FFAS03 results for PF00817

Query: PF00817.20; Q74KV6_LACJO/16-168; impB/mucB/samB family, from PfamA32U

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150`
#	Score	Template	Links and tools	%id	First	`IDMDAFYASVEMRDNPSIRNKAVLIGGDPKKNKGHGVVATANYIARSYGAHSAMPTAKAVRLIPAEKLVIIQPNFEKYRAVSAEIHQLMHKITDRVESVALDEAYLDVTENKLNLTDPVRIAALLQERIYQRIGLTSSFGVSYNKFLAKMGSE`	Last
1	-77.200	`[L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair`	`ali follow..`	43	7	`VDMDCFFAAVEMRDNPALRDIPIAIGGSR---ERRGVISTANYPARKFGVRSAMPTGMALKLCP--HLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASD`	154
2	-61.600	`[L] KOG2094 Predicted DNA damage inducible protein`	`ali follow..`	26	88	`IDMDAYFAAVEMRDNPALRTVPMAVGS-------SAMLSTSNYLARRFGVRAGMPGFISNKLCPSSNTEKKTFKRHRFGGDCPCWLPRFDENENTLEDLKIEESICPKCEKSRFGTGREEAVREIRFRVEQLTGLTCSAGIASNFMLAKICSD`	287
3	-57.700	`[L] KOG2093 Translesion DNA polymerase - REV1 deoxycytidyl transferase`	`ali follow..`	26	324	`AELELFAQRFEHHFHDGDKAEKVRSGFD--KKMSLSEIASCSYEAREKGIRNGMFVGQALKLCP--ELKTIPYDFEGYKEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLHELNVDVMAFVSHLRQEVYSKTGCPCSAGVAGNKLLARMATK`	473
4	-50.900	`[L] KOG2095 DNA polymerase iota/DNA damage inducible protein`	`ali follow..`	28	21	`VDMDCFFCQVEEKQHPEYRNRPLAVVQ--YNPWRGGGIIAVNYAARAKGVTRHMRGDEAKDLCPEIVLCQVPADTSKYRDAGKEVANVLQRFTQLLERASVDEAYLDITETVNRLLIGASVAGEVRAAVKKETGYECSAGIAHNKILAKLAAG`	243
5	-7.000	`[L] COG3285 Predicted eukaryotic-type DNA primase`	`ali follow..`	13	24	`.DLARYYEAVGPWLIEHIRGRPCSIIRAPDG------FGGEQFFQRHAMPGTSNLLELVEVFGDKKPYLQIDRVEGLAAVAQIGALELHPWNCEPQQPEVPGRLVFDLDPGPDVPFKTVVEAAKEMRARLDDLGLVSFCKTTGGKGL......`	163
6	-6.530	`[C] COG3411 Ferredoxin`	`ali follow..`	9	211	`..............................SRKWQPTFDALKSAVENAGLDIEVRTSGCLEVCQLGPVVFYSNDRTWYTRVNNVAENIVNEHGNKITENLYPPQTL...............................................`	290
7	-6.320	`[Q] COG3917 2-hydroxychromene-2-carboxylate isomerase`	`ali follow..`	12	23	`......LPRIAAAHGASIAWRPMLLGGVFKATGNHSTLHDLARYAKRYGVPLAFNPAFPINTLTLMRGAQGYLGGEGFQPYLKAVFEALWVRQQNLGKPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTEEAVRRGV............`	167
8	-6.170	`[S] COG1478 Uncharacterized conserved protein`	`ali follow..`	15	23	`.DIVQALEASLQDAGISPVDGDVFV--------AESAVATA--ENRIVELASIKPGEKALSLGIDPREMELVLQECDELFGGVPGAALTITKGILSPNAGIDASNAPDGHVVLLPEDPRKSSETIRKRLEQRYSCKLGVIIGDS.........`	160
9	-6.150	`[S] COG1978 Uncharacterized protein conserved in bacteria`	`ali follow..`	12	1	`MPKFRDIEEVKEFIKTTDKETSIYVGCDSRQLRDKTIFVTV-HISSKYGAKVFWNVEKVPKINSLRQRLMEEVNRA---------VYHALMLMDAVDGRHF-EVHLDINPDEN----------ASSVIVKEAVGYVLAQGLKPDAIAASCAAD`	140
10	-5.970	`[S] COG2429 Uncharacterized conserved protein`	`ali follow..`	12	159	`..............................................................................NRVQHFLMKKLIKEGALLFFIGGDNFMSPCNGLE--PQGLLRIINEIDDEI--NVALKAGIGKAPTAEKAANLAD`	229

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster