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Query: 5t5h_Z mol:protein length:113 60S ribosomal protein L26, from PDB1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSRRKARRAHFQAPSHVRRILMSAPLSKELRAKYNVRAMPVRKDDEVRVKRGAYKGREGKVTACYRLRWVIHIDKVNREKANGTTVPVGVHPSNVEITKLKLNHNRKAILERKLast
1 -53.700d1vq8t1 b.34.5.1 (T:1-119) Ribosomal proteins L24 (L24p) {Haloarcula marismortui [TaxId: 2238]}  ali model 3D-neighbors follow..  35  2KQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKR...... 108
2 -18.000d2j01y1 b.34.5.1 (Y:2-102) Ribosomal proteins L24 (L24p) {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  28  3.....................................KMHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVREKEAPLHASKVRPICPACGKPTR...... 83
3 -10.700d2do3a1 b.34.5.5 (A:462-523) Transcription elongation factor SPT5 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  23  4..........................AQELRKYF-------KMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHE.................................. 49
4 -10.600d1nppa2 b.34.5.4 (A:191-248) N-utilization substance G protein NusG, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}  ali model 3D-neighbors follow..  22  2.....................................KVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTV----MISIFGRMTPVELDFDQV.................. 55
5 -9.080d5lxva_ b.2.2.0 (A:) automated matches {Ruminococcus flavefaciens [TaxId: 641112]}  ali model 3D-neighbors follow..  14  1............................................ETVQISASNAEAKAGDQFEVK-----VSLADVPSTGIQGIDFAVTYDNTVVTIDKITVGE......... 55
6 -8.520d3ul4a_ b.2.2.0 (A:) automated matches {Clostridium thermocellum [TaxId: 203119]}  ali model 3D-neighbors follow..  12  1............................................NTIEIIIGNVKARPGDRIEVP-----VSLKNVPDKGIVSSDFVIEYDSKLFKVIELKAGD......... 55
7 -7.960d4dh2a1 b.2.2.0 (A:7-162) automated matches {Clostridium thermocellum [TaxId: 203119]}  ali model 3D-neighbors follow..  11  2.....................................HEAETADYILDVLVEGVKAKAGDTVEIP-----LKFENVPSHGIQSFNLSLYYDSKAIEVLKVEPGS......... 63
8 -7.820d4uypa1 b.2.2.0 (A:2-143) automated matches {Acetivibrio cellulolyticus [TaxId: 35830]}  ali model 3D-neighbors follow..  16  1..............................................LQVDIGSTSGKAGSVVSVP-----ITFTNVPKSGIYALSFRTNFDPQKVTVASIDAGS......... 53
9 -7.740d1aoha_ b.2.2.2 (A:) Cohesin domain {Clostridium thermocellum, cellulosome, various modules [TaxId: 1515]}  ali model 3D-neighbors follow..  12  1.............................................AVRIKVDTVNAKPGDTVRIP-----VRFSGIPSKGIANCDFVYSYDPNVLEIIEIEPGE......... 54
10 -7.420d4umsa1 b.2.2.0 (A:1039-1186) automated matches {Bacteroides cellulosolvens [TaxId: 35825]}  ali model 3D-neighbors follow..  12  3.............................................WMNVVIGKMNAEVGGEVVVP-----IEFNNVPSFGINNCDFKLVYDATALELKNVEAGD......... 56

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.