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Query: PF15029.6; H0VXD9_CAVPO/9-242; Transmembrane protein 174, from PfamA32U

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst DDFSLNVFSLTPYTPSTADIQVSDDDKAGATLLFSGIFLGLVGITFTVMGWIKYQSVSHFEWTQLLGPILLSVGVTFILIAVCKFKMLSCQLCKESEERVPDSEQTSGGQSFVFTGINQPITFHGATVVQYIPPPYGSQEPMAMNTAYLQSMVNPCGLLPSGGAAGAMPSPPQYCTICPQDNAAFVESEDYSSITDGRNSRSSLGADRLGEMQLEEEDYARFSSPPPYEEIYALLast
1 -9.490[S] KOG4823 Uncharacterized conserved protein  ali follow..  25  25...........PASGATWNVQVVRGKMSSKCLLILGLTLMLLGAGMATLGYY-KNDLKGFHLNNFVGPIVMGFGG-FIVVASC---VMTFEARDSAAKVVPARLRAGGGGS........................................................................................................................... 145
2 -7.600[S] COG2149 Predicted membrane protein  ali follow..  7  18........................NERTFLAWIRTSLGFLAAGVGLDQL----APDFATPVIRELLALLLCLFAGGLAIYGYLRW..................................................................................................................................................... 74
3 -7.270[E] COG1280 Putative threonine efflux protein  ali follow..  11  15......FVSITPGMNM-LTLGMSVGYRRTLWMMVGELLGVALVAVSAVVG------AAVMLRYPDIFTLFKIVGASYLVLGVQMWRSRGKLAINIEQENTYQGSDWGLLVQGFVTAIANPWAFMVSLLPPFIDQSLSLAPQ............................................................................................. 149
4 -7.220[U] COG5120 Membrane protein involved in Golgi transport  ali follow..  17  3.....................LSDLQKIGVGTTALGFLFMIMGIFM------------------FFDGPLLSLGNLLLVFGFFMI---------SKSVSFFLRKDRMLGSISFFSGL---LTLFHFPIIGFFVECLGFF............................................................................................... 94
5 -7.100[P] KOG1743 Ferric reductase-like proteins  ali follow..  23  3.....................LTEAQKFGVAFTFGGFLFFLFGIFTF------------FDRALLLGNILFLIGVFLIIGSQKTYIFFT-------------RPNKRRGSLFFLVGA---LILLKWTFLGFIIESLGIIG.............................................................................................. 95
6 -6.610[S] COG1742 Uncharacterized conserved protein  ali follow..  20  28.........................GKSPAWAVLGVLSLVIFALLLTRIE------------AGAAGRAFAAYGGVYIIASLAWMQVV--------EGARPDRWDLIGG-----------ICLAGAALILFGP..................................................................................................... 105
7 -6.540[S] COG1860 Uncharacterized protein conserved in archaea  ali follow..  12  2..............PYRGTLVMLMNEEVNKIITLCGKDWAKIGVEFIFLG-----GKQECENCKIKKTCLLKEGAKYKIVGLRDGAVQEC-PLHDEGVVAVEVVELP-----IIALVDSKIAVEGAKIH......................................................................................................... 106
8 -6.440[S] COG3671 Predicted membrane protein  ali follow..  22  2..............SDTAVAPRAEEDKILPAVVYGGFTNGLTFFVGLIVAYVNRDAASHYTFA-LIGLLLTIFGAPLSLLLV........................................................................................................................................................ 88
9 -6.270[H] COG0314 Molybdopterin converting factor, large subunit  ali follow..  12  8.......VGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRN--GDSVKALTLEHYPGMTEKALAEIVDEARLWPGDEIVFIGVTS----------------AHRSSAFEAGQFIMDYLKTRAPF............................................................................................................... 124
10 -6.230[S] COG4329 Predicted membrane protein  ali follow..  14  43...............SSAGFPPDSLENLRLNTFFDGLFYVFVVLGLIVLWRRGRRRPLLWSAKLIAGTFLIGFGGFNLIEGTVNHQILGLHHVN---ETVSRDQWVYWDTGFLLWGA---MLIAGWVLYR........................................................................................................ 156
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 3 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;