current user: public
If you have questions about the server, please let us know.

Query: 4ufq_A mol:protein length:217 Hyaluronidase, from PDB1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .
# Score Template Links and tools%idFirst AGENGATTTFDGPVAAERFSADTTLEAAFLKTTSETNHAATIYQAGTSGDGAALNVISDNPGTSAMYLSGTETARGTLKITHRGYADGSDKDAAALSLDLRVAGTAAQGIYVTATNGPTKGNLIALRNNTGLDDFVVKGTGRIGVGIDRAATPRAQVHIVQRGDALAALLVEGSVRIGNAATVPTSVDSSGGGALYASGGALLWRGSNGTVTTIAPALast
1 -7.700d5o9zg_ a.118.8.1 (G:) Pre-mRNA splicing factor 6 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  40  6.........................................................................................................................................................................................MPAPLG----YVPGG----RGATGFTTRIGPA 32
2 -6.750d3c9fa1 d.114.1.1 (A:338-560) 5`-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain {Yeast (Candida albicans) [TaxId: 5476]}  ali model 3D-neighbors follow..  10  28................................................................................................................................................................................LALKILKTLPKSKHEERITIINTGSIRYDLYKGPYTIVSP. 72
3 -6.750d2c3fa1 b.108.1.5 (A:7-336) Phage-associated hyaluronidase, HylP1 {Streptococcus pyogenes [TaxId: 1314]}  ali model 3D-neighbors follow..  32  144....SDNDTSDGPLMSLRTGKETFNQSALFVDYKGTTNAVNIRQPTTPNFSSALNITSGNENGSAMQLRGSEKALGTLKITHENPSIGADYDKNAAALSINGAGTAAQGIYINSTSG-TTGKLLRIRNL-SDDKFYVKSDGGFYAKETSQIDG-------------------------NLKLKDPTANDHAATKAYVDKSELK.............. 325
4 -6.590d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  14  6.......................................................................................................................................................................................QLAHQLKDKRILLIGGGEVGLTPTGCKLTLVSPD 45
5 -6.460d4j25a1 b.82.2.0 (A:2-206) automated matches {Pseudomonas putida [TaxId: 160488]}  ali model 3D-neighbors follow..  17  115..........................................................................................................................................................................PPGAFYRRHLDRFRDDDRRMVSAVLYLNGGQLRMFLADGVEHDVEPV 168
6 -5.770d3riqa_ b.80.1.0 (A:) automated matches {Siphovirus 9na}  ali model 3D-neighbors follow..  9  412..................................................TKKILCTYVADIQGGNINVQHGENAMTLSMRPAMGGTINPSLVLTADCQVASPGNEASIVKLSAIQDGARVGELQLNRLGF---------------------------------------KHMSIPVAESQLPESALEFNSSGFFFGTDDELRAKKPDGTFVTYS.. 540
7 -5.660d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  1......................................................................................................................................................................................APSHVP-IGGGTAAFAARSIRARDPGARVLIVSE. 37
8 -5.620d1n6za_ d.263.1.1 (A:) Hypothetical protein Yml108w {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  12  64.................................................................................................................................................................................................ICIPNEGHIKYESSDGLIVLMLDK 88
9 -5.450d2f09a1 b.61.8.1 (A:1-82) Hypothetical protein YdhA {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  20  22.........................................................................................................................................................................PRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWKGDEATVY..... 65
10 -5.360d1ofda1 b.80.4.1 (A:1240-1507) Alpha subunit of glutamate synthase, C-terminal domain {Synechocystis sp. [TaxId: 1143]}  ali model 3D-neighbors follow..  18  61................................................................................................NITLNFQGAAGQSFGAFNLDGMT----LHLQGEANDYVGKGMNGGEIVIVPHPQASFAPEDNVIIG-NTCLYGATGGNLYANGRAGERFAVRNSVGKAVYMTGGVIVVLGPVGR....... 179
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.