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Query: 4o4a_A mol:protein length:170 Lipoprotein, putative, from PDB1018

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSGVDLGTENLYFQSNAKETTDTIYLIPEEYEGDLIVVYNVPGAELLPKEEEFSVVTFAADGTAVTSTKNMKFGTVNDLYYTVNKEGQRTKIDSSCIHFSSTGSRTENSWEFPFANLEVTRTACSQEFSANGREVPENQEHPAEKKMRDLMQRIQERYMNKVKLast
1 -6.850[T] COG3103 SH3 domain protein  ali follow..  10  1MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRXVGTVNAGEEVTLLQTD-----ANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQR 167
2 -6.530[S] COG4991 Uncharacterized protein with a bacterial SH3 domain homologue  ali follow..  8  1MKLSARASIFTLALLVSTNAYASSAIVLRTGPGTQYGTIGAIPNGVGIMVTRGYGWCQVSYGG---------MTGWAASRYIAIQTGNGYTTNDNFGSTAAAVGI........................................................... 104
3 -6.490[S] COG3111 Uncharacterized conserved protein  ali follow..  15  1MKKFAAVIAVMALCSAPVMAAEQGGFSGPSGFQGPNGSVTTVESAKSLRDDTWVTL-----RGNIVERIS-------DDLYVFKDASGT........................................................................... 84
4 -6.310[R] COG3895 Predicted periplasmic protein  ali follow..  8  9WGRPAKVVLVALILGGLGLAIPSYA-----------TQTYYCSPTETLTIKSAIQVTLPDGRTVVLPQAESASGNKYSNGFITVWSKGNTALVEEG.................................................................... 99
5 -6.210[U] KOG3342 Signal peptidase I  ali follow..  11  31FAMIVSSALMIWKGLMVVTGSESPIVVVPAFHRGDLLFLTNYKEEP---RVGEIVVFKVEGRDIPIVHRVIKLHEKEDGSVKFLTK-GDNNNVDDRGLYAPNQLWLTKKD...................................................... 143
6 -6.200[R] COG4574 Serine protease inhibitor ecotin  ali follow..  14  1MKTILPAVLFAAFATTSAVQPLEKIAPYPQAEKGMKRQVIQL---TPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKYYVFDKVSS........................................................................... 99
7 -6.060[M] COG3040 Bacterial lipocalin  ali follow..  12  1MRLLPVVAAVTAAFLVVACSSPTPPKGVTKRYLGTWYEIARLDHRFERGLEQVTATYSLRDDGGINVINK.............................................................................................. 77
8 -5.950[O] KOG1641 Mitochondrial chaperonin  ali follow..  10  59..........VLVRLEDLPIKSSGGVLLPKAAVG--RVLFSDVSAYEVDLGTDARHCFCKESDLLAL................................................................................................. 137
9 -5.780[S] COG4704 Uncharacterized protein conserved in bacteria  ali follow..  11  7VSLILLTTLGNLAWSWSARANFNGKLTVEKNKQGQVCVIFTSSQGFPGDRKRVFDRQCTQNETPLKLTFNNLKAGTYAVAAIQDLNGDGTLNMPVEPFGFSRNPEVRTSAPKFGDAAFILAGRNTTIQVQMK................................ 149
10 -5.750[S] COG4808 Uncharacterized protein conserved in bacteria  ali follow..  10  12FSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYK---GDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDM---------------EKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK 157
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.