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Query: 4wce_R mol:protein length:105 50S ribosomal protein L24, from PDB1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MHIKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIKSNNLast
1 -36.300PF17136.4; B0VI20_CLOAI/43-106; Ribosomal proteins 50S L24/mitochondrial 39S L24  ali follow..  46  1.....................................VHMIKKHAKPTQQNPQGGIITMEAPIDASNVMLFNEKLNAVSKPVYQVREGRRIRVCKKSGDEL.... 64
2 -18.300PF16906.5; U5D8M2_AMBTC/8-121; Ribosomal proteins L26 eukaryotic, L24P archaeal  ali follow..  26  40VPVRKDDEVQVVRGTFKGREGKIVLVYRIKWVIHIERITREKVNGS-----------TVNVGIHPSKVMVTKLKLDKDRK......................... 108
3 -17.400PF00467.29; RL24_STRCO/5-36; KOW motif  ali follow..  71  1....KGDLVQVITGKDKGKQGKVIAAFPREDRVLVE..................................................................... 32
4 -6.840PF14505.6; Q3AU32_CHLCH/27-287; Domain of unknown function (DUF4438 topsan)  ali follow..  15  64.....GNSATVATGDAKGAEGTVIGHHGGSEHVIVDFPRDVKEKLLYSDTLIIRGVGQGLRLLEYPDIALFNLSPRLLHAMKVREMGNGMLEV............ 151
5 -6.730PF18346.1; A0A0K9NVF3_ZOSMR/896-1014; Mind bomb SH3 repeat domain  ali follow..  18  61.PLNRGQHVQLKSGQSRDSIGTVLCVDDDGILRV....................................................................... 103
6 -6.660PF02887.16; D5C1C2_NITHN/363-477; Pyruvate kinase, alpha/beta domain  ali follow..  29  89..VRDGDWVIITKGDLTGVQGGTNAL............................................................................... 112
7 -6.260PF12673.7; R6F1A1_9FIRM/62-150; Domain of unknown function (DUF3794 topsan)  ali follow..  8  3......REILMIDGKSHLAVKEIDAVVKGDDYINLSGEIELQTLYLPEKQEGNLPVISVQTRVPFKDQWHTSMSAGATMVLDCSVEK.................. 83
8 -6.190PF18334.1; A0A084FXZ5_9PEZI/916-1001; Exoribonuclease Xrn1 D2/D3 domain  ali follow..  8  6..FPVNTQAFFLGDFNYGRPLIVSGHSNNKAEIRLS..................................................................... 39
9 -5.660PF03483.17; B9M519_GEODF/213-386; B3/4 domain  ali follow..  13  69.QAAEGEKFDTLDGQVRTLQSSDLTICDGDRAVALAGI------KNSEIADDTTDILIESAYFNPSAIRRTSKRLGLHTESSHRFERG................. 152
10 -5.660PF04452.14; RSME_ECOLI/20-237; RNA methyltransferase  ali follow..  13  13LRMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHRGEKMEFTIQKSIELGVSLITPLFSERCDSERLNKKLQQWQKIAACEQCGR...... 125
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.