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current user: public |
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Query: PF15099.6; H9H1Z7_MELGA/1-128; Phosphoinositide-interacting protein family, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . | |||||||
# | Score | Template | Links and tools | %id | First | PPSPNGSLKSPPSKELLTSNTASTLCISSRSESVWTNTSRSKWDIYHKPIIVMSVGAAVFLFGTVITTLSCFEIKNNEVYKMCGPAFLSMGLMLLVCGLVWIPIIRKKQKQRQKSQFLQSLRSFFFNR | Last |
1 | -9.870 | [S] KOG4753 Predicted membrane protein | ali follow.. | 17 | 53 | PKGYNKYAEDTTSRDSDSLIQEYGNLPTEETNTYCWRHPRENWRTVLAAFTLLVVGTGLFVMGTFAIADPQNTSQ--------GVVFFVAGLICFIPGAYHVVYIWLAAKGYRGFDF-YHLPLF.... | 169 |
2 | -7.820 | [S] COG5373 Predicted membrane protein | ali follow.. | 12 | 823 | .............................QGQNVADWKGFLQGETYTYSVVWLVLGVLLLVAGVAVLKVFLVDMSNLEFLRAL--SFIGLGAVLIGIGRFYQKILSGSAGNAGEGA............ | 925 |
3 | -7.580 | [O] KOG2090 Metalloendopeptidase family - mitochondrial intermediate peptidase | ali follow.. | 14 | 773 | .............................MSEEGAAKAEEQRQNENAFLLTWLGLGIVILIEGIILAASGFLPEELDKLFKYVYPVF-TPSVVLFVAGTTAYGVLKYIQNEKMKGQ............ | 859 |
4 | -7.300 | [S] COG4317 Uncharacterized protein conserved in bacteria | ali follow.. | 15 | 5 | ..................................................MTMKMYLLSLGAGLLVGVIYSL----LNVRSPAPPVIALVGLLGILVGEQAVPLVKR..................... | 57 |
5 | -7.220 | [S] COG2363 Uncharacterized small membrane protein | ali follow.. | 16 | 69 | ....................................................FYWSSVFLALGTVLGSLYCLALSHLRLWAYITP----VGGVSFLVG--WALLLIGAIRMKRKGA............ | 128 |
6 | -7.130 | [S] COG5528 Predicted integral membrane protein | ali follow.. | 18 | 46 | ..................................................IVVIADFLFTATAVVLQPVTGIALAWNVGYSLAEGWILLSLLLYVVTGAFWLPVVWMQMEMRRLAE............ | 111 |
7 | -6.650 | [S] COG4353 Uncharacterized conserved protein | ali follow.. | 17 | 69 | ...........................................KIYCALHRLMSPGDILYV------EYVDDRETFIALQKGEAPEATRLGALLRKCGFKIVKNWYHPEGGLEGGMKLQAVK...... | 141 |
8 | -6.610 | [O] COG1333 ResB protein required for cytochrome c biosynthesis | ali follow.. | 16 | 561 | ...............................................................LQLDGFSEVRSSGLQMTRSPGALLVYLGSVLLVLGTAWVLFSDGKSSARSERDLQKEFPKH.... | 636 |
9 | -6.600 | [S] KOG3472 Predicted small membrane protein | ali follow.. | 7 | 94 | .....................KDVSDPKEQVDSQAFADVANRIHFLHSFAMMAVFTGTLMITGMMLGCMYYRALTGEKRLQPYAT----VGGFCLMAA--WLSLV....................... | 180 |
10 | -6.480 | [O] KOG1815 Predicted E3 ubiquitin ligase | ali follow.. | 20 | 471 | STSSKSTGCSSKTRELVDPRQGTKPELIVCNCTMHTLEEKPKLHAHSGILILLSCVYAIWIIGFVTS-------------------FL---LMYSV-----------KEYEKDEQRRVKPIKSHFLH. | 564 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. |