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Query: 4njg_A mol:protein length:230 7-carboxy-7-deazaguanine synthase, from PDB1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMTYAVKEIFYTLQGEGANAGRPAVFCRFAGCNLWSGREEDRAQAVCRFCDTDFVGTDGENGGKFKDADALVATIAGLWPAGEAHRFVVCTGGEPMLQLDQPLVDALHAAGFGIAIETNGSLPVLESIDWICVSPKADAPLVVTKGNELKVVIPQDNQRLADYAKLDFEYFLVQPMDGPSRDLNTKLAIDWCKRHPQWRLSMQTHKYLNIPLast
1 -21.800PF13394.6; B8DWG8_BIFA0/78-188; 4Fe-4S single cluster domain  ali follow..  13  2.........................................VSGCPFHCVECYNSSIWD-------------FQAGHEYNDKLEAQIMDDLAQ--SFVQGITFLGGEPLLNTGLPLARKIRERFGHTKDIWCWT.......................................................................................... 81
2 -21.600PF13353.6; D1BLW3_VEIPT/12-149; 4Fe-4S single cluster domain  ali follow..  17  1.........................ANGEGIR-----TSIFVTGCTHCCYNCFNEEYQD-------------FNAGKVWTQAETDLVVSYVKN--PTCSGLTLLGGEPFQNVQLPVVRAVRAAWAYSGYEIDDILEDELRSALLQIDILVDGRFVDELKDPALRFRGSSNQRII.................................................. 138
3 -9.230PF04055.21; CDKAL_HUMAN/208-381; Radical SAM superfamily  ali follow..  10  5..........................................TGCLNACTYCKTKHA---------------RGNLASYPIDELVDRAKQSFQ--EGVCEIWLTSGRDIGTNLPTLLWKLVE-----------VIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASD---VLMEMKREYCVADFKRVVDFLKEKVPGITIATDI--ICGFP 160
4 -6.910PF01446.17; A0A0C1NIB9_9CYAN/69-306; Replication protein  ali follow..  7  1...................................KVKLLHTRFCRVRCPVCQWRRA--------------------LMWKAKAYKILPQVVADYPKYRWLFIT-IWELRTTLDGINKAFKRKGWVKSVEVT............................................................................................ 94
5 -6.790PF14996.6; F6QAP7_MONDO/57-202; Retinal Maintenance  ali follow..  13  25.SSNNTSVRTSIQMLGKRCSPVY--LGGSSAPCGIGTNTSQSRTCDLRCTACD........................................................................................................................................................................... 75
6 -6.490PF03283.13; K4D0N0_SOLLC/15-369; Pectinacetylesterase  ali follow..  11  1FVTTEGLLVNITILESAVAKGAVCL-DGRGSGSGVNSWVISLEGCVTSCRYCDG--GSFTGDVEAIDPATRLHYRGARIFKAIMEELLAQ---GMKKSQNAILSGGLATILHCDNFRMLLPNNVKVKCFSDAG........................................................................................... 186
7 -6.400PF03331.13; D5CP16_SIDLE/4-276; UDP-3-O-acyl N-acetylglycosamine deacetylase  ali follow..  12  9........................QATGVGLHTGEKVYLT--SGIVFRRVDLPDSKDIRAEAHAVHDTRLSTCLEAHGARVATVEHLMSALAGLGVDNAIIELTSSEPIMDSAGTFIFLLQSAGIVVEVKDGDKWVRFEPYNGYKLNFTINFAHPVFANTKQDVTVDLGEQSYIKEVSRARTFGFMQEVEYGSLDNAIVMDEYRVINPDGLRFEDEFHKVLDA. 239
8 -6.390PF03033.20; U80A2_ARATH/195-339; Glycosyltransferase family 28 N-terminal domain  ali follow..  12  3....................................................................................................MLIVGTRGDVQPFVAIAKRLQDYGHRVRLATHANFKLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKDIIYSLLPACKEPDPDSGISFKADAIIANPPAYGHTHVAEALKIP 129
9 -5.860PF14107.6; G0L9C5_ZOBGA/11-120; Domain of unknown function (DUF4280 topsan)  ali follow..  14  2.........................................CKGAICNCTMAPGVPSLPMEVITQQKYYINDDQGTQKLIATDLEKTVA-NLEWSGFYENIELPNGGKPLLDTSTAQ--CSAGGGTITIFNHG........................................................................................... 109
10 -5.770PF09086.11; D5CQL7_SIDLE/44-135; Domain of unknown function (DUF1924 topsan)  ali follow..  13  2........................SFRGFSAERGE-RFFKQTHGNELSCASCHTENPAASKHTKTGKIIQALAPAANAERFTDPAKVEKWFKRNCHDVLVRACTPQE..................................................................................................................... 84
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 7 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.