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Query: 6ey1_A mol:protein length:257 HIF prolyl hydroxylase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMDERRPKIGCDKTGLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYPGSGLGYIRHIDNPNRDGRCVTVLYYLNPNWNSQDCGGQLWLYPNNENKVVKIDPIFDRLLLFWSDRRNPHEVKPAYAMRYAITLWYFDEKERALSSQNGTLast
1 -104.0006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model  100  1MGSSSSGLVPRGSHMDERRPKIGCDKTGLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRGDKIAWIGGDERGCEAIKYLSSCVDSLISRCNGRLGNYMITGRTKCMVACYPGSGLGYIRHIDNPNRDGRCVTVLYYLNPNWNSQDCGGQLWLYPNNENKVVKIDPIFDRLLLFWSDRRNPHEVKPAYAMRYAITLWYFDEKERALSSQNGT 251
2 -89.9005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  48  2........................SHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYL 230
3 -89.9002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  50  1............................MPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYL 225
4 -89.5004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  50  2...............................SQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYL 223
5 -89.4005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  49  3..............................SEEALPSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDADERARAKDK.. 223
6 -89.3005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  48  2........................SHMASPNGQTKPLPALKLALEYIVPAMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLICHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNCNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERAAAKVKYL 230
7 -88.7002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  51  1..................................MALPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYL 219
8 -87.0002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  49  2........................SHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYL 230
9 -75.9004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  26  1MGSSSSGLVPRGSHMASH------------------ISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAEGELNPAGVGRGATQETIRGDQIQWIDPGQ-----AEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRRDDDRRMVSAVLYLNEGWQPHDGGQLRMFLAD--GVEHDVEPVAGCLVVFLSGE-VPHEVLPAGRERLSLTGWFRRRGNDP....... 222
10 -53.2003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  12  1MKRKTAEVKGEKERNSKQISLEEDKIKGMFNPKIWDKTFQDGLKKEIEDS-QPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVVKVDKHRLSIQGWYHIPQVGEEGYIPG. 258
11 -51.4004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  12  1MSSGVDLGTENLY-----QSMLEEDKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVEEVDKHRLSIQGWYHIPQVGEEGYIPG. 255
12 -50.7004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  21  1MGSSSSGLVPRGSHMNGKRPAEPGPARVGKKGKKEVMAEEETLKKQVAEAWDPFLHCVIPNFIQSQFLEGLQKELMNLDFHEK---------------YNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDIS---STIDMSCAKYEFTDALLCHDDE--LEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQVKSLIPSWNKLVFFEVSPVSFHEVLSEEKSRLSISGWFHGPSLTRPPNYFEP 265
13 -49.8003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  12  2.....................LEEDKIKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS--KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRSFILYLPDPDRKWKSHYGGGLRLFPSILPDPSAKLVPQFNQIAFFKLPGFSFHDVVKVDKHRLSIQGWYHIPQVGEEGYIPG. 239
14 -35.4005iqs_A mol:protein length:315 WelO5  ali model follow..  11  1MKSDYDIPTTENLYFQGSMSNNTVSTKPALHFLDINATEVKKYPTAIQDIIRSFDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEGHAIVGQSPDLKDYFASSAIFRQACRTMFQGSPDFEEQVESIFHSLSGLPVEIPTTIRLLLEGREIAVHVGNDFLLSDQLSYFIPLT---VPEAGGELVVYSLENQSQSVAYAPGPGDMLLFNGG-RYYHRVSEVNSPRRTIGGFLAFSKQRD....... 302
15 -32.9003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  8  2.......................QHTYPAQLMRFGTAARAEHMTIAAAIHAADEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATSVTLGQLQ----EQGDKLVSKAAEYFGIACRVNDGLRTTRFVRLFSDAATRRVYEPFEAPFNFAPHCDLKRSFPRQLGGFLTIQ---GADNDAGMVMWDNRPESAKIMLKPQPGQLTLFQS--KNLHAIERCTSTRRTMGLFLIHTEDGWR...... 270
16 -32.8003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  11  1..........................................MGSDKIENLYFQGMLEIPNVFSKQEVSHLREQL----DARRWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSA------ALPLQFYPPLFNRYQGGETFGYHIDPDGMIRTDLSATLFLSEP-ENYQGGELVIQDTYGQ---QSIKLSAGSLVLYPSS--SLHQVTPVLSERTAAFMWLQSMVRDEGQRR... 198
17 -29.2005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  15  33........................................................EKIDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKPKSRNSEQTWFMPGE------HEVIDKIQKKTREFLNSKKHCIDKYNFEDVQVARYKPGQYYYHHYDACPKDQRLATLMVYLK---APEEGGGGETDFPTLK---TKIKPKKGTSIFFWVYKETLHAGLPVKSEKIIANQWIRAVK.......... 222
18 -26.3005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  15  43........................................................VVLGNVLSDEECDELIE------SKSKLARSKVGSSRDVNDIRTSSGAFLDDNE--------LTAKIEKRISSIMNV------ASHGEGLHILNYEVDQQYKAHYDRSAANNRISTLVMYLN---DVEEGGETFF-----PKLNLSVHPRKGMAVYFEYNELTLHGGAPVTKEKWIATQWVRRGTYKPPGP.... 221
19 -26.2006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  8  9VPRGSVPTEVTLYDLPTRKEEWEKKYLHPEFLSHLQNFKDFDYTEICND-------VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNYKTKDI--NLAFVVKYDMERQSELAPHHDS--STYTLNIALNEYGKEYT---AGGCEFIRHKF----IWQGQKVGYATIHAGKLLAYHRALPITSKRYILVSFV.............. 228
20 -25.6002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  18  26........................................................FLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVD-SEIRTSTGTWFAKGE-------------DSVISKIEKRVAQVT-LENHEGLQVLHYHDGQKYEPHYDPEHGGQRVVTMLMYLT---TVEEGGETVL--SECAKRGLAVKPIKGDALMFYSDPASLHGSCPTLKDKWSATKWIHVAPIG........ 224
21 -21.4003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  10  15..........................................................LSDHGPAIDAEEMESSCYAIAEDDEAGQGWCEENGYPGYTSYASLTDLPWRF------PIFADLVKSLDAHVAAFAEDLEFDLDGRALELEDLPEGGSHASHIHP----HSVISGTTYVS---MPGGTSALKLEDPRHLRQFIYVTPAVGDVLLWES--WLRHEVPMSEDDRISVS................. 198
22 -21.4002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  11  19..........................................................LSEHGPALDPAEFAASCYSIAEDDDAGQEWCEREGYPGYTSYASLTDLPWRF------PIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIPEGGVHGSHIHP----HSVISGTTYVA---MPEGTSALKLEDPRLPRTFRSVAPKVGDVLLWES--WLRHEVPMAEEDRISVS................. 202
23 -21.2004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  9  1....................................MTTATLDRAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLEKQDWAPERDLLREELAQLAAAFVDGPVVPTAYALVLKEPYRAAEVPWHRDRV-GPRTVCNLSICLDD--AGPHNGCLEAVPGSATGPVVPVPVSQGDVVVH--DVRLVHGSGPNGSWRRTIVIEYADPA.......... 218
24 -21.0004xbz_A mol:protein length:334 EvdO1  ali model follow..  16  1MGSSSSGLVPRGSHMMSSVGDLRVVNRIAECDIR-----RTGLLPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAWSTRSMEDTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGHPLLLRIMEQLVGP-NLIPTWDSMVFKTPAGAPRLAWHRDGVTGAGRVIDAGIYLDP---APEDNCVWCIPESDTTGAVPAVMQPGDLLLH--NILTLHGAPAVGKQRRVIYFEYRPAEVEWQLGPHSA 269
25 -20.5004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  8  5...........................TVDSKPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQ-----MAIPPPKGERLLADKYPPHFKYVPNVATTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAQPFHRDDAEAPPVSLSVIFPLTE---TEENGATEVIGTPERDQAVLATMDPGDVLIVRQ--RVVHNRTTAGKPRRVVLAYF.............. 228
26 -20.4004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  12  1....................................LHMVPALTREQLYIFDTTGFLVIPGVFGSGEVESFRSELERLDTV---------DPGFPRTRRYPDLPAASPVFARLALDDRLLAPVRDVVNQPLRLLEGYGLRRTKDSVLYLHGGRDLSITHTYHDGKLYCPYVKALVYLSDIQSPEDGSFCYV-VDSGFPTLSDVFVRSGDVLLL--NEALMHGTRRTEGDRLLTAFGY.............. 227
27 -20.4005ybm_A mol:protein length:314 PrhA  ali model follow..  16  1MGSSSSGLVPRGSHMPPRLQRFPA----------------TASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEK----IPVEVTNNGNSNDRTKRFSKCVIASPTFRNEIIESDLMHELCDRVFSKPGEGMGYHFNDNMVIEVQPGAPAQRLHRDQEAGPECVINFFCAVTP---TEENGATRLVPGSGKIETVPAIMQPGDCYLMSG--KVIHG-ATTTDRRRALALAIIRRELRPMQAFSLS 257
28 -20.2005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  15  1MGSSSSGLVPRGSHMPSRLQKFPA----------------TAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQ-------VQVTNDGNSNDRVKRFSKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGMGNDTMVIEVQPGAPAQRLHRDQPDAPECLVNFFCAVTP---TVENGATRLVPQYGKIDSVPAIMQPGDCYMMSG--KVIHG-ATLSDQRRALAFSTIRRELRPVQAFPLW 257
29 -20.0004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  10  2...................RGSGSMTSQHQEHTGTKRFSIQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPLKADR-ADKKDDPHFWLADFIPDHVARVHNLVDFSHCFRHEILNHELLHKICRLTFEESGDYWLGYGAVIENGPGTTEQKWHRDQPDAPEGMLNFFTALTD---DAETGKTQYIEPDADHPIEYVGLKPGDTTIVSG--KITHRGSDSDKMRRAMPIMI.............. 241
30 -19.8005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  11  2........................MTSKDHVKSQIPRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIE--PIPAAKTKDHPNHVLSTTTRLVNVLAPISKAYREDVLNSKVLHRICSDAFHVYGDYWVLMGAVMELAPSNPAQPLHRDMPDAPATSINFLVALS-PFTAENGATHVI-SNVSMDATVRALMNPGDALLITDS--TIHC-TTGTETRRLLTITM.............. 231
31 -19.6005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  10  5...........................TETSKPTLRRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWELGQKSYQESYLAGMRQ------LSSLPLFSKLFRDELMNDELLHGLCKRLFGPESGDYWLTTSSVLETEPGYGQELHREHRQSPESMLNFLTALTD---TAENGATRVLPPPKADTAIPAVMNPGDAVLF--TGKTLHG-NTTDFLRRGFPLIM.............. 229
32 -19.4005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  9  2..................GSSSSGLVPRGSHMPPIRRVNASQGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKA--TIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNLPFAHEVLEKVFKKDSGDYWLNMGNILNMLPGAEAQPHRDDATSPDLMINITFPLN-EFRHDNGGTLLL-FYANAEDLPAAEMQVGDALIF--TGKCVHGGGASDKPRIGLALAA.............. 238
33 -19.2005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  9  1..................MARSADQETEPGVPADLPAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEESVRWGSGAGTVMDYVADAQLG--SDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENKE-----KDASVPTAPHHDAFSTAGTALTAWVALVD---PVERGCMTFVPGEIWMPRVTVPLRAGDCTFH--HARTVHSAGATDEPRLSTSAVYMDATAAYRPTGIAF 250
34 -19.2004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  12  1..SEMQDLYPSRQRADAEMRPRLDPVVHSEWTNDAP------ISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLAD----PAALDADTIVTEPQSNEIRSIFEIHAQSPVMARLAA--ARLADVARFLLGD-EVYIHQSRLNYKPGFKGREFYWHSDDGMPRMRALSMSVLLAE--NTPHNGPLMVIPGSHRHGIVAPTGKPGTVILF--DCNLMHGSNGTPFPRANAFLVYNAVSNRLEKPFGVE 279
35 -19.1004xab_A mol:protein length:252 EvdO2  ali model follow..  12  3...................................AMEVVGTIDHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDIAGQRDREGPPLLPQIIKPEKYVPELLDSPHFARCRSIASAFLDMEELEFYGHAILKPPRYGAPTPWHQDDPRWRRRGLSIWTTLDE--ATVESGCLHYLPGGDPTSAVACPLAPGGAVVH--DFRTPHYAGPTDQPRRAYVLVFMSAPAEVADPEPRP 247
36 -19.0003emr_A mol:protein length:310 EctD  ali model follow..  12  7..............SRQNNQPKILKRKDPVIYTDRSKDNQAPITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDS----IKDVASDKVIREPESNDIRSIFHVHQDDNYFQDVAND-KRILDIVRHLLGS-DVYVHQSRINYKPGFKGKEFDWHSDDGMPRMRAISVSIALSD--NYSFNGPLMLIPGSHNGGISVPTGKAGSVTLF--ESNTMHGSTSTPYPRNNLFMVYNSVKNRLVEPFSGG 280
37 -18.9002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model follow..  11  5........................SSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYPEILKYVECFTGP-NIMAMHTMLINKPPDSGKKTSRHPLHQRPSDLIVCAWTAMEH--ISRNNGCLVVLPGTHKKARVHLVMEKGDTVFF--HPLLIHGSGQTQGFRKAISCHFASADCHYIDVKGTS 266
38 -18.6003nnf_A mol:protein length:344 CurA  ali model follow..  10  3......................SGVDLGTENLYFQSNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQA-----KQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHN--ALFSVEPNHKGLPWHVGVGKTEDFGASIWIPLDK--TKEHRGGMQYVSIKDGYEEDEYNL--GDAFFF--NKYVLHQSVPLHKLRRAFVIRLVDYDTRVDEERLGL 280
39 -18.4002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  9  1.......................GSHMTNVTGDYTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMRELVALGAADPHATLEELTIDSFESVDEVAMHDYVKAFWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFGPNQDFRTFWIPLIR---TRESGGVALADGSEDEHLLHSPMEPGDILLF--HAHMCHKSIPNLSKRMSMDTRVQPAKSHRGFNAMTP 264
40 -17.9005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  12  5.........................................QLTADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQEVQGPHRILEEDGRTVRALYASHTRQSVFDQ---------LSRSDRLLGPATQLLEC-DLYIHQFKINTKRAFGGDSWAWHQDDGLPAPRAVNVGVFLSD--VTEFNGPVVFLSGSEKHPMVSPKAASGSVMLF--HPEIIHGSAPSPFARDLLIITYNDVANAPKPAGEPR 245
41 -17.8004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  11  22..GTTANLTQTHPNGPVCVNRGEEVANTTTLLDSGGGINKKSLLQNLLSKCDHDGSVELPNVLPKELVEEFTEKFESIQTGRKKDTGYSGDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLYPSTAFNSLKPSNDGHRIRKPHKDN---LDITPSSLFYFGN---QNTEGYLEL---TDKNCKVFVQP--GDVLFFKGN-EYKHVVANTSGWRIGLVYFAHKG........... 299
42 -17.6002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  13  1.......................................MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFETHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASEPLGRVLGVWIAVED--ATLENGCLWFIPGSDNSLFVPTPVQRGALVLI--HGEVVHKSKQSDRSRQAYTFHLMEASGTTWSPEN.. 276
43 -17.3005epa_A mol:protein length:279 SnoK  ali model follow..  13  2..........................ARSADPDPGGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEK---------EGREIWGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKRTLPTLVHDDETNELSATLTAWIALTD--VPVERGCMSYVPGSPWQPRVAVPVRAGDVVFH--HCRTVHMAEASDSVRMAHGVVYMDADATYRPGVQDG 247
44 -16.4002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  12  2..................................SHMSKKFALTAEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDLDAISGGTNIANYDRHLDDDFLAS------HICRPEICDRVESILGPNVLCWRT--EFFPKYPGDEGTDWHQAENEEFGGTITVWTAFTD--ANIANGCLQFIPGTDEASAVPMQMKAGQFIIF--WSTLMHHSGESQEMRMGFASRYVPSFVHVYPDSDHI 272
45 -16.2006EC3 Entity 1(prereleased)  ali follow..  9  247.........................................ARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISRFTEHGHVSDDYWNYDVENEAPVLYRIHNLEKQDWAERELLFRPELAELAAAFVGS-PVVPTAFALVLKEPKRAAGVPWHRDRA-APHTVCNLSICLDT--AGPENGCLEGVPGSDGGPRVPVPSKVGDVIVH--DVRLVHGSGPSDQWRRTIVIEFANPAISLPSLPS.. 465
46 -14.9003gja_A mol:protein length:319 CytC3  ali model follow..  10  2................................TTVSEQANFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGKANISNYDRHLDIDLLAE---------HIMRPEIVDRVGSLIGRNLLCWRS--EFFPKYQGDEGTDWHQAGRPAFIGTITVWTAFTH--STEQNGCLQLMPGTDESQAYPMVLKPGEAVIF--WSNTMHASLPHTGSRMGFAARYVPTQVQVYPGTENL 274
47 -14.6004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  6  1..............MSSGVDLGTENLYFQSMPERSDYEEQQLQKEEEARKVK--SGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD-HCIRPIKERRAVII--LRKTRLDAPR..... 243
48 -14.1004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  10  6...........................................SGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETE---------------KSRWSEASMAIMRRVQAAAFGPGQTLLS-SVHVLDLEARGYIKPHVDSIKFCGATIAGLSLLSP---------MRLVHTQEPGEWLELLLEPGSLYILRGSARY-HEILRDEESRISVI--CRSLPEGMGPGESG. 200
49 -13.3003thp_A mol:protein length:345 Alkylated DNA repair protein alkB homolog 8  ali model follow..  12  112......................................................GLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESF---LEKWLRKGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSL---------SLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRY-HGITCRKFDRTSFT................. 308
50 -12.7006fxk_A mol:protein length:718 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3  ali model follow..  13  543........................................................VYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVG-----YEDQWLQLLRTYVGPMTESLFPGYHTKARAVMNFVRPDEQPSLRPHHDS-----STFTLNVALNHKGLDYEGGGCRF----LRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWTRYIMVSFVDPAA.......... 717
51 -12.3004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  8  1...............................DESEYEERRDAEARRVKSGI------KQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFSAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAAD-HCIRPIKERRAVII--LRKTRADAPRLDSNS 227
52 -12.2004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  8  17........................................................IRQMRLFSQDECAKIEARIDEVVSRAEKGLGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV------SAVINDYQPGGCIVSHVDPIHIFERPIVSV--FFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD-HCIRPIKERRAVII--LRKTRLDAPR..... 219
53 -12.2002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  12  1...............................................MQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPD--ACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLYHGIQPLKAGRYNLT................. 198
54 -12.0003pl0_A mol:protein length:254 Uncharacterized protein  ali model follow..  13  12...........................................RATALQRLRAQGFCVLTP-MPLDAFDMMLPYWEELAPDLHLKDGGHYRYRRHGCFMQTWFEPLSNEMIHLPSWSALLVALGELFAKLRAPQGGRWYIEAHPFRIDTEGGVGR---AHRD-----GVDFVAVVFIGRQ----RGGETRVFDAAGPQGVRFTLEQPWTVLLL-DDQQVIHESTPLLPLRDTLVLTYRSGGFQAPA..... 254
55 -12.0003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  12  21......................................................GAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDA--CLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLYHGIQPLKAGRYNLT................. 211
56 -11.7001w28_A mol:protein length:331 DEACETOXYCEPHALOSPORIN C SYNTHASE  ali model follow..  16  1MGSSSSGLVPRGSHMDTTVPTF-----------SLAELQQGLHQDEFRRCLRDKGLFYLTD-LTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQIERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDCEPLLRFRYFPQPHYDLSMVTLIQ------QTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAKAPRHHVAAAGSSRTSSVFFLRPNAD......... 284
57 -11.5004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  12  1................................................QEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAG--YPDFQPDACLINRYAPGAKLCLHQDKIHPDLRAPIVSVSLGLP------AIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLYHGIQPLKAGRYNLT................. 197
58 -11.0003on7_A mol:protein length:280 Oxidoreductase, iron/ascorbate family  ali model follow..  10  10......................................RAADSAKRFVESLRETGFGVLSN-IDKELVERIYTEWQAFFNSEAKNEFMFNRETHDGFFPASISETAKGHTVKDIKEYYHVYPWGRIPDSLRANILAYYEKANTLASELLEWKAKFSIPLPEMIANSHKTLLRILHYITVLPTANEPG-LQVKAKDGS---LDVPSDFGNIIINIGDPSTSHRVIDKTKSRISLPLFLHPHPS......... 257
59 -10.4005xeg_A mol:protein length:231 Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed  ali model follow..  13  6...............................................LQYLRP-GMVLLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSSIPEVFSKIVKDAIQASNEFLRQKARPANDVECLVNFYTSSGKLGLHQDKDETKPSL-LPVVSFS--------GDTAEFDVNDVDKASKVDLESGDVLIFGKSRLIFHGVSRIRPGRLNLT................. 227
60 -10.2003oox_A mol:protein length:312 putative 2OG-Fe(II) oxygenase family protein  ali model follow..  12  3.......................STSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSD-LDQARIDAAVDSAKAFFALPVETKKQYGVETAKGADHYDL-VWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINLGAEEGG-LEVLDRDGQ---LPINPPPGCLVINIGDPSTVHRVVRRGVPRYSTPFFLHFASD......... 274
61 -10.1005gj9_A mol:protein length:303 1-aminocyclopropane-1-carboxylate oxidase 2  ali model follow..  11  13................................SKLNGEERDQTMALINEACENWGFFIVNHGLPHDLMDKIEKDHYKTCQEQKFNDMLKSKGLDNLETEVEDVDWEST-DEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSRAHTDAGGIILLF------QDDKVSGLQLLKDGD----IDVPPLNHSIVINLGDKSVLHRVVTQEGNRMSVASFYNPGSDAEISP.... 264
62 -9.8504xae_A mol:protein length:373 Feruloyl CoA ortho-hydroxylase 1  ali model follow..  11  36LSETGIKALPEQYIQPLEERLINKFVNETDEA-DMSNPDEDRVAEAVCDAAEKWGFFVINHGVPLEVLDDVKAATHKFFNLPVEEKRKFTKENSLSTTVREAEAEQFWPDICRNETLEYINKSKKMVRRLLEYLGKNLNVKELDETKESLFMGSIRVNLNY-GRHSDVSSLTILL------QDQIGG-LHVRSLASGN--VHVPPVAGSFVINIGDKSVEHRVLAGYNNRISVPIFVNPKPESVIGP.... 326
63 -9.6301w9y_A mol:protein length:319 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 1  ali model follow..  10  10................................DKVNGVERAATMEMIKDACENWGFFLVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWEST-REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSRAHTDAGGIILLF------QDDKVSGLQLLKDGQ----IDVPPMRHSIVVNLGDKSVMHRVIAKDGARMSLASFYNPGSDAVIYP.... 261
64 -9.6105lun_A mol:protein length:352 2-oxoglutarate-dependent ethylene/succinate-forming enzyme  ali model follow..  12  19.....................................AADISLGRALIQAWQKDGIFQIKT-EQDRKTQEAMAASKQFCKSDLTYSGYVASGEEVTAGKPDFPEIFT-NNTYQKSMKTFMEELGLAGERLLKLTALGFELPINTFTDLTRDGWHHMRVLRFPPQTSTLSRLVIAA------QDDVGG-LYIRPPVEGEK-TFVTPTPGVWTVFPGDLSTPHKVKLNTRERFACAYFH.............. 286
65 -9.5301gp4_A mol:protein length:356 ANTHOCYANIDIN SYNTHASE  ali model follow..  13  61.....................................KIRENCIEELKKASLDWGVMLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINEAHTDVSALTFIL------HNMVPG-LQLFYEGK----VTAKCVPDSIVMHIGDKSILHRGLVKEKVRISWAVFCEPPKDKI....... 312
66 -9.5005lsq_A mol:protein length:359 Ethylene Forming Enzyme  ali model follow..  12  20.....................................AADISLGRALIQAWQKDGIFQIKT-EQDRKTQEAMAASKQFCKSDLTYSGYVASGEEVTAGKPDFPEIFT-NNTYQKSMKTFMEELGLAGERLLKLTALGFELPINTFTDLTRDGWHHMRVLRFPPQTSTLSRLVIAA------QDDVGG-LYIRPPVEGEK-TFVTPTPGVWTVFPGDLSTPHKVKLNTRERFACAYFH.............. 287
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.