGKITVQANPNMPKEVAELFRKQHYEIVGHSGVKLCHWLKKSLTEGRFCYKQKFYGIHSHRCLQMTPVLAWCTHNCIFCWRPMENFLGTE----LPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKF-EEAWNPTHAAISLSGEPMLYPYMGDLVEEFHKRGFTTFIVTNGTIPERLEEMLPTQLYVSITAPDIETYNSVNIPIPDGWERILRFLELMRDLPTTVVRLTLVKGENHSPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLGYHIEDEYEPSRVVLIMRDDVDPQGT. 333
3 -38.6005v1q_A mol:protein length:459 Radical SAM  ali model follow..  14  57.NHGIEIATSFFKKEIEMGKLERALSLNIYSDNNIEDSLNNPYETLQNARKHVAKLKKHNILSFPLELVIYPSMYCDLKCGFCFLANR-------EDRNAKPAKDWERILRQAKDNGVLS-------------------------VSILGGEPTRYFDIDNLLIACEELKIKTTITTNAQLIKKLAKSKYITPVLSLQTLDSKLNFELMG---VRPDRQIKLAKYFNEVGKKCRINAVYTKQSEQIIELVDFCIENKIDRFSVANYSEVTGYTKIKKKYDLADLRRLNEYVTDYITQREANL....................... 328
4 -38.5006c8v_A mol:protein length:394 Coenzyme PQQ synthesis protein E  ali model follow..  13  21................................................................PVGLLAELTHRCPLRCPYCSNPLELDRRSA-----ELDTQTWLRVLTEAAGLGVLH-------------------------VHLSGGEPTARPDIVEITAKCAELGLYSNLITSGVGGDALYDVGLDHVQLSVQGVDAANAEKIGG-LKNAQPQKMQFAARVTELGLPLTLNSVIHRGNHEVPGFIDLAVKLGAKRLEVAHTQYYGWAYVN-RAALMPDKSQVDESIRIVEAARE.......................... 229
5 -37.0006b4c_A mol:protein length:298 Viperin  ali model follow..  14  10................................................................PVSVNYHFSRKCNKECLFCFHTATTS--------HVEKPENAKRGLTLLKQAGMKKIN-------------------------FAGGEPFLYPKLGEMIDFCKETLESVSIVTNGSLVKEKHGRNIDILAVSCDSFNEATNIKIGRGSGDNVQKLYEIGSWCQKYDIKFKLNTVVNKFNEDMNDHLNALQPFRWKCFQVLIVTGENDSDKTLRNAHTISDDEFDRFCERHSSQTCLVPEPNRLMAKSYLI........... 237
6 -34.2005vsl_A mol:protein length:318 Radical S-adenosyl methionine domain-containing protein 2  ali model follow..  16  2.....................................KEQPQVRGELEETQETQEDGNSTQRTTPVSVNYHFTRQCNYKCGFCFHTA--------KTSFVLPLEEAKRGLLLLKQAGLEKIN-------------------------FSGGEPFLQDRLGKLVRFCKEELASVSIVSNGSLIREDYGEYLDILAISCDSFDEQVNALIGRGKKNHVENLQKLRRWCRDYKVAFKINSVINRFNEDMNEHIKALSPVRWKVFQCLLIEGENSGEDALRERFLISNEEFETFLERHKEVSCLVPESNQKMKDSYLILDEYMRF.... 267
7 -30.6005tgs_A mol:protein length:263 7-carboxy-7-deazaguanine synthase  ali model follow..  15  1MGSSSSGLVPRGSHM------------------AKGIPVLEIFGPTIQGEG----------MVIGQKTMFVRTAGCDYSCSWCDSAFTWDGSAKKDIRW---------------------------TAEEIFAELKDIGGDAFSHVTISGGNPALLKQLDAFIELLKENNIRAALETQGTVYQDWFTL-----DLTISPKPPSS------KMVTNFQKLDHILTSLQENDRQHVSLKVVIFNDEDLEFAKTVHKRYPGIPFYLQVGNDHTTDDQSLIAHLLGKYEALVDKVAVDAELNLVRVLPQ.................... 245
8 -27.9005wgg_A mol:protein length:453 Radical SAM domain protein  ali model follow..  14  29VDDISFDILDYYKNFTAGEIKNKLAHKYNADEIDEALREIESLEAE-SEDPYKEYVSSMDRKSVVKALCLHISHDCNLRCKYCFASTGNFGGQR----NMMSLEVGKKAIDFLISE---------------------SGNRKNLEIDFFGGEPMMNFDVKGIIEYARQKNFRFTLTTNGLLLNDINENMQN-IVLSIDGRKENDRMRIRIDGSGCYDDILPKFKYVAESQDNYYVRGTFTRENMDFSNDVLHLADEGFRQISVEPVVAAKDSGYDLREEDLPRFEEYEKLAYEYVKR............................ 318
9 -27.8003c8f_A mol:protein length:245 Pyruvate formate-lyase 1-activating enzyme  ali model follow..  16  3.................................................IGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNR-------DTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVT-------------------ASGGEAILQAEVRDWFRACKKEGIHTCLDTNGFVRPVIDELLTDLVMLDLKQMNDEIHQNLVGVSN---HRTLEFAKYLANKNVKVIRYVVVPGWSDDDDSAHRLGEFTNVEKIELLPYHELGKHK-KLDGVKPPKKETMERVKGILEQY............................ 239
10 -27.1004k36_A mol:protein length:392 Anaerobic sulfatase-maturating enzyme  ali model follow..  15  5.................................................................SLLIKPASSGCNLKCTYCFYHSLSDNRNV-KSYGIMRDEVLESMVKRVLNEANGHCS-----------------------FAFQGGEPTLFEKLMELQRKHNYKNIYNSLQTNGTLIDKFLSENKFLVGLSMDGPKEHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVVTSNTRHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSL-KPKDYTKFLKNLFDF............................ 224
11 -26.9001tv7_A mol:protein length:340 Molybdenum cofactor biosynthesis protein A  ali model follow..  15  16...................................................................LRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELTFDEMARIAKVYAELGVKKIR-------------------------ITGGEPLMRRDLDVLIAKLNQID-DIGLTTNGLLLKKLYDAGLRRINVSLDAIDDTLFQSINNR-NIKATTILEQIDYATSIGLNVKVNVVIQKNDDQIIPMLEYFKDKHIE-IRFIEFMDVG-NDNGWDFSKVVTKDEMLTMIEQHFEIDQFGLITSVSQSFCSTCTRARLSSDGKF 275
12 -26.4004m7s_A mol:protein length:269 BtrN  ali model follow..  11  1............................................................MDKLFSMIEVEVNSQCNRTCWYCPNSVS-----KRKETGEMDPALYKTLMEQLSSLDFA-----------------------GRISFHFYGEPLLCKNLDLFVGMTTEYIARPIIYTNGDFLQTLTELGIQKFIVTQHAGAKHKFRGVYD................................................................................................................... 129
13 -26.4004m7t_A mol:protein length:270 BtrN  ali model follow..  11  1..............................................MGSSSSGLVPRGSHMDKLFSMIEVEVNSQCNRTCWYCPNSVS-----KRKETGEMDPALYKTLMEQLSSLDFA-----------------------GRISFHFYGEPLLCKNLDLFVGMTTEYIARPIIYTNGDFLQTLTELGIQKFIVTQHAGAKHKFRGVYD................................................................................................................... 143
14 -23.4004njg_A mol:protein length:230 7-carboxy-7-deazaguanine synthase  ali model follow..  16  1MGSSSSGLVPR-----GSHMTYAVKEIFYTLQGEGAN--------------------------AGRPAVFCRFAGCNLWSGREEDRAQDTDFVGTDGENGGKFKDADALVATIAG--------------------LWPAGEAHRFVVCTGGEPMLQLDQ-PLVDALHAAGFGIAIETNGSLP---VLESIDWICVSPKADAPLVVTKGNE----KVVIPQDNQRLADYAKLDFEYFLVQPMDGPSRDLNTKLAIDWCKRHPQWR............................................................. 212
15 -19.1003can_A mol:protein length:182 Pyruvate-formate lyase-activating enzyme  ali model follow..  19  7.................................................................................................................................................VTFCGGEPLLHPEFLDILKRCGQQGIHRAVDTTLLARKETVDEVMELLLIDLKSMDSTVHQTFCDVPN---ELILKNIRRVAEADFPYIRIPLIEGVNADEKNIKLSAEFLHPEIINLLPYHDIGKGKHAKGYKMQTPSEEVQQQCIQILTDYGLKAT...................... 179
16 -17.3004jy8_A mol:protein length:358 FEFE-HYDROGENASE MATURASE  ali model follow..  12  1MWSHPQFEKASTGREILEKLEREFTREVLSINDRGFNEALFKLADEIRRKYVGDEVHIRAI--------IEFSNVCRKNCLYCGLRRDNKNLKRYRMTPE-------EIVERARLA---------------------VQFGAKTIVLQSGEDPYYMPDISDIVKEIKKMGVAVTLSLPREYYEKWKEAGADRYLLRHETANPVLHRKLR--PDTSFENRLNCLLTLKELGYETGAGSMV-QTIDDLVDDLLFLKEHDFDMVGIGPFIPHDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATT..................... 279
17 -17.1005fep_A mol:protein length:358 [FeFe] hydrogenase maturase subunit HydE  ali model follow..  12  1MWSHPQFEKASTGREILEKLEREFTREVLSINDRGFNEALFKLADEIRRKYVGDEVHIRAI--------IEFSNVCRKNCLYCGLRRDNKNLKRYRMTPE-------EIVERARLA---------------------VQFGAKTIVLQSGEDPYXMPDISDIVKEIKKMGVAVTLSLPREYYEKWKEAGADRYLLRHETANPVLHRKLR--PDTSFENRLNCLLTLKELGYETGAGSMV-QTIDDLVDDLLFLKEHDFDMVGIGPFIPHDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATT..................... 279
18 -16.0004rtb_A mol:protein length:477 HydG protein  ali model follow..  13  24..QRTYEIVNKVNRNPKEEISQIIQKKGERLSLIEAGIAFANDTEELDQILFWQARKVKEEIYGKRIVLLYLSNICINNCSYCSFRRENKELSRVRLSLE-------EAVDEAKAI---------------------REMGHTRILLVMGEEPEDKSYLEEIIPAIYSEVDIRRINVNAPLYERLKKLKIGTYQLFQESYNPEVYREVHDGPKTNFLWRLNAVERAIEAGIDDIGIGALFGLGDPLFELLGVIAHAGPHTVSVPRLKPANSVFSNDYKISDHKFKKIVALLRIMLPYTGIILST..................... 320
19 -15.9003rf9_A mol:protein length:404 Ribosomal RNA large subunit methyltransferase N  ali model follow..  16  58..........DEMTDINKVLRGKLKEVEEQRSSDGTIKWAIAVGDQRVETVYI--------EDDRATLCVSSQVGCALECKFCSTAQQGFNRN-----------RVSEIIGQVWR-----------AAKIVGAAKVTGQRPITNVVMMGMGEPLLLNNVVPAMEIMLDFGFRVTLSTSGVVLDKLGDMIDVALAISLHAPNDEIRDEIVPINKKNIETFLAAVRRYANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--KINLIPWNPFPGAP------GRSSNSRIDRFSKVLMSY------------TTIVRKTRGDDIDGQL 358
20 -15.7003t7v_A mol:protein length:350 methylornithine synthase PylB  ali model follow..  10  2IQKMALDEFDSLGDKVGYQLTDNDLRTLLSLESKEGLERLYSAARKVRDHYFGNRVFLNCF--------IYFSTYCKNQCSFCYYNCRNEI--------NRYRLTMEEIKETCKTL---------------------KGAGFHMVDLTMGEDPYYYEDFVELVQIVKEELGLPIMISPGLMLLKAREKGANFLALYQETYDTELYRKLR--VGQSFDGRVNARRFAKQQGYCVEDGILT-NDIESTILSLRGMSTNDPDMVRVMTFLPQGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLEGIDGMVLRLNAGANIVTSIL 301
21 -14.8005exi_A mol:protein length:331 Lipoyl synthase  ali model follow..  14  1MGSSSSGLVPRGSHMSVAAEGRRLLRLEVRNAQTPIERKPPWIKTRARIGPEYTELKIFECWEDREATFLIGGDQCTRRCDFCQIDTGKPAELD--------RDEPRRVADSVRTMGLRYATVTGVARDDLPD----------------GGAWLYAATVRAIKELNPSTGVEL-LIPDFNGLAEVFESGPEVLAHNVET-VPRIFKRIR--PAFTYRRSLGVLTAARDAGLVTKSNLIL-ETSDEVRTALGDLRDAGCDIVTITQYLRP--SARHHPVERWVKPEEF-VQFARFAEGLGFAGVLAGPLVRSSYRAGRLYEQARNS 319
22 -14.2005l7j_A mol:protein length:459 ELP3 family  ali model follow..  11  2......................................................KKLSRTISGVTPVAVMTKPLPCPGKCIYCPTFAATPQSYTPES-------------PAVLRAKSCEYQAYKQVALRLRIIQDMGHPTDKVELIIMGGTFLSADYQYGFIKDCYDA-VGLCIETR-AEIQRMIDFGTTRVELGVQMLDDDIYKLVERGH--RVSDVAEATCLLREYGLKVHYHWMPGLPGSSPEKDLALSRMVCPDGLKLYPTMVVEGTI-KEGRYTPYPNGTMTGLIADIKALV........................... 269
23 -14.1004r33_A mol:protein length:420 NosL  ali model follow..  15  1MGSSSSGLVPRGSHMTTVDTRAVLALGEEPAESRAAVALALWEDRSIGTAELQAAAEARCGARRPRLHTLYTTNYCDSECKMCSMRKGNHRLDRKFSGRKEITEQLEILYHH---------------------------EGVRGVGFLTGEYEDKHTRIGWAIRTALDLGFERVYFNIGSLGEWIGREDPVTMCVFQESYDRETYRRFMGVPKADFDRRVVSFDRWLDAGYRYVNPGVLVGLSAELVSLVAHGDHLRSRGATADLSVPRMRPAMKSRDTTRVGDDDYLRLMSVVA----------CPEQRLVLTTREPQEFQDVA 346
24 -13.9002a5h_A mol:protein length:416 L-lysine 2,3-aminomutase  ali model follow..  14  110............................................................THRYPDRVLLLITDMCSMYCRHCTRRRFAGQSDDSMPMER-------------IDKAIDYIRNTPQVRD----------------VLLSGGDALLVSDLEYIIAKLREIP-IVRIGSTPELVNMLKKYHPVWLNTHFNHPNEIT------------EESTRACQLLADAGVPLGQSVLLRGVNDCVHVMKELVNKL--VKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHTS.......................... 320
25 -13.9004wcx_A mol:protein length:480 Biotin and thiamin synthesis associated  ali model follow..  12  26LEKAKKATSKDALEIIEKAKNKGITPEELNVEDEDLLNEMFKVARYIKEEIYGNRIVIFAP--------LYVSNYCVNNCRYCGYRHSNEQ--------QRKKLTMEEVRREVEIL---------------------EEMGHKRLAVEAGEDPVNCDYIVDVIKTIYDTKLKNGSVNIAATYKKLKKVGIGTYVLFQETYHRPTYEYMHQGPKHDYDYHLTAMDRAMEAGIDDVGLGVLYGLYDYKYETVAMLYHAGPHTISVPRLRPALNISIDKFPYIVSDKDKLVAVIRMAVPYTGMILST..................... 320
26 -13.8005l7l_A mol:protein length:446 ELP3 family, ELP3 family  ali model follow..  11  2......................................................KKLSRTISGVTPVAVMTKPLPCPGKCIYCPTFAATPQSYTPES-------------PAVLRAKSCEYQAYKQVALRLRIIQDMGHPTDKVELIIMGGTFLSADYQYGFIKDCYDA-VGLCIETR-AEIQRMIDFGTTRVELGVQMLDDDIYKLVERGH--RVSDVAEATCLLREYGLKVHYHWMPGLPGSSPEKDLALSRMVCPDGLKLYPTMVVEGTI-KEGRYTPYPNGTMTGLIADIKALV........................... 269
27 -13.5001r30_A mol:protein length:369 Biotin synthase  ali model follow..  11  1.GSSDYDIPTTENLYFQGSAHRP-LSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTL-------LSIKTGACPEDCKYCPQSSRYKTG-----LEAERLMEVEQVLESARKA---------------------KAAGSTRFCMGAAWKNPHERDLEQMVQGVKAMGLEACMTL-GTLAQRLANAGLDYYNHNLD-TSPEFYGNII--TTRTYQERLDTLEKVRDAGIKVCSGGIV-GLGETVKDRAGLLLQLPPESVPINMLVKVGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSA..................... 280
28 -13.4004fhc_A mol:protein length:368 Spore photoproduct lyase  ali model follow..  8  32FEPEALS--------LGKELYEKFTQMGIKIRETTSHNQVRGIPGETELARYRNAKSTLVVGVRRTLKAIPLATGCMGHCHYCYLQTTLGSKPYIRVYVNLD------------------------IFAQAQKYINERAPEITRFEAACTSDIVGIDHLTHSLKKAATDYGRLRFVTKYEHVDHLLDARHNKTRFRFSINSRYVINHFEPGTSSFDGRL-AAARKVAGAGYKLGFVVIYRGYFELFQELARQLEGMDLSDLTFE............................................................. 289
29 -12.9004u0o_B mol:protein length:296 Lipoyl synthase 2  ali model follow..  12  53.................................................................TATFLLLGPTCTRACAFC----------QVEKGHAPAAVDPEEPTKIAAAV---------------------ATLGLRYVVLTSVARDDLPDQFVATMAAIRQRCPGTEIEVQRDCIAQIVAAQPACYNHNLE-TVRRLQGPVR--RGATYESSLRVLATVKELNPDIPTKS-LGETEAEIIETLKDLRRVGCDRLTLGQYLPPSLSHLPVVKYWTP---EEFNTLGNIARELGFSHVRSGPLVRSSYHAAEG....... 289
30 -12.5001olt_A mol:protein length:457 OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE  ali model follow..  13  11.....................ALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQAVARYPERPLSLYVHIPF---CHKLCYFC----------GCNKIVTRQQHKADQYLDALEQ--------------EIVHRAPLFAGRHVSQLHWGGGTPTY-AQISRLMKLLRENDAEISIEVD-DVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQD--EEFIFALLNHAREIGFTSTNIDLIYGL-ESFAFTLKRVAELNPDRLSVFNYAHLPAAQRKIKDADLPSPQQKLDILQETIAFL........................... 277
31 -11.1006fd2_B mol:protein length:457 Putative apramycin biosynthetic oxidoreductase 4  ali model follow..  9  197..................................................................ITSINGSFGCPYPCRFYCPYPLS---------RKIRTYPVERIVAEF---------------------RQCAELGITAAVFRDPVFSFHRDRTLELCQALKAADTGVP-RLDEEVVAALVDAGCVGVEVGVESGDPDMQATAVR-KRLNLDTVRKFHAVARKAGLKLVFLFLIRETRMSIRRTFDFILELGLADTEFNLSVITPYPGTELHQIAVLSIGDLERASRFVDE............................. 430
32 -10.8002hoq_A mol:protein length:241 Putative HAD-hydrolase PH1655  ali model follow..  11  95..........................................................................................................................................................EVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV---------GDRLYSDIYGAKRVGMKTVWFRY--KHSERELEYRKYADYEIDNLESLLEVLARESSSNKKVHPPRQQI.............. 241
33 -10.5002om6_A mol:protein length:235 Probable phosphoserine phosphatase  ali model follow..  10  97.......................................................................................................................................................ESLVLEGTKEALQFVKERGLKTAVIGNVMFPGSYTRLLLERFGLMIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHI---------GDTYAEDYQGARKVGMWAVWINQ-EGDKVRKLEERGFEIPSIANLKDVIELISKT............................ 235
34 -9.9003ib6_A mol:protein length:189 Uncharacterized protein  ali model follow..  14  32.......................................................................................................................................................EVVLRKNAKETLEKVKQLGFKQAILSNTVIKRVLTNFGIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMV---------GNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPVWDLADVPEALLLLKKISE.......................... 182
35 -9.8604ygq_A mol:protein length:229 Hydrolase  ali model follow..  11  87..........................................................................................................................................................VYPDTIPTLEWLRDTGYKLGIVTSGPKYQR-LKLKLTGLLDYFDVVITRDDVNAIKPEPKIFLYTIERLGVEPGEAVMV---------GDSLSQDVYGAKSVGMTAV----INRNGDRGYNMADYEIRTLYELRKILGGERVD............................ 216
36 -9.4505ul2_A mol:protein length:744 OxsB protein  ali model follow..  9  238DKEGEYTLRDLIKMLKKELKLDEVNGISYVDESGEVKHNVAETVNFKEEVPTPSLDILGEISKFRGALTLETSRGCDYRCTFCPRDH-----------RSWRPLSVEQTLKQL-----------DDILRAGKHFNIKPHIYMADEEFIGELPNGTEAQIIDICEGLLKREEKIKFDFAAKMWHYCALAGADRIFIGVESGSNQQLKRYGKGT--TSEQNIIALRLVSALGINLRIGFIMMKGLDNLKENLDFLERTDALMKPI.............................................................. 503
37 -9.3903umb_A mol:protein length:233 dehalogenase-like hydrolase  ali model follow..  9  101...........................................................................................................................................................FPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQ------ILFVSSNGWDACG----ATWHGFTTFWINR---LGHPPEALDVAPAAAGHDMRDLLQFVQARQSMR........................ 233
38 -9.3802no4_A mol:protein length:240 (S)-2-haloacid dehalogenase IVA  ali model follow..  13  107...........................................................................................................................................................YPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNE------VCFVSSNAWDLGG----AGKFGFNTVRINR---QGNPPEYEFAPLKHQVNSLSELWPLLAKNVT.......................... 237
39 -9.3103um9_A mol:protein length:230 Haloacid dehalogenase, type II  ali model follow..  12  98...........................................................................................................................................................FADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESE------ILFVSCNSWDATG----AKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA........................... 230
40 -9.2701jud_A mol:protein length:232 L-2-HALOACID DEHALOGENASE  ali model follow..  8  97...........................................................................................................................................................FSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA------ILFVSSNAWDATG----ARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFETAAGKAE.......................... 230
41 -9.2202gfh_A mol:protein length:260 haloacid dehalogenase-like hydrolase domain containing 4  ali model follow..  12  116..........................................................................................................................................................LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV---------GDTLETDIQGGLNAGLKTVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSIDCKVSMSV....................... 254
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.