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Query: 6ebo_A mol:protein length:355 Ribonucleoside-diphosphate reductase, beta subunit, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSTKNYYDRSVSPVEYAYFDQSQNMRAINWNKIVDEKDLEVWNRVTQNFWLPENIPVSNDLPSWNELDDDWQQLITRTFTGLTLLDTVQSSIGDVAQIKNSLTEQEQVIYANFAFMVGVHARSYGTIFSTLCTSEQIEEAHEWVVDNEALQARPKALIPFYTADDPLKSKIAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNFYSGYKYQLKVAKLSPEKQAEMKQFVFDLLDKMIGLEKTYLHQLYDGFGLADEAIRFSLYNAGKFLQNLGYESPFTKEETRIAPEVFAQLSARADENHDFFSGSGSSYIIGTSEETLDEDWDFLast
1 -111.0006ebo_A mol:protein length:355 Ribonucleoside-diphosphate reductase, beta subunit  ali model  100  1MGSSSSGLVPRGSTKNYYDRSVSPVEYAYFDQSQNMRAINWNKIVDEKDLEVWNRVTQNFWLPENIPVSNDLPSWNELDDDWQQLITRTFTGLTLLDTVQSSIGDVAQIKNSLTEQEQVIYANFAFMVGVHARSYGTIFSTLCTSEQIEEAHEWVVDNEALQARPKALIPFYTADDPLKSKIAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNFYSGYKYQLKVAKLSPEKQAEMKQFVFDLLDKMIGLEKTYLHQLYDGFGLADEAIRFSLYNAGKFLQNLGYESPFTKEETRIAPEVFAQLSARADENHDFFSGSGSSYIIGTSEETLDEDWDF 349
2 -105.0003n37_A mol:protein length:319 Ribonucleoside-diphosphate reductase 2 subunit beta  ali model follow..  50  1..............................MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF 319
3 -104.0001kgn_A mol:protein length:329 Ribonucleotide reductase protein R2F  ali model follow..  50  2.....................SNEYDEYIANHTDPVKAINWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYYNGDDPLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENHDFFSGSGSSYVIGKAEDTTDDDWDF 329
4 -103.0006gp2_A mol:protein length:345 Ribonucleoside-diphosphate reductase beta chain  ali model follow..  76  6.........MAKIKNQYYNESVSPIEYAQQGFKGKMRSVNWNVVNDEKDLEVWNRITQNFWLPEKIPVSNDLTSWRTLTPEWQELITRTFTGLTLLDTIQATVGDVAQVPNSLTDHEQVIYTNFAFMVAVHARSFGSIFSTLCSSEQIEEAHEWVINTETLQERAKALIPYYVNDDPLKSKVAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLSPEKQAEMKEFVFKLLYELIDLEKAYLKELYEDFGLADDAIRFSVYNAGKFLQNLGYDSPFTEEETRIEPEIFTQLSARADENHDFFSGNGSSYIMGVSEETEDDDWEF 345
5 -103.0001r2f_A mol:protein length:319 PROTEIN (RIBONUCLEOTIDE REDUCTASE R2)  ali model follow..  49  1..............................MKLSRISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYVMGKTVETEDEDWNF 319
6 -101.0004n83_A mol:protein length:319 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  38  1...............................MQTYYKAINWNAIEDVIDKSTWEKLTEQFWLDTRIPLSNDLDDWRKLSHKEKDLVGKVFGGLTLLDTLQSESGVDALRKDVRTAHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKAEIINEIYLNGTALEKKIASVFLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLYDTVGWTEEVKTFLRYNANKALMNLGQDPLFPDSADDVNPI-VMNGISTGTSNHDFFSQVGNGYLLGEVEAMQDDDYNY 317
7 -94.6004bmo_A mol:protein length:322 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA  ali model follow..  35  1...................................MRAVNWNKKEDDFSLMFWKQNIAQFWTEEEIAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYYRKKELYMAMVASVFLESYLFYSGFFYPLYLAGQGKLTASGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTSIGLVEDVNRFVRYNANKGLMNLGLEPKFEEEEINP---IVLNGLRTDTKNHDFFSVKGNGYVKATNVEKLDDDFVF 320
8 -93.7001uzr_A mol:protein length:296 RIBONUCLEOTIDE REDUCTASE R2-2 SMALL SUBUNIT  ali model follow..  46  2..........................TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDDAFRWSEENRNLQRKAEIVLQSYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD............................ 296
9 -91.4004dr0_A mol:protein length:350 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  35  1MGSSSSGLV----------------PRGSHMMTKIYDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQMIVGLYKEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLYDQVGLSHDVKKFIRYNANKALMNLGFDPYFEEEDINP----VLNGLNTKTKSHDFFSMKGNGYKKATVEPLKDDDFYF 337
10 -90.9002rcc_A mol:protein length:346 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  19  2.........MEQLQKRKIYDTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFLDSVQTDYSMR-AAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKW-IRAYEDVNSGKSDFFEQKSRQYAKVSADNGFDE.... 345
11 -88.8001jk0_B mol:protein length:345 ribonucleoside-diphosphate reductase small chain 2  ali model follow..  15  2.....EAHNQFLKTFQKERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISNSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNP-------KIIEKIITEAVEIEKEYYSNSLPVGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVN----PFEFMEDVATA-GKTTFFEKKVSDYQKASDMSKSATDDDF 345
12 -86.5003hf1_A mol:protein length:351 Ribonucleoside-diphosphate reductase subunit M2 B  ali model follow..  16  5.ERPEAAGLDQDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKEFLFNAIETMPYVKKKADWALRWIAKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE-------ERVREIIVDAVKIEQEFLTEALPVGMNCILMKQYIEFVADRLLVELGFSKVFQAE----NPFDFMENISLE-GKTNFFEKRVSEYQRFAVMAETTDDADF 351
13 -86.1002p1i_A mol:protein length:349 Ribonucleotide reductase, small chain  ali model follow..  15  4.VVNISKSASFSKQEKEFSDFQKSKESNEKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKHVLAFFAASDGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPE-------NVVQNIVKEAVEVERSFICESLPCGMNSRLMSQYIEFVADRLLECLGCSKVFHSKN----PFNWMDLISLQ-GKTNFFEKRVADYQKSGVMAQRKENTDF 349
14 -85.7004d8f_A mol:protein length:366 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  18  1MGSSSSGLVHMQADILDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEK--EIFNAYNERAAIKAKDDFQMEITGQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGLRASMFIDYVQHIADRRLERIGLKPIYHTKN----PFPWMSETIDLNKEKNFFETRVIEYQHAASLT........ 359
15 -85.3002uw2_A mol:protein length:332 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 SUBUNIT  ali model follow..  16  1................SMTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEEFLFNAIETMPCVKKKADWALRWIGDKEYGERVVAFAAVEGIFFSGSFASIFWLKKRGPMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSE-------ERVREIIINAVRIEQEFLTEALPVGMNCTLMKQYIEFVADRLMLELGFSKVFRVEN----PFDFMENISLE-GKTNFFEKRVGEYQRMGVMSSPTEDADF 332
16 -84.1001pj0_A mol:protein length:375 Ribonucleoside-diphosphate reductase 1 beta chain  ali model follow..  18  7...................QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFFRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLESIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDEKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIKQECYDLFVQAAQQEKDWADYLFRDGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSN---PIPWINTLVSDNVQVAPQEVEVSSYLVGQIDSEVDTNFQL 375
17 -83.7001mrr_A mol:protein length:375 RIBONUCLEOTIDE REDUCTASE R1 PROTEIN  ali model follow..  19  7...................ATKNDQLKEPMFFGQPVQVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDEKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDEIAEECKQECYDLFVQAAQQEKDWADYLFRDGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSN---PIPWINTLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD-NF 373
18 -83.1006cwo_A mol:protein length:344 Ribonucleotide reductase  ali model follow..  13  3...................SSSSGLVPRGSHMSIFDKRVNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHALSLAEKTAVKNSLLAIAQIEVAVKSFWGN-IYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDEFEKLLDVRRRVDYLSNVLKDTKSQDNRKYMVSLILFSILIENVSLFSQFAILLSFRFKGYMKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDILDWIFEESIKKGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSLDDFFAKRPVEYTKHDKSITANDLF.. 338
19 -82.9001biq_A mol:protein length:375 PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE  ali model follow..  18  7...................QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDEKKLYLCLMSVNALEAIRYYVSFACSFAFAERELMEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDPEMEECKQECYDLFVQAAQQEKDWADYLFRDGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSN---PIPWINTLVSDNVQVAPQEVEVSSYLVGQIDSEVDTNFQL 375
20 -82.4002o1z_A mol:protein length:311 Ribonucleotide Reductase Subunit R2  ali model follow..  15  3.VLNISKIPIFSKKEKKFSDLQKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDNEKHFIKHVLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKEMNLFHAIENIPAVKNKALWAAKWINDTNFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCGMNSRLMSQYIEFVADRLLECLGSPKIFHAK----NPFNWMDL................................. 311
21 -81.6001h0n_A mol:protein length:390 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE  ali model follow..  16  43LASKAARRIFQDSAELESKAPTNPSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEEYLFNAIETMPCVKKKADWALRWIGDKEYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAE-------QRVREIITNAVRIEQEFLTEALPVGMNCTLMKQYIEFVADRLMLELGFNKIFRVEN----PFDFMENISLE-GKTNFFEKRVGEYQRMGVMSNSTEDADF 390
22 -79.9002vux_A mol:protein length:326 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2 B  ali model follow..  16  3.SGVDLGTENLYFQSMSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKRELFNAIETMPYVKKKADWALRWIADRKFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE-------ERVREIIVDAVKIEQEFLTEALPVGMNCILMKQYIEFVADRLLVELGFSKVFQAE----NPFDFMENISLEGKTN......................... 320
23 -78.7001jk0_A mol:protein length:419 ribonucleoside-diphosphate reductase small chain 1  ali model follow..  15  62LSKDAENHKAYLKSHQVHRHKLKEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNMNENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKEEFLFNAIHTIPEIGEKAEWALRWIQDADFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDP-------AIVEKIVTEAVEIEQRYFLDALPVGMNADLMNQYVEFVADRLLVAFGNKKYYKVE----NPFDFMENISLA-GKTNFFEKRVSDYQKAGVMSKSTKNEDF 413
24 -78.0001pfr_A mol:protein length:340 PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE  ali model follow..  19  7...................QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDEKKLYLCLMSVNALEAIRFYVAFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIKQECYDLFVQAAQQEKDWADYLFRDGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSN---PIPWIN.................................. 336
25 -76.4005olk_A mol:protein length:430 Ribonucleoside-diphosphate reductase, beta subunit 1  ali model follow..  12  98......................RNKRALERKTNIFEKRINLKPYEYPELNEYVAAIRHSYWIHTEFNFTSDIQDFKTGLSEVERSAIKNTMLAISQIEVAVKTFWGDVHHRLPKPEIAAVGATFAESEVRHHDAYSHLLEILGLNEEFKELKKKMKRVHYLETSLKHAKSDDDREYTESILLFALFIEHVSLFSQFLIIMAFKHKNMLKGISNAVEATSKEEQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFEAESKVVDWIFEKFLPKAVINEFLKNRFNKSLEAIGLEKLFDIDEALLQETEWFDDEIIGTKHGDFFVKRSINYSKRTQSITSDDLF.. 430
26 -76.3003vpm_A mol:protein length:286 Ribonucleoside-diphosphate reductase subunit M2  ali model follow..  16  2........................GVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEAVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEEFLFNAIETMPCVKKKADWALRWIGDKEYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSE-------ERVREIIINAVRIEQEFLTEALPVGMNCTLMKQYIEFVADRLMLELGFSKVFRVE----NPFDFM................................... 286
27 -66.0003ee4_A mol:protein length:323 Probable ribonucleoside-diphosphate reductase  ali model follow..  13  1.............................MAGMTRTRSGSLAAGGLNWPLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAEALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDAN-WTVFETRMNELIPLALRLIEEGFALYGDQDLSKDDFLQYSTDKGMRRFGTISNARGRPVAEVDYSPAQLED---------TFADEDRRTLAAASA.......... 317
28 -61.8004hr0_A mol:protein length:316 Ribonuleotide reductase small subunit  ali model follow..  8  2.....................AVDDDDKMVHHDGFQTVKATIDWEHPMFKLYEKAKRNGKWNPADIDFSQDQKDFASLTSEEKISALPLVAGFSAGEEAVTLDILPMALARQGRLEDVLFLTTFMHDEAKHVEMFSRWQQAVGIGQMDLSVFHNDHYKRIFYEALRLYADDSPEAVIRAATVYNMIVEGTLAESGYYTFRQIKKAGLFPGLLQGIDYLNMDEGRHIQFGIYTIQRIVNEDERYYELRYMDELWPHVIGYVDYLTELGKRQQQLEIDYDLLRHYVIKQFNLRKKQISRTKRVDVVEG........................................... 302
29 -43.8005uxg_A mol:protein length:220 aldehyde deformylating oxygenase  ali model follow..  9  2......................................................................D-KNWFSTPQEIREGIKYLSAHFYPASIMDRWKILK-KLSFEKAKIIANYSLQQVIEEIEHFDFFNEYFKEDPLTTVRLPPSYIKLFDGLVEDFQS------SRWRENIATRFHMITEGVLATVGLKILNETSRKYNLLKFNEGIKRIIEDEARHVSFGLSLIEDKEYAVKR---------VEELFPLAVQIVKEGKDKIEPLGYSIQELVNLMEELKKARINKI...................................................... 209
30 -32.7005ux2_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  9  1.......................................................................MTQLDFASAAYREAYSRINGVVIVGEGLANRHFQMLAR---RIPADRDELQRLGRMEGDHASAFVGCGRNLGVVADLPLA------RRLFQPLHDLFKRHDHDGNRAECLVIQGLIVECFAVAAYRHY----LPVADAYARPITAAVMNDESEHLDYAETWLQRHFDQVKA----RVSAVVVEALPLTLAMLQSLAADMRQIGMDPVETLASFSELFREALESVGFEA.................................................. 211
31 -29.2005uxi_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  8  3..................................................................QLTDQSKELDFKSETYKDAYSRINAIVIEGEQEAHENYITLAQ---LLPESHDELIRLSKMESRHKKGFEACGRNLAVTPDLQ-------AKEFFSGLHQNFQTAAAEGKVVTCLLIQSLIECF------IAAYNIYIPVADDFARKITEGVVKEEYSHLNFGEVWLKEHFAESKA----ELELANRQNLPIVWKMLNQVEGDAHTMAMEKDALVEDFMIQYGEALSNIGFST.................................................. 218
32 -28.9004z5s_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  11  1.................................................................MPELAVRTEFDYSSEIYKDAYSRINAIVIEGEQEAYSNYLQMAE---LLPEDKEELTRLAKMENRHKKGFQACGNNLQVNPDMPYAQEFFAG------HGNFQHAFSEGKVVTCLLIQALIIEAFAI-----AAYNIYIPVADDFARKITEGVVKDEYTHLNYGEEWLKANFATAKE----ELEQANKENLPLVWKMLNQVQGDAKVLGMEKEALVEDFMISYGEALSNIGFST.................................................. 217
33 -27.9004quw_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  8  1.................................................................MPQLEASLELDFQSESYKDAYSRINAIVIEGEQEAFDNYNRLAE---MLPDQRDELHKLAKMEQRHMKGFMACGKNLSVTPDMGFAQKFFER------HENFKAAAAEGKVVTCLLIQSLIIECFAI------AYNIYIPVADAFARKITEGVVRDEYLHRNFGEEWLKANFDASKA----ELEEANRQNLPLVWLMLNEVADDARELGMERESLVEDFMIAYGEALENIGFTT.................................................. 217
34 -27.7004kvr_A mol:protein length:244 Aldehyde decarbonylase  ali model follow..  10  2........................................................MPTLEMPVAAVLDSSEALPDFTSDRYKDAYSRINAIYIEGEQEAHDNYIAIGT---LLPDHVEELKRLAKMEMRHKKGFTACGKNLGVEADMD------FAREFFAPLRDNFQTALGQGKTPTCLLIQALLEAFAI------AYHTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCRE----ELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNT.................................................. 231
35 -27.4005uwz_A mol:protein length:243 Aldehyde decarbonylase  ali model follow..  8  1.................................................................MNRTAPSAALDYRSDTYRDAYSRINAIVLEGEREAHANYLTLAE---MLPDHAEALKKLAAMENRHFKGFQSCARNLEVTPDDPFA------RAYFEQLDGNFQQAAAEGDLTTCMVIQALIECFAI-----AAYNVYIPVADAFARKVTEGVVKDEYTHLNFGQQWLKERFVTVREGIERANAQNLPIVWRMLNAVEADT-------QMDKEAIVEDFMIAYGEALGDIGFSM.................................................. 218
36 -26.3004pgi_A mol:protein length:250 Aldehyde decarbonylase  ali model follow..  10  14................................................................DSTVGSSEALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGT---LLPDHVEELKRLAKMEMRHKKGFTACGKNLGVKADMD------FAREFFAPLRDNFQTALGQGKTPTCLLIQALLIEAFAISAYHTYIPVSD----PFARKITEGVVKDEYTHLNYGEAWLKANLESCRE----ELLEANRENLPLIRRMADQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNT.................................................. 231
37 -25.4002inn_C mol:protein length:333 Phenol hydroxylase component phL  ali model follow..  7  1MSIEIKTNSVEPIRHTYGHIARRFGDKPATRYQEASYDIEAKT-EHTLNDPTRTAIRMEDWAETSFGFCEKRNLLTRLSEETQKQLLRLLVPLRHVELGANMNNA-KIAGDATATTVSQMHIYTGMDRLGIGQYLSRIALMIDTGAALDESKAYWMDDEMWQPMRKLVEDTLVVDDWFELTLVNILIDGMMYPLVYDKMDQWFESQGAEDVSMLTEFMRDWYKESLRWTNAMMKAVAGESETN-RELLQKWIDHWEPQAYE-----ALKPLAEASVGIDGLNEARAELSARLKKFELQS.................................................. 328
38 -25.1005k53_A mol:protein length:262 aldehyde deformylating oxygenase  ali model follow..  10  24..............................................................SEFMPQLEASPTIDFQTETYKDAYSRINAIVIEGEQEAHDNYLTLAE---LLADKKAELVGLSKMENRHMKGFQACGRNLKVTPDMA------FAKQFFSELHKNFQTAAAQGQIVTCLLIQSLIECFAI------AYNIYIPVADDFARKITEGVVKEEYSHLNFGEVWLQAHFEESKA----ELEAANRQNLPIIWKLLNAVADDARVLGMEKDALIEDFMIAYGEALGNIGFNN.................................................. 243
39 -24.4005k52_A mol:protein length:265 Aldehyde decarbonylase  ali model follow..  10  24..............................................................SEFMPQLEATAAIDYQSETYKDAYSRINAIVIEGEDEAANNYVRLAE---LMPEQSEELASLAKMEARHKKGFTACGKNLNVTPDMDFA------KKFFSDLHGNFQVAAAAGNIVTCLLIQALIEAFAI------AYNVYIPHADDFARKITENVVKDEYLHLNFGEQWLKANFESAKD----ELERANRENLAIVWRMLDEVAGDALVLGMEKEALMEDFTIAYQEALQNIGFST.................................................. 243
40 -21.0004mud_A mol:protein length:235 Ring oxydation complex/ phenylacetic acid degradation related protein  ali model follow..  12  2....................................................................MQKLRSVKEVPQDLTNTLVNIIELRADFELAMVEQYSP-WLVNAPTVDSRLFVAKLVSDELNHGWQLVRLLEEFKVKDVIERISNARLGIHKLEVSNL------PLFNWEDVIAFTFLVDGA------LYQLKILKDCSFEPLSTLASSMIKEEESHIFFSQNELRNYQNKNRQGAINFWFPRAVEMLHMTWSLNETHLRDLNISDLTKNDLINGYIKTTNEELKKCGYN................................................... 220
41 -20.8003pvr_A mol:protein length:311 Phenylacetic acid degradation protein paaA  ali model follow..  10  2......................................................RSTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGN-WITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCARED------IYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGA------IVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQ-KQMLQDAINRFWWPALMMNSPNSARSLTWKIKRDELRQRFVDNTVPQVEMLGMT................................................... 241
42 -20.3004iit_A mol:protein length:320 Phenylacetate-CoA oxygenase subunit PaaA  ali model follow..  9  14...............................................................QRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGN-WITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCARED------LYQKMLDGQMKYSSIFNYPTLSWADIGVIGWLVDGA------IVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGNEAQ-RQMLQDAINRFWWPALMMNSPNSARSMAWKISNDELRQRFVDNTVPQVEILGMT................................................... 244
43 -20.2002jcd_A mol:protein length:345 N-OXIDASE  ali model follow..  9  10MREEQPHLATTWAARGWVEEEGIGSATLGRLVRAWPRRAAVVNKADILDEWA-DYDTLVPDYPLEIVPFAEHPLFLAAEPHQRQRVLTYNERVIATEQLIAEPAFDLVMHGVDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCI---NALLALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRALVRCLPIALEAFAEQDLSALLLE---------------------LNAAGIRGAEEIVGDLRSTAGGTRLVRDFSGARKMVEQ.................... 322
44 -20.0001za0_A mol:protein length:275 POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE)  ali model follow..  11  16..............................................PVVEANMTRHLDT-WFAHDY--FLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFILEDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPV--------ANEDVRVQHVMKGYRAEKYTQVETLVYMAFYE----RCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAA-RAADLDVLGADIEAYRDKLQNVADAGIFGKPQLRQLISDRITAWGLAGE................................................. 266
45 -19.9001t0q_B mol:protein length:330 toluene, o-xylene monooxygenase oxygenase subunit  ali model follow..  10  1MSEQQPEALKPLKTWSHLAGNRRRPSEYEVVSTNLHYFTDNPERTWYKKYCFDSPLKHDDWVQGLFDQLNDRGHDQMLTREWVETLARFYTPARYLFHALQMG-SVYIHQIAPASTITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRERNDPAWQGFRELIEKALIAWDWGEAFTANLVTKPAVEEALLQQLGSLAQSEGDTLLGLLAQAQKRDAERHRRWSSALVKMALEKEGN------REVLQKWVAKWEPLADKAIEAYCSALPDGENAIVEAKSASRYVRQMMGL.................................................... 330
46 -19.6003dhg_A mol:protein length:500 toluene 4-monooxygenase hydroxylase alpha subunit  ali model follow..  9  1MAMHPRKELTRATNWTPSYVTEEQLFPERMSGHMGIPLEKWESYDEPYSYPEYVSIQRE--AYSVKAALERAKIYENSDPGWISTLKSHYGAIAVGEYAAVTGEG-RMARFSKAPGNRNMATFGMMDELRHGQLQLFFPHEYCKKDRQWAWRAYHSNEWAAIAAKHFFDDIITGRDAISVAIMTFSFETGFTNMQFLGLAADAAEAGDYTFANLISSIQTDESRHAQQGGPALQLLIENGKREEAQKKVDMAIWRAWRLFAVLTGPVMDYYTSQSFKEFMYEWIIGQFERSLIDLGLDKPWYWDLFLKD---WNPAAGVTPEERDWLEEK---Y............... 362
47 -19.1005hyg_A mol:protein length:317 Uncharacterized protein  ali model follow..  10  35.........................................................GRPDFREDMIPFRGHPIWERLSDETRSRLLAYNRNTVLIEQRIANPAFELVIGGA-GQQLELAVAQAMVDEQYHTLMHINGSAVTRRMRRSDFSDRVLPDSHITTIHQEHLDRCEEPWQRSLTTLGFATVAEISINAYLDLLA--DDQEIQVVNSTTVKLHNRDEYCHASISGEMMKQVYEALPADRRRFLLEKVVAGLEAFVAPDFTTWESI---------------------VAFEGVPGWEKAAAEVREAQGGTHLVQDHSGIHTLLTEMDV-----------QVEFGW 303
48 -18.2001mhy_D mol:protein length:521 METHANE MONOOXYGENASE HYDROXYLASE  ali model follow..  10  42..................................PTKYHMANETKEQ-----FKVIAKEYARMEA-DGLTRLGAGNKVHPRWGETMKVISNFLEVGE-YNAIAASAMLWDSATAAEQKNGYLAQVLDEIRHTHQCAFINHYYSKHAGHNDARRTRAIGPLWKGMKRVFADGFISGDAVECSVNLQLVEACFTNPLIVAVTEWASANGDEITPTVFLSVETDELRHMANGYQTVVSIANDPANTDLNNAFWTQQKYFTPVLGYLFEYGSKFKVEPWVKTWNRWVSEDWGGIRLGKYGVESPRSLRDAKRDPLGFARLALPDEEDQAWFEANYPGW............... 374
49 -18.0003dhg_B mol:protein length:327 toluene 4-monooxygenase hydroxylase beta subunit  ali model follow..  10  62.................................SPLKHDNWDAFTDPLVYRTYNLMQDG--VQSLFDQFNEREHDQMVREGWEHTMARCYSPLRYLFHCLQMSSA-YVQQMAPASTISNCCILQTADSLRWLTHTAYRTHELSLTYPDAGLGEHERKEPGWQGLRELMEKQLTAFDWGEAFVSNLVVKPMIVESIFKPLQQQAWENNDTLLPLLIDSQLKDAERHSRWSKALVKHALENPDN--HAVIEGWIEKWRPLADRAAEAYLSMLSSDILPAQYLERSTSLRAS--ILTV...................................................... 327
50 -17.3002inn_A mol:protein length:511 Phenol hydroxylase component phN  ali model follow..  9  1MVSKNKKLNLKDKYQYLTRDEPTYQDKKDIFPEEDFEGIDWSQWEDPLTMDAYWKYQAE--LYAIFDAFAQNNGHQNISDARVNALKLFISGISPLE-HAAFQGYSKVGRQFSGAGARVACQMQAIDELRHSQTQQHAMSHYNKHNGLHDGPHMHDRVWYLSVPKSFFDDARSAGPFEFLTAISFSFEYVLTNLLFVPFMSGAAYNGDMATVTFGFSAQSDEARHMTLGLEVIKFILEQHEDN-VPIVQRWIDKWFWRGFRLDYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANDAQATNFHTWIPEKEEMDWMSEK---YP-DTFDKYYRPRYEY 379
51 -17.3001t0q_A mol:protein length:498 toluene, o-xylene monooxygenase oxygenase subunit  ali model follow..  9  1MSMLKREDLTRTTNWTPKYVTENELFPEEMSGARGISMEAWEKYDEPYTYPEYVSIQREKDSGAYKAALERDGFVDRADPGWVSTMQLHFGAIALEE-YAASTAEARMARFAKAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKATNEWAAIAARSFFDDMMMTRDSVAVSIMTFAFETGFTNMQFLGLAADAAEAGDHTFASLISSIQTDESRHAQQGGPSLKILVENGKKDEAQQMVDVAIWRSWKLFSVLTGPIMDYYTNQSFKEFMLEWIVAQFERQLLDLGLDKPWYWDQFMQD---WDPAAGVSPEEREWLEEK---YP------GWNDTW.. 369
52 -15.9001fyz_A mol:protein length:527 METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN  ali model follow..  11  1MALSTAKAATDALAANRAPTSVNAQEVHRWLQSYATKYKMANETKEQ-----FKLIAKEYARMEAQDALTRLNAGVRVHPKWNETMKVVSNFLEVGE-YNAIAATGMLWDSAQAAEQKNGYLAQVLDEIRHTHQCAYVNYYFAKNAGHNDARRTRTIGPLWKGMKRVFSDGFISGDAVECSLNQLVGEACFTNPLIVAVTEWAAANGDEITPTVFLSIETDELRHMANGYQTVVSIANDPASAKYLNFTPVLGMLFEYGSKFKVEPWVKTWDRWVYEDWGGIWIG-----RLGKYGVESPRSLKDAKQDPTGFFRLALPDQEEMEWFEAN---Y............... 376
53 -15.5003pvr_B mol:protein length:259 Phenylacetic acid degradation protein paaC  ali model follow..  8  1.............................................................................MGSSGSNQLTAYTLRLGDNCLVLSQRLGEWCGH-APELEIDLALANIGLDLLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLL-----EQPNGNFADTIARQYFIDAW------VALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVS-GQKMQQAINKLWRFTAELEIDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLN................................................... 214
54 -15.2003per_A mol:protein length:481 Benzoyl-CoA oxygenase component B  ali model follow..  9  1.......MINYSERIPNNVNLNENKTLQRALEQWQPSFLNWNSSNYDVYLRTAVSVDPKGWADFGYVKMHDQDVWQEVPGEYRSTLRRIIVTQGDTEPASVEQQRHLGL-TAPSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREEGEALLERRSGDEDNPRILTAFNEKPDWLSFFMFTFITDRDGKFQ-----LASLAESAFDPLARTCKFMLTEEAHHLFVGESGIARVIQRTCEV-MKELGTDDPAKLRAAGVIDLPTLQKYLNKGRFEEEKIGDDHKLQNSEYEVMDVA................................................... 341
55 -14.6001oq4_A mol:protein length:363 Acyl-[acyl-carrier protein] desaturase  ali model follow..  6  1.ASTLKSGSKEVENLKKPFMPPREVHVQVTHSMPPQKIEIFKSLD-EENILVHLKPVEKCWQPQDFGFDEQVRELRERAKEIPDDYFVVLVGDMITEEAL--TYQTMLNTLDSPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQ--------EKTIQYLIGSGMDPRTENSPYLGFIYTSFQE-RATFISHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKI............................................................................................. 263
56 -14.3004iit_C mol:protein length:251 Phenylacetate-CoA oxygenase subunit PaaC  ali model follow..  10  2................................................................................NNPNPVATYALRLGDNGLVLAQRLGAWCGH-APELEIDLALANIGLDLLGQARNFLSYAAELNGCGDEDTL--AFGRDERQYSNLLLVEQPNGN--------ADTIARQFFIDVWHVALYSRLVNSRDAQLAAIAAKGLKEVRYHLRFSRGWLERLGNGTELS-NRKMQQAVDNLWRFTGELEVELSLVEQGIAVDPRELQAEWQSAVHTALLDSGLQ................................................... 212
57 -13.8003sid_A mol:protein length:180 Symerythrin  ali model follow..  7  2..........................................................................GLNYNQEDFM-TDANAASSIEVEMYECDCMYPTFAEIARRPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRALETALEV---ETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLE............................................................................................................... 178
58 -13.6002uw1_A mol:protein length:338 PLASTID DELTA4 MULTIFUNCTIONAL ACYL-ACYL CARRIER PROTEIN DESATURASE  ali model follow..  6  29....................................................HLKSVEKSWQPQDYGFEEQVRELRERAKEIPDDYFVVLVGDMITEEAL-PTYMSMLNRCDEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRK--------EKTIQYLIGSGMDIKSENSPYLGFIYTSFQE-RATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKI............................................................................................. 238
59 -13.1001vjx_A mol:protein length:157 putative ferritin-like diiron-carboxylate protein TM1526  ali model follow..  10  1.............................................................................MGSDKIMKVSDILTVAIRLEEEGERFYRE--LSEHFNGEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEILRRKDLTLKEVLDIAISV---DSIILYYE------LKDGLVNSDAQKTVKKIIDQEKEHLRKLLEMKRES................................................................................................................. 150
60 -11.3002fzf_A mol:protein length:175 hypothetical protein  ali model follow..  8  17.................................................................................ADFSLEELLGMAIKAEI-GAREFYKSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFP-----KEHIGPELQPVARELEKVQDIIDLIRWAMKAEAAEFYLK------LEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLLNW.............................................................................................................. 164
61 -11.3004r42_A mol:protein length:236 Alr3090 protein  ali model follow..  8  13............................................................................NIGEANPRFAQLLLEQFGATGELSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEAYKSTLFAVRGMGPHFL-SYLNEGGDVVRDLRANIAAEA----GARQTYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLGKLTDPFFGNVQPDETVALYYNLSSNG...................................................................................... 204
62 -11.2003dde_A mol:protein length:239 TENA/THI-4 protein, Domain of Unknown Function with a Heme Oxygenase-like Fold  ali model follow..  8  37......................................................................TKALYAIYMTETYHYTKHNAKNQALVGIMGKD----------LPGKYLSFCFHHAHEEAGHELMALSDIASIGFDRED---VLSSKPLPATETLIAYLYWISATGNPVQRLGYSYWAENVYGYIDPVLKAIQSTLDLTPQSMKFFIAHSKIDAKHAEEVNEMLHEVCKTQED------VDSVVAVMENSLVLTARILDDVWK............................................................................. 219
63 -10.4003q4o_A mol:protein length:196 Uncharacterized protein MJ0754  ali model follow..  6  17............................................................................PISEEEKEGLIEMR---------EEEKLARDVYLTLYNKWKLQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEV-DALKVGATIE-----LDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISK--EEYEEIISSSTE........................................................................................ 185
64 -10.1003q4n_A mol:protein length:193 Uncharacterized protein MJ0754  ali model follow..  6  11...........................................................................QPISEEEKEGLIEMR---------EEEKLARDVYLTLYNKWKLQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEV-DALKVGATIE-----LDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISK--EEYEEIISSSTE........................................................................................ 180
65 -10.0001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  5  1.............................................................................MKDLKGTKTAENLKQGFIGESMANRRYLAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDK---------------------PIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQLKG............................................................................................................... 142
66 -9.9402oh3_A mol:protein length:167 COG1633: Uncharacterized conserved protein  ali model follow..  8  4...................................................................................YTLAEFLAHAIALETEAAERYLADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDEN-----DIHYLMTPYHALRYARDNE-----RGMEYYKEAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTPRPSITWSEDADPAQCVD............................................................................................... 167
67 -9.5304di0_A mol:protein length:144 Rubrerythrin  ali model follow..  4  3...........................................................................GSMAQLKGSKTEENLKYAFAGESQANRRYLASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPF-----------------------GTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGLVD............................................................................................................... 144
68 -9.0103ogh_B mol:protein length:171 Protein yciE  ali model follow..  8  4...............................................................................MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIK-----DSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEI-ACYTSLLAAAKNAGDTASIPTIEAILNEEKHMADWLIQHIPQTTEK.............................................................................................................. 157
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.