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Query: PF03992.16; HMOB_BACSU/65-140; Antibiotic biosynthesis monooxygenase, from PfamA32U

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst GFAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFEAIRVLRPLDSDTYVILTLWETESAFQDWQQSGSYKEAHKKLast
1 -31.300[S] COG1359 Uncharacterized conserved protein  ali follow..  22  2.LIQMVSINVKQGHAADFLEAFRINYEGTRQEPGNLRFDVLRNPDDHSFVIYEVFKSPEALDAHRKTEHYQECVRR 77
2 -29.100[R] COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides  ali follow..  8  2.IYEIAMLPVQKDKISEFRQAFGDVVPLLKRARGYRGHVLAQGVEPEVFNLIVRWRSLNDTPGFEASEDHEQFMEG 78
3 -26.900[S] COG3224 Uncharacterized protein conserved in bacteria  ali follow..  14  14YFEYHFAHRVTPDHHEIFLECQEQLKILVTKYPGYISSESTELRSEGVAETVIRFDTLENFMGWIDSPERRQLIYL 92
4 -7.920[S] COG5470 Uncharacterized conserved protein  ali follow..  12  6...WIAQVDVRD--SERYKDYVSTAKPAFERFGA--SVTELEGTARARNVVIE-FPSVQHAIDCYNSPEYQAAAK. 79
5 -6.720[S] COG5507 Uncharacterized conserved protein  ali follow..  7  2AYVDGFLVAVPTANIEAYKKLASAAGAVWKEH-GALNYVVQAKDDETVVFSWIVYRSRQDRDAIVAK......... 85
6 -5.470[S] COG3832 Uncharacterized conserved protein  ali follow..  9  22............GRKPDQTEETTLTTKLDIAPANDRELVVARIIDAPRENVYRCWTDTRLLTQWFSPKPWTTPRAE 85
7 -4.590[R] COG2071 Predicted glutamine amidotransferases  ali follow..  11  165..HHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMI--EAVEGDNLPSWYLGVQWHPELMFQT............. 223
8 -4.310[S] KOG3319 Predicted membrane protein  ali follow..  20  72........................................FETPDQGKARLLTHWEQLDYGVQFTSSRKF...... 101
9 -4.270[S] COG3254 Uncharacterized conserved protein  ali follow..  4  4...MGMVLGLKPEKVEEYVRLHAAVWPDVLTACNIKNYSIYLRRPENLLFSYFEYHGAADMAKMAADPKTQEWWA. 81
10 -4.050[R] COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein  ali follow..  11  7.......YAVKEGRKTGIFKTWDECVQYVSGYPNAKYKGFVTREEAEVYL.......................... 49
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.