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Query: PF05721.13; Q92PC6_RHIME/55-292; Phytanoyl-CoA dioxygenase (PhyH), from PfamA32U

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ARLAGDCATQDGRRSVLAEICEALATGPGVAVFKRAFTDTRVIDEASGIFNEIIEEQHRTNSGGGDHFAKPGANDRIWNSLEKHCLKNPENFAAYYGNAIIALVSEAWLGPNYQMTAQVNRVNPGGASQSPHRDYHLGFQTSAVIEQYPAHVHRLSPVLTLQGAVAHCDMPVESGPTLFLPYSQTYLPGYLALKRPEFRTYFEENHVQLPLEKGDVVFFNPALFHAAGSNRSAGIKRVLast
1 -69.300[Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin  ali follow..  14  1......MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGK---ERLARAGELGVLRLMMKY-----DPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPDVFQNAFHQDFPRVL---------------SGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKP-------DHTYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLA 210
2 -66.800[I] KOG3290 Peroxisomal phytanoyl-CoA hydroxylase  ali follow..  16  37ASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPGKKTSRHPLHQDLHY------------PFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRK. 276
3 -22.200[S] COG3826 Uncharacterized protein conserved in bacteria  ali follow..  11  10GAIDTSGTSGAPIDTFDWRAVEDALNDAGNALLPGLLTPGACDALAALYPRDSLYRSRVAMARHGFGRGEYKYFAYPTQLYPRLAPIANRWNQAMGIDVRYPAAHADFLRRCHDAGQLRPTPLGPGDYNCLHQDLY------------------GEHVFPLQVAILLSEPGADTGGEFVMT---------------EQRPRMQSRPDVVPLRKGDAAVFAVTMRHGVSR-LRSGQR.. 239
4 -17.100[S] COG3128 Uncharacterized iron-regulated protein  ali follow..  10  7......................TFWRTCMMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQV---KNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQ-----NNETYGFHVDGAVRSHPQNGWMR------------DLSATLFLSDPQSYDGGELVVNDTF--------------------GQHRVKLPAGDLVLYPSSSLHCVTP-VTRGVRVA 182
5 -14.600[B] KOG3844 Predicted component of NuA3 histone acetyltransferase complex  ali follow..  8  19ISLEEDKIKGMFNPKIWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLR-QILYSKQYRDFFGYVTKAGKLSTDMSINTYTKGCHLLTHDDV------------------GSRRISFILYLPDPDR-SHYGGGLRLFPSI-------------LPNVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHR.. 238
6 -14.500[L] COG3145 Alkylated DNA repair protein  ali follow..  11  5..........................PKGVRHMPAYLSRAIQDALVEDVRSIVQQAPLFVPAMPRTGKEMSVRMTNCGPLYQPTHPLTGEPWPPIPES--LLDLWRQVSGYPNPPEACLINFYTADAKMGLHQDRD--------------EADFSAPVVSVSL-----------GDDCLFRVGQTTR---------------DGATKSFRLKSGDVVVLGGEGFHGNGGRINLTLRRV 201
7 -13.100[O] COG3751 Predicted proline hydroxylase  ali follow..  9  2GDTQQPTVLDRFAPHALDTSEAERLSRENHVVIRPLINDTLLRNVRKELMENIHFTEKVTDIYRVWQTGDLANLDGLDKKEQNMLKYLRQ-VRDALYSEEFRSHVQKITGCGPLKDLSVNVYSKGC-----HDDV---------------------GTRCISYILYLVEPDEGGGALRLFPTL-------------QPSFPAADFCHSIPPQWNQLSFFPGHSFHDVEEVYVDKPR.. 221
8 -12.000[A] KOG2731 DNA alkylation damage repair protein  ali follow..  9  204TSIKDWILADETNRETVEVSNKHKVIRPGMVLLKDFLTPDIQVDIVKTCRELGVKPQTKYRKNTDIDSKAPEIPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFY-----SETGRLGLHQDRD-------------------ESEESIARGLPIVSFSIGDSAEFLYGEKRD-----------------VEEAQGVILESGDVLIFGGESFHGGRLNLT---RHF 449
9 -10.900[E] KOG1591 Prolyl 4-hydroxylase alpha subunit  ali follow..  13  303QELRCRYSRGNHPYRFLAPLKLEEHSLDPYVATHDILSPGKISQLREMAVPRMHRSTVNPLPGGQLKKSAFRVSKNAWLAYESHPTMV-----------GMLRDLKDATGLDTTFCEQLQVANYGGGHYEPHWDF-----------RDPNHYPAEEGNRIATAIFYLSEV--EQGGATAFPFLD----------------------IAVKPQLGNVLFWDYRTKHAGCP......... 497
10 -10.800[S] KOG4459 Membrane-associated proteoglycan Leprecan  ali follow..  9  461...................MNSKLLNGSQRVVMDGVISDHECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGPLQSAHLYYNV--TEKVRRIMESYFRLDTPLAIEEVQAERKDDSHPVHVDNCILNAETLVCVKEPPAYTF-----DYSAILYLNG-DFDGGNFYFTELDAK------------------TVTAEVQPQCGRAVGFSSENPHGVKA-VTRGQR.. 669
11 -10.400[BT] KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain  ali follow..  10  91DGFSFDNGNVERRRNISLDEFSKEYDAKKPVLLSGLADSDQLSEKYGEVPFRISQRSPNKISMKFKDYIAQRDEDPLYVFDDKFGEAAPELLKDYSVPHLFQEDWFEILDKESRPPYRWLIVGPERSGASWHVD-----------------------PALTSAWNTL------CGRKRLYPPGKVPLGVTVHVNEDEGDVADEDKPIECTLLPGETIYVPSGWWHCI--NLEPT.... 328
12 -9.830[S] COG2850 Uncharacterized conserved protein  ali follow..  11  12................WPDFLERHWQKRPVVLFIDPISPDELAGLAMES------DSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHW--HEPTAALMRPF---DWRIDDLMISFSVPGGGVGPHLDQY---------------------------VFIIQ-----------GTGRRRWRVGEKLQMKQHCPHPDLEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSV 203
13 -9.680[BT] KOG2132 Uncharacterized conserved protein, contains JmjC domain  ali follow..  9  176PDVKLEKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYC-ITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFP------------------KFAKAPFLSCILSPGEILFIPVKYWH............. 400
14 -9.210[I] KOG2508 Predicted phospholipase  ali follow..  11  20...IGSSVVELDRIPTALEFCREFYSKNQPVVIRKALNWPAIGKWTPKYLIEALGDRSVDVAITPNGYADGETKMKLSEVVRRLDDPTGAVHYIQKQNSNLSVDLPELAADNKPPDAVNFWLGDERAVTSMHKDPYVLIPPHQLSCVPRGIYPTGVYKTSDSGQFYIEPLRDEEGSDQFTEWV---SVDPLSPDLAKYPEYARAKPLKVRVHAGDILYLPNYWFH............. 278
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.