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Query: PF05283.11; F6ZX51_ORNAN/2-123; Multi-glycosylated core protein 24 (MGC-24), sialomucin, from PfamA32U

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ICTGQNCSACLGPSVGNSSCFWLECSGKSYCSDSPSVENCTAENKTEDCSAATTTRPSPTSSSVTTQTTPNATATPVTPSPRKSSFDAASFIGGIVLVLGVQAVVFFLYKFCKSKERNYHTLLast
1 -7.000[R] COG5643 Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E  ali follow..  10  832..........................NTGGNQGGSHGGSTGGVPSGSAFTGHAGYSPGVDTAASPAEVGAASSVSEEPASAPAKAYEVKNYVYGIVGVL--VAAGLVAFGFLRG........ 929
2 -6.980[S] COG2363 Uncharacterized small membrane protein  ali follow..  12  83.....................................................................................FSGSLYVGGVSFLVGWALLLIGAIRMKRKGAS..... 129
3 -6.740[IT] KOG1435 Sterol reductase/lamin B receptor  ali follow..  13  2....................................................AAKLQPNIPKAKSLDGVTNDRTASQGQWGRAWEVDWFSLASVIFLLLFAPFIVYYFIMACDQYSCAL... 68
4 -6.570[O] KOG4159 Predicted E3 ubiquitin ligase  ali follow..  11  12.CGHSFCKNCLERCLDHAPC----CKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEETAELSHLTKNVP------------FVCTMAYPTVPCPLHVF--------EPRYRLM 112
5 -6.490[W] KOG3848 Extracellular protein TEM7, contains PSI domain (tumor endothelial marker in humans)  ali follow..  21  330..QFNRCGPCVSSQIG-FNCSW--CSKLQRCSSGFVDSGCPEESKEKMCESRTTTTIGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTVGILILVLIVATAILVTVYMYHFIERRPSRWPAM 500
6 -6.450[DV] KOG4537 Zn-ribbon-containing protein implicated in mitosis  ali follow..  9  42....EYCPTCMEDRALVRRCV--TCELFREKSSVIVGEVSLQDEDLNEAVNNKIPTPAAPVNKPAKKAVLQKSAPAKKKEAVPAA..................................... 124
7 -6.230[S] COG4272 Predicted membrane protein  ali follow..  15  41.........................................................TLAQIASYHSQMNSKFIYLGLIPKGLLDLDGIFFI-GLLVFTPITSVVIALVSFYLTRNKLYIAL 108
8 -6.110[I] KOG3670 Phospholipase  ali follow..  10  331.........KPLLNRKAAKWLWYYCPS----------IGCPYIRTVQNFKKCTIMKESEWQSKIAHLKEQKTGKQTRQEVIRTNLAGVILVILGLSLLSVSIFGTYFYCHGMKATKGRFDYG 457
9 -6.090[S] KOG4823 Uncharacterized conserved protein  ali follow..  12  41................SSKCLWHACRALILGLTLMLLGAGMAT----------------ADHLSMGSELRGNVTVRVKNDLKGFHLNNFAYVGPIVMGFGGFIVVASCVMTFEARDSAAKVV 134
10 -6.070[S] COG1470 Predicted membrane protein  ali follow..  16  648...............................SQIPSLSPKGRERVTITVKVPEGTPAGDYRVQITVKADQAEWQDTLRVVVRQR--STSTYIGVLILIISFALVLFMMRRIGR......... 727
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.