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Query: 5t5h_Z mol:protein length:113 60S ribosomal protein L26, from PDB1018

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSRRKARRAHFQAPSHVRRILMSAPLSKELRAKYNVRAMPVRKDDEVRVKRGAYKGREGKVTACYRLRWVIHIDKVNREKANGTTVPVGVHPSNVEITKLKLNHNRKAILERKLast
1 -67.900[J] KOG3401 60S ribosomal protein L26  ali follow..  65  9SSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILERR 122
2 -18.200[J] COG0198 Ribosomal protein L24  ali follow..  25  4........................................IRRDDEVIVIAGKDKGKRGKVLKVLADDRLVVGGVNLIKRHTKPEKEAPLHVSNVAIFNTETSKADR...... 81
3 -9.160[K] COG0250 Transcription antiterminator  ali follow..  20  120.....................................SVSFEIGEQVRVSDGPFASFNGTVQDVDEERSRLKVE-----SIFGRATPVELEYGQV.................. 173
4 -7.810[R] KOG4315 G-patch nucleic acid binding protein  ali follow..  16  298......................TQELVQGIDQEL-LETALPRRGGSVLVLSGRHKGVYGRLVEKDLDKETGVVC------------------DSQEMLHVKLDQ......... 362
5 -6.560[T] COG2203 FOG: GAF domain  ali follow..  18  26.........................VTNRDEEESYLELAASYGAESKAAIKQRLDLREGLVGQSAADKRAIMLDDVPPDFLRITSGLGGASPANVIILPALFEDEVKAVIE.. 111
6 -6.450[J] COG0361 Translation initiation factor 1 (IF-1)  ali follow..  21  36.............................VSGKIRMNYIRILPGDKVTVEMSPYDLTRGRIT................................................... 68
7 -6.050[K] COG5164 Transcription elongation factor  ali follow..  21  359.................QKLLIPVQELPLLLKPNKSDDVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPR................................... 419
8 -5.880[OT] KOG2561 Adaptor protein NUB1, contains UBA domain  ali follow..  7  131...................KCISG--GRIINGQKTLASQGLKTNQHLMVVVGGTNEGQELHERIQRIRADLELRFMEMEDQDGRPIFLPREENRSLLMAMSMYEVARVAMHKE 227
9 -5.880[T] KOG4792 Crk family adapters  ali follow..  14  249...............................NAYDKTALALEVGELVKVTEGGCNGKRGHF----------HVRLLDQQNPDEDF............................ 303
10 -5.570[S] COG5591 Uncharacterized conserved protein  ali follow..  12  20.................................................LVQLSNEFTWKISEMEIDDGCYELHVTD---ENGNVLKVKVDPETMKVVAGKVKRYGDG..... 75
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Bourne PE, Allerston CK, Krebs W, Li W, Shindyalov IN, Godzik A.,Friedberg I, Liu T, Wild D, Hwang S, Ghahramani Z, Chen L, Westbrook J. The status of structural genomics defined through the analysis of current targets and structures. Pac Symp Biocomput. 2004;:375-86.