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Query: 5lzs_l mol:protein length:51 Uncharacterized protein, from PDB1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50
# Score Template Links and tools%idFirst MSSHKTFRIKRFLAKKQKQNRPIPQWIWMKTGNKIRYNSKRRHWRRTKLGLLast
1 -33.200PF00832.20; E5S598_TRISP/142-183; Ribosomal L39 protein  ali follow..  69  1........IKRKLAKAQRVNKPVPQWFRLRTGNRIRYNVKRRHWRRTKLK. 42
2 -6.780PF14117.6; D0J295_COMT2/9-67; Domain of unknown function (DUF4287 topsan)  ali follow..  8  10...............EKAYGKPVTHWLKILDELRDKKHMEQVAHLKLEHGI 45
3 -6.720PF00424.18; REV_HV2BE/1-91; REV protein (anti-repression trans-activator protein)  ali follow..  28  5.ADEEGLQGKLRLLRLLHQTNPYPQ-----PGTASQRRNRRRRRRRQWLRL 50
4 -6.580PF16322.5; G3WUT0_SARHA/29-239; Tubby N-terminal  ali follow..  23  1.......RQRALLEQKQKKKRQEPLMVQSNPDSRARTRRTRQSEEQAPL.. 42
5 -6.110PF04428.14; A7F968_SCLS1/226-304; Choline kinase N terminus  ali follow..  21  38............LSNSKRAEKERKAWIQFKNE-RLAHTLRLKGWRRVPLD. 76
6 -5.640PF16881.5; LIPA_SCHJY/7-112; N-terminal domain of lipoyl synthase of Radical_SAM family  ali follow..  14  58.........ENVVLPNGSVHKRLPSWLKTKVPLGTNFNKIKNDLRGLNLH. 98
7 -5.610PF14475.6; C4R4U2_KOMPG/35-74; Sec1-binding region of Mso1  ali follow..  19  15.KETDTLVHKALVNYYITRDLPFPDWL........................ 40
8 -5.420PF14715.6; Q21X44_RHOFT/40-88; N-terminal domain of cytochrome oxidase-cbb3, FixP  ali follow..  21  14................REMNNPLPRWWAWLFVITIVFSF............ 36
9 -5.370PF06621.12; W5K1F0_ASTMX/351-643; Single-minded protein C-terminus  ali follow..  15  9..SRKGNKSRTSRTKPKTRLSPYSHYPGFHTE-RSESDQDSSPWGGSPL.. 54
10 -5.190PF06910.11; G3PF21_GASAC/45-162; Male enhanced antigen 1 (MEA1)  ali follow..  14  70MDADHVELVKRTMAAIALPSLAVPSWANEISDDQWKDMVQNT......... 111
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;